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Report for CCDS70639.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70639.1 Public Mus musculus 15 Eef1d 23 108 98 CCDS HistoryNCBI Gene:66656Re-query CCDS DB by CCDS ID:70639.1Re-query CCDS DB by GeneID:66656See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70639.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000089680.9 ENSMUSP00000087109.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000089680.9Link to Ensembl Protein Viewer:ENSMUSP00000087109.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000089680Re-query CCDS DB by Protein ID:ENSMUSP00000087109
Original member NCBI NM_001285434.1 NP_001272363.1 Updated not alive Link to Nucleotide Sequence:NM_001285434.1Link to Protein Sequence:NP_001272363.1Re-query CCDS DB by Nucleotide ID:NM_001285434Re-query CCDS DB by Protein ID:NP_001272363
Current member NCBI NM_001285434.2 NP_001272363.1 Accepted alive Link to Nucleotide Sequence:NM_001285434.2Link to Protein Sequence:NP_001272363.1Re-query CCDS DB by Nucleotide ID:NM_001285434Re-query CCDS DB by Protein ID:NP_001272363Link to BLAST:NP_001272363.1

Chromosomal Locations for CCDS 70639.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75895553 75895591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75895732 75895926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75896243 75896464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75896640 75896740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75896820 75896919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75897226 75897282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75901132 75901248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (831 nt):
ATGGCTACAAACTTTCTAGCGCATGAGAAGATCTGGTTTGACAAGTTTAAATATGATGATGCAGAAAGGA
GATTCTATGAGCAGATGAACGGGCCTGTGACCTCCGGCTCCCGCCAGCTCAAGGTGATGCTGCCCAACTC
CCCTGAGGCCCTGGGCCAGGCCACCCCTGGGACTAGCTCAGGCCCTGGAGCCTCCAGTGGACCTGGTGGA
GACCACAGTGAGCTCATTGTGAGGATTACCAGTCTGGAAGTGGAGAACCAGAACCTTCGAGGCGTGGTGC
AAGATTTGCAGCAGGCCATTTCCAAGTTGGAGGCCCGGCTGAGCTCTCTAGAGAAGAGTTCACCTACTCC
CCGAGCCACGGCCCCACAGACCCAACATGTCTCTCCTATGCGTCAAGTGGAGCCCCCAACCAAGAAAGGA
GCCACACCAGCAGAGGACGATGAGGACAAGGACATTGACCTGTTCGGCAGTGACGAGGAGGAAGAAGATA
AGGAGGCTGCCCGACTACGGGAGGAGAGGCTACGCCAGTACGCAGAGAAGAAGGCCAAGAAGCCCACACT
GGTGGCCAAATCCTCCATCCTTTTGGATGTTAAACCTTGGGATGATGAGACTGACATGGCCCAGCTAGAG
ACTTGTGTGCGTTCCATCCAATTGGACGGGCTGGTTTGGGGGGCCTCCAAGCTTGTGCCTGTTGGCTATG
GCATCCGGAAGCTGCAGATCCAGTGTGTGGTGGAGGATGACAAAGTGGGCACCGACTTGCTCGAGGAGGA
GATCACCAAATTTGAGGAGCATGTGCAGAGTGTCGACATCGCAGCTTTCAACAAGATCTGA

Translation (276 aa):
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVTSGSRQLKVMLPNSPEALGQATPGTSSGPGASSGPGG
DHSELIVRITSLEVENQNLRGVVQDLQQAISKLEARLSSLEKSSPTPRATAPQTQHVSPMRQVEPPTKKG
ATPAEDDEDKDIDLFGSDEEEEDKEAARLREERLRQYAEKKAKKPTLVAKSSILLDVKPWDDETDMAQLE
TCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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