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Report for CCDS7101.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7101.1 Public Homo sapiens 10 FRMD4A 24 110 108 CCDS HistoryNCBI Gene:55691Re-query CCDS DB by CCDS ID:7101.1Re-query CCDS DB by GeneID:55691See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7101.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357447.7 ENSP00000350032.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357447.7Link to Ensembl Protein Viewer:ENSP00000350032.2Re-query CCDS DB by Nucleotide ID:ENST00000357447Re-query CCDS DB by Protein ID:ENSP00000350032
Original member Current member NCBI NM_018027.5 NP_060497.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018027.5Link to Protein Sequence:NP_060497.3Re-query CCDS DB by Nucleotide ID:NM_018027Re-query CCDS DB by Protein ID:NP_060497Link to BLAST:NP_060497.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060497.3 1039 Q9P2Q2 1039 100% 0 0

Chromosomal Locations for CCDS 7101.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 13651905 13651974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13654416 13654512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13656636 13657522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13659323 13659490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13660316 13660553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13663453 13663509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13666097 13666325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13670406 13670528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13674911 13675044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13693898 13694039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13701340 13701478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13707037 13707113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13737844 13737930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13740194 13740251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13740512 13740577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13747736 13747819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13761647 13761669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13762624 13762680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13782922 13783006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13796496 13796588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13810814 13810908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13858847 13858912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14330058 14330102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3120 nt):
ATGGCAGTGCAGCTGGTGCCCGACTCAGCTCTCGGCCTGCTGATGATGACGGAGGGCCGCCGATGTCAAG
TACATCTTCTTGATGACAGGAAGCTGGAACTCCTAGTACAGCCCAAGCTGTTGGCCAAGGAGCTTCTTGA
CCTTGTGGCTTCTCACTTCAATCTGAAGGAAAAGGAGTACTTTGGAATAGCATTCACAGATGAAACGGGA
CACTTAAACTGGCTTCAGCTAGATCGAAGAGTATTGGAACATGACTTCCCTAAAAAGTCAGGACCCGTGG
TTTTATACTTTTGTGTCAGGTTCTATATAGAAAGCATTTCATACCTGAAGGATAATGCTACCATTGAGCT
TTTCTTTCTGAACGCGAAGTCCTGCATCTACAAGGAGCTTATTGACGTTGACAGCGAAGTGGTGTTTGAA
TTAGCTTCCTATATTTTACAGGAGGCAAAGGGAGATTTTTCTAGCAATGAAGTTGTGAGGAGTGACTTGA
AGAAGCTGCCAGCCCTTCCCACCCAAGCCCTGAAGGAGCACCCTTCCCTGGCCTACTGTGAAGACAGAGT
CATTGAGCACTACAAGAAACTGAACGGTCAGACAAGAGGTCAAGCAATCGTAAACTACATGAGCATCGTG
GAGTCTCTCCCAACCTACGGGGTTCACTATTATGCAGTGAAGGACAAGCAGGGCATACCATGGTGGCTGG
GCCTGAGCTACAAAGGGATCTTCCAGTATGACTACCATGATAAAGTGAAGCCAAGAAAGATATTCCAATG
GAGACAGTTGGAAAACCTGTACTTCAGAGAAAAGAAGTTTTCCGTGGAAGTTCATGACCCACGCAGGGCT
TCAGTGACAAGGAGGACGTTTGGGCACAGCGGCATTGCAGTGCACACGTGGTATGCATGTCCGGCATTGA
TCAAGTCCATCTGGGCTATGGCCATAAGCCAACACCAGTTCTATCTGGACAGAAAGCAGAGTAAGTCCAA
AATCCATGCAGCACGCAGCCTGAGTGAGATCGCCATCGACCTGACCGAGACGGGGACGCTGAAGACCTCG
AAGCTGGCCAACATGGGTAGCAAGGGGAAGATCATCAGCGGCAGCAGCGGCAGCCTGCTGTCTTCAGGTT
CTCAGGAATCAGATAGCTCGCAGTCGGCCAAGAAGGACATGCTGGCTGCCTTGAAGTCCAGGCAGGAAGC
TCTGGAGGAAACCCTGCGTCAGAGGCTGGAGGAACTGAAGAAGCTGTGTCTCCGAGAAGCTGAGCTCACG
GGCAAGCTGCCAGTAGAATATCCCCTGGATCCAGGGGAGGAACCACCCATTGTTCGGAGAAGAATAGGAA
CAGCCTTCAAACTGGATGAACAGAAAATCCTGCCCAAAGGAGAGGAAGCTGAGCTGGAACGCCTGGAACG
AGAGTTTGCCATTCAGTCCCAGATTACGGAGGCCGCCCGCCGCCTAGCCAGTGACCCCAACGTCAGCAAA
AAACTGAAGAAACAAAGGAAAACCTCGTATCTGAATGCACTGAAGAAACTGCAGGAGATTGAAAATGCAA
TCAATGAGAACCGCATCAAGTCTGGGAAGAAACCCACCCAGAGGGCTTCGCTGATCATAGACGATGGAAA
CATTGCCAGTGAAGACAGCTCCCTCTCAGATGCCCTTGTTCTTGAGGATGAAGACTCTCAGGTTACCAGC
ACAATATCCCCCCTACATTCTCCTCACAAGGGACTCCCTCCTCGGCCACCGTCGCACAACAGGCCTCCTC
CTCCCCAGTCCCTGGAGGGACTCCGACAGATGCACTATCACCGCAACGACTATGACAAGTCACCCATCAA
GCCCAAAATGTGGAGTGAGTCCTCTTTAGATGAACCCTATGAGAAGGTCAAGAAGCGCTCCTCTCACAGC
CATTCCAGCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTGCGGAAGCCGGCGGAGGAAGCAACTCCT
TGCAGAACAGCCCCATCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCT
GCGGGTCCGGAGTCCCCACTACGTCCATTCCACGAGGTCGGTGGACATCAGCCCCACCCGACTGCACAGC
CTCGCACTGCACTTTAGGCACCGGAGCTCCAGCCTGGAGTCCCAGGGCAAGCTCCTGGGCTCGGAAAACG
ACACCGGGAGCCCCGACTTCTACACCCCGCGGACTCGTAGCAGCAACGGCTCAGACCCCATGGACGACTG
CTCGTCGTGCACCAGCCACTCGAGCTCGGAGCACTACTACCCGGCGCAGATGAACGCCAACTACTCCACG
CTGGCCGAGGACTCGCCGTCCAAGGCGCGCCAGAGGCAGAGGCAGCGGCAGCGGGCGGCGGGCGCACTGG
GCTCAGCCAGCTCGGGCAGCATGCCCAACCTGGCGGCGCGCGGGGGTGCGGGGGGCGCGGGGGGCGCGGG
GGGCGGTGTGTACCTGCACAGCCAGAGCCAGCCCAGCTCGCAGTACCGCATCAAGGAGTACCCGCTGTAC
ATCGAGGGCGGCGCCACGCCCGTGGTGGTGCGCAGCCTGGAGAGCGACCAGGAGGGCCACTACAGCGTCA
AGGCTCAGTTCAAGACGTCCAACTCCTACACGGCGGGCGGCCTGTTCAAGGAGAGCTGGCGCGGCGGCGG
CGGCGACGAGGGCGACACGGGCCGCCTGACGCCGTCGCGATCGCAGATCCTGCGGACTCCGTCGCTGGGC
CGCGAGGGCGCCCACGACAAGGGCGCGGGCCGTGCCGCCGTCTCAGACGAGCTGCGCCAGTGGTACCAGC
GTTCCACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTCCTCGGACAGCGGCTC
GCAGTACAGCACCTCCTCCCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGATGTGC
AAGGCCACGTCAGCTGCCTTACCTCAAAGCCAGAGAAGCTCGACACCGTCAAGTGAAATTGGAGCCACCC
CCCCAAGCAGCCCCCACCACATCCTAACCTGGCAGACTGGAGAAGCAACAGAAAACTCACCCATTCTGGA
TGGGTCTGAGTCTCCACCTCACCAAAGTACTGATGAATAG

Translation (1039 aa):
MAVQLVPDSALGLLMMTEGRRCQVHLLDDRKLELLVQPKLLAKELLDLVASHFNLKEKEYFGIAFTDETG
HLNWLQLDRRVLEHDFPKKSGPVVLYFCVRFYIESISYLKDNATIELFFLNAKSCIYKELIDVDSEVVFE
LASYILQEAKGDFSSNEVVRSDLKKLPALPTQALKEHPSLAYCEDRVIEHYKKLNGQTRGQAIVNYMSIV
ESLPTYGVHYYAVKDKQGIPWWLGLSYKGIFQYDYHDKVKPRKIFQWRQLENLYFREKKFSVEVHDPRRA
SVTRRTFGHSGIAVHTWYACPALIKSIWAMAISQHQFYLDRKQSKSKIHAARSLSEIAIDLTETGTLKTS
KLANMGSKGKIISGSSGSLLSSGSQESDSSQSAKKDMLAALKSRQEALEETLRQRLEELKKLCLREAELT
GKLPVEYPLDPGEEPPIVRRRIGTAFKLDEQKILPKGEEAELERLEREFAIQSQITEAARRLASDPNVSK
KLKKQRKTSYLNALKKLQEIENAINENRIKSGKKPTQRASLIIDDGNIASEDSSLSDALVLEDEDSQVTS
TISPLHSPHKGLPPRPPSHNRPPPPQSLEGLRQMHYHRNDYDKSPIKPKMWSESSLDEPYEKVKKRSSHS
HSSSHKRFPSTGSCAEAGGGSNSLQNSPIRGLPHWNSQSSMPSTPDLRVRSPHYVHSTRSVDISPTRLHS
LALHFRHRSSSLESQGKLLGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTSHSSSEHYYPAQMNANYST
LAEDSPSKARQRQRQRQRAAGALGSASSGSMPNLAARGGAGGAGGAGGGVYLHSQSQPSSQYRIKEYPLY
IEGGATPVVVRSLESDQEGHYSVKAQFKTSNSYTAGGLFKESWRGGGGDEGDTGRLTPSRSQILRTPSLG
REGAHDKGAGRAAVSDELRQWYQRSTASHKEHSRLSHTSSTSSDSGSQYSTSSQSTFVAHSRVTRMPQMC
KATSAALPQSQRSSTPSSEIGATPPSSPHHILTWQTGEATENSPILDGSESPPHQSTDE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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