NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS71194.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71194.1 Public Mus musculus 2 Zmynd8 23 108 98 CCDS HistoryNCBI Gene:228880Re-query CCDS DB by CCDS ID:71194.1Re-query CCDS DB by GeneID:228880See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 71194.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000170272.7 ENSMUSP00000128680.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000170272.7Link to Ensembl Protein Viewer:ENSMUSP00000128680.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000170272Re-query CCDS DB by Protein ID:ENSMUSP00000128680
Original member Current member NCBI NM_001281926.1 NP_001268855.1 Accepted alive Link to Nucleotide Sequence:NM_001281926.1Link to Protein Sequence:NP_001268855.1Re-query CCDS DB by Nucleotide ID:NM_001281926Re-query CCDS DB by Protein ID:NP_001268855Link to BLAST:NP_001268855.1

Chromosomal Locations for CCDS 71194.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 165785590 165785738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165787164 165787247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165791905 165791971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165792804 165792967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165794395 165794634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165796083 165796161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165797934 165798014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165805187 165805377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165807675 165807929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165812349 165812858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165815317 165815469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165820542 165820688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165828208 165828689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165833309 165833424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165834890 165834967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165837281 165837336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165838812 165838899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165839998 165840090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165842764 165842877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165846021 165846164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165852000 165852148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165875705 165875729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3465 nt):
ATGGATATCTCTACTCGCTCCAAAGATCCTGTCTCTACAGAGAAAACGGCCCCGAAACGGAGGTTCCCCA
GCCCTCCACATTCCTCCAATGGCCATTCGCCCCAAGACTCATCCACGAGCCCCATTAAAAAGAAAAAGAA
ACCCGGCTTACTCAACAGTAGCAATAAGGAACAGGACGGACGGAATGACTTCTATTGCTGGGTTTGTCAC
CGGGAAGGACAAGTCCTTTGCTGTGAGCTCTGTCCCCGGGTTTATCACGCTAAGTGTCTGAGACTGACAT
CGGAGCCAGAGGGGGACTGGTTTTGTCCTGAATGTGAGAAGATTACAGTAGCAGAATGCATCGAGACGCA
GAGCAAAGCCATGACCATGCTGACCATTGAACAACTGTCCTACCTGCTCAAGTTTGCCATTCAGAAAATG
AAGCAGCCAGGGACGGATGCATTCCAGAAGCCTGTTCCATTGGAGCAACACCCTGACTATGCAGAATATA
TTTTCCACCCCATGGACCTTTGTACATTGGAAAAGAATGCAAAAAAGAAGATGTACGGCTGCACAGAAGC
CTTCCTGGCCGATGCCAAGTGGATCCTGCACAACTGCATTATTTATAATGGGGGAAATCACAAGTTGACG
CAAATAGCAAAAGTCGTCATCAAAATCTGTGAGCACGAGATGAATGAAATCGAAGTCTGTCCAGAATGTT
ATCTTGCAGCTTGCCAAAAACGAGACAACTGGTTCTGTGAGCCCTGTAGCAATCCGCACCCTTTGGTCTG
GGCAAAACTGAAAGGATTTCCATTCTGGCCAGCGAAAGCTCTGAGGGACAAAGACGGGCAGGTTGACGCC
CGTTTCTTTGGACAACATGACAGAGCCTGGGTTCCAGTCAATAATTGCTACCTCATGTCTAAAGAAATCC
CCTTTTCTGTGAAAAAGACTAAAAGTATCTTCAACAGCGCCATGCAAGAGATGGAAGTTTACGTGGAGAA
CATACGGAGGAAGTTTGGGGTTTTTAATTACTCCCCGTTCAGGACGCCCTACACGCCCAACAACCAGTAC
CAAATGCTGCTGGATCCCAGCAACCCCAGCGCGGGCACAGCCAAGACAGACAAACAGGAGAAGGTGAAGC
TTAATTTTGACATGACAGCGTCCCCCAAGATCCTTCTGAGCAAGCCCCTTCTGAGCGGGGGTGCCGGCCG
CAGGATCTCCCTGTCCGACATGCCTCGCTCCCCCACCAGTACGAACTCTTCCGTGCACACGGGCTCCGAT
GTGGAGCAGGACCCCGAGAAGAAGGCCCCGTCCAGCCACTTCAGCGCAAGCGAGGAGTCCATGGACTTCC
TTGATAAGAGCACAGCTTCTCCAGCCTCCACCAAGACGGGGCAAGCCGGGAGCTTGTCTGGCAGCCCAAA
GCCTTTCTCTCCGCAAGCGCCGACACCCATCATGACAAAACCCGACAAGACTTCCACCTCCACCACCGGG
AGCATCCTGAACCTGAACTTGGATCGAAGCAAGGCCGAGATGGACCTGAAGGAGCTGAGCGAGTCGGTCC
AGCAGCAGTCAGCCCCCGTCCCTCTCATCTCTCCCAAGCGGCAGATTCGAAGCCGGTTCCAGCTCAACCT
GGACAAGACCATAGAGAGTTGCAAAGCACAGCTAGGCATAAATGAGATCTCAGAGGATGTTTATACAGCC
GTGGAGCACAGCGATTCCGAGGACTCCGAAAAGTCGGAGAGCAGCGACAGCGAGTACGTCAGCGATGAGG
AACAGAAGCCCAAGAATGAGCCCGAGGACCCCGAGGACAAAGAGGGGAGTCGGGTGGACAAAGAGGCCCC
TGCCATCAAAAGGAAGCCCAAACCCACAAACCAGGTAGAGGTCAAAGAGGAAGCGAAGAGCAACTCTCCT
GTCAGCGAGAAGCCGGACCCCACACCCGCCAAGGACAAGGCCAGCCCAGAGCCTGAGAAGGACTTTGTAG
AGAAAGCAAAGCCATCACCTCATCCCACAAAGGACAAACTGAAAGGAAAGGATGAAACGGATTCTCCCAC
AGTGCACTTGGGCTTGGATTCGGACTCGGAGAGCGAACTTGTCATAGACTTAGGAGAGGATCCTTCTGGG
AGGGAGGGTCGAAAAAACAAGAAAGATCCCAAGGTGCCGTCGCCTAAGCAAGACGCTATAGGTAAACCGC
CACCGTCGTCCACTTCGGCGGGCAACCAGTCTCCCCCAGAGACACCGGTACTCACCCGCTCAGCCACCCA
AGCACCCGCGGCTGGGGTCACCGTGGCCGCCGCCACCACCAGCACGATGTCTACCGTCACAGTCACGGCA
CCGGCCACCGCCGTCACGGGAAGCCCGGTGAAGAAGCAGAGGCCGCTCTTACCGAAGGAGACTGTCCCAG
CTGTGCAGCGGGTCGTGTGGAACGCATCAACTGTCCAGCAGAAGGAGGTCACCCAGAGCCCATCCACGTC
CACCATCACGCTGGTGACCAGCACACAGCCGGCAGCCCTGGTCAGCAGTTCGGGCTCAGCAAGCACCCTG
GCGTCTGCAATCAATGCCGACCTTCCCATTGCCACCGCCTCGGCCGACGTGGCCGCAGACATTGCCAAGT
ACACCAGCAAAATGATGGATGCCATAAAGGGGACGATGACAGAAATCTACAATGACCTCTCCAAGAACAC
CACTGGGAGCACAATAGCTGAGATTCGAAGGCTGAGGATTGAGATTGAGAAACTGCAGTGGCTGCACCAG
CAGGAGCTCGCTGAGATGAAGCACAACCTGGAGTTGACCATGGCCGAGATGCGGCAGAGCCTGGAACAGG
AGCGGGATCGGCTCATTGCCGAGGTGAAAAAGCAACTGGAGCTGGAGAAGCAGCAGGCGGTGGACGAGAC
CAAGAAGAAGCAGTGGTGTGCCAACTGCAAGAAGGAGGCCATTTTCTACTGCTGCTGGAACACCAGCTAC
TGTGACTACCCCTGTCAGCAGGCCCACTGGCCCGAGCACATGAAGTCCTGTACCCAGTCGGCGACTGCCC
CTCAGCAGGAAGCAGATGCCGAGGCAAGCACAGAAACAGGAAATAAGTCATCGCAGGGCAACTCCTCCAA
CACACAGTCAGCACCTTCAGAACCGGCCAGCGCCCCCAAAGAGAAAGAGGCGCCAGCGGAGAAGAGCAAG
GACAGTAGTAACTCGACCCTGGATCTTTCCGGCTCCAGAGAGACGCCCTCCTCTATGCTCTTAGGCTCCA
ATCAAAGCTCTGTTAGCAAGAGGTGTGACAAGCAGCCTGCCTATACCCCAACCACTACAGACCACCAGCC
GCACCCCAACTACCCAGCCCAGAAGTACCATTCCCGGAGCAGCAAGGCAGGTTTGTGGAGCAGCAGCGAG
GAGAAGCGAGCGTCATCCCGCTCTGAGCACAGTGGAGGGACCAGCACGAAGAACCTCATGCCCAAAGAGT
CCCGGGAGTCTCGGCTAGATGCCTTCTGGGACTAG

Translation (1154 aa):
MDISTRSKDPVSTEKTAPKRRFPSPPHSSNGHSPQDSSTSPIKKKKKPGLLNSSNKEQDGRNDFYCWVCH
REGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKM
KQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLT
QIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDA
RFFGQHDRAWVPVNNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNNQY
QMLLDPSNPSAGTAKTDKQEKVKLNFDMTASPKILLSKPLLSGGAGRRISLSDMPRSPTSTNSSVHTGSD
VEQDPEKKAPSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQAPTPIMTKPDKTSTSTTG
SILNLNLDRSKAEMDLKELSESVQQQSAPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTA
VEHSDSEDSEKSESSDSEYVSDEEQKPKNEPEDPEDKEGSRVDKEAPAIKRKPKPTNQVEVKEEAKSNSP
VSEKPDPTPAKDKASPEPEKDFVEKAKPSPHPTKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDPSG
REGRKNKKDPKVPSPKQDAIGKPPPSSTSAGNQSPPETPVLTRSATQAPAAGVTVAAATTSTMSTVTVTA
PATAVTGSPVKKQRPLLPKETVPAVQRVVWNASTVQQKEVTQSPSTSTITLVTSTQPAALVSSSGSASTL
ASAINADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQ
QELAEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSY
CDYPCQQAHWPEHMKSCTQSATAPQQEADAEASTETGNKSSQGNSSNTQSAPSEPASAPKEKEAPAEKSK
DSSNSTLDLSGSRETPSSMLLGSNQSSVSKRCDKQPAYTPTTTDHQPHPNYPAQKYHSRSSKAGLWSSSE
EKRASSRSEHSGGTSTKNLMPKESRESRLDAFWD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH