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Report for CCDS71671.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71671.1 Public Mus musculus 5 Mphosph9 23 108 98 CCDS HistoryNCBI Gene:269702Re-query CCDS DB by CCDS ID:71671.1Re-query CCDS DB by GeneID:269702See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71671.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000184951.7 ENSMUSP00000138982.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000184951.7Link to Ensembl Protein Viewer:ENSMUSP00000138982.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000184951Re-query CCDS DB by Protein ID:ENSMUSP00000138982
Original member NCBI NM_001277867.1 NP_001264796.1 Updated not alive Link to Nucleotide Sequence:NM_001277867.1Link to Protein Sequence:NP_001264796.1Re-query CCDS DB by Nucleotide ID:NM_001277867Re-query CCDS DB by Protein ID:NP_001264796
Current member NCBI NM_001277867.2 NP_001264796.1 Accepted alive Link to Nucleotide Sequence:NM_001277867.2Link to Protein Sequence:NP_001264796.1Re-query CCDS DB by Nucleotide ID:NM_001277867Re-query CCDS DB by Protein ID:NP_001264796Link to BLAST:NP_001264796.1

Chromosomal Locations for CCDS 71671.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 124255017 124255118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124258946 124259014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124259968 124260215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124260935 124261035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124261922 124262042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124262889 124263035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124265317 124265495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124267039 124267173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124283634 124283735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124285469 124285533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124286377 124286424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124290846 124291061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124292320 124292407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124297555 124297710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124298622 124299079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124304174 124304277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124306953 124307046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124312705 124312831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124315373 124315896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124316082 124316171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124320845 124320998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124324874 124324980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3435 nt):
ATGGAGGATTTTGACTTGGTGGAAAATTTACAAAAAACGTCACCTTCTGTAGAATCTGATATTAAAAGCG
CTCCCCAATCCCTTGGGTTGAGCTTGCATGCTAATAGAAGTAGTCCCCACCTTAGTACAAATGGGGTGTC
CTCTTTCTCAGGGAAGACCGGGCCACCTGTCATTCAAGGGACAGTGGAAGTCCTCACTGCTTTAAGACAA
GACCTACAGAACAGTGGCCGGACTGACTCAGAACTTTGGAAGAGTTGCGAGGCCAGGTGGTTGCAGCTCT
TCAGTGTGGTTGAGCAGCACTGCCAGGAGCAGATTGTCGCCCAGCAGGAGCAGTTCCATAGGCAGATCCG
GCGAATACAGGAGGAGATCCGGAAGTTAGTGAAACTGCAGCTCAGCCATGCTTCCCGGCCTTCGTGCAGC
AGCAGCTCTGTGAGTGAGCAGGTGTCTGCAGAAACCCAAATGGGCTTCTTTTCTGAGAACAGTGAGAGAA
ATGAGTCTGTTGTCAGTTCCCCAGCGTCCAAGGAACCCGAGACACAGCCAGCATCATCCACATCCTACCC
AGACTGCCATGTGGACAGCAGCTCAGTGAGCAGTGGCTACGGCACCTTCTGCATCCTGGACATGAACACC
CACAAGGCTAAGGAGCCCACCGAGCCCTTGGAGCCGGGGGCAGCTTCCCAGGGGCAGCACCCAGCCTCTG
TGGTGCAGGCACATGGCCCTGCAGGGGGTGCAGCAGCCATAAACTTCTTCACACAGACCCCTGAAGAGCT
TTGTGCCTCTCTAAAGGAAGACGGCTCCACTTTTCCTGGGGAATTTGACCGAAATTTTCTTGGTGAAAAC
AAGATCTCTGAAGTGTACAGTGGGAAAGCAAATAGTGGTAAGTCTGTAACATCCTGGGCACAGAGGCTGA
AGCAGAACCAGTCAAAGCAGGCACATACAGAGGATGACTGCTCAGGACCTAAGCCAGGGAGCGAGCTGAA
CTGGAAGCCTCCAGCTGACACATTTGACCTTGCTGCCGATGCTGCACGTCCTTGTGCCTTTTACATCAAT
AAGCCAGCCGAAAGCCCAAGTTCTTGGTTGTCTGATTCAGGAACAGGGCTGACTTACTGGAAACTGGAGG
AGAAGGACATGTATCACTCTTTGCCTGAAACTTTGGAGAAGACGTTTGCACCATCCCCAGCAGAGAGGCC
CCTGAGCCAGGTCCTGACTCTTGATCCAGGAGCCATACGCATGAAGCCAAAGGAGCATGTCGCAGGGATC
CAAGCCCATGGCTTTCTGCATGCTCTTGACGACAGAATATCCTTTTCCCCAGACTCCGTTCTGGAACCAA
GCCTGTCTCGTCACTCTGACACTGACTCGTCTTCACAAGCAAGTCATAATCCTTCCCAGGTGTCTGGGTT
CTCCAAGTATCCTTCAACCACGAGAGCATCACCTGTGGACACTTGGAAAAACCATGCATTCCAAAGGGAA
AGTAGGACCAGCTCCACCATCCCTTCACGCTACACCATCACTAGCAACGATATCTCAGTCAAAACTGTAG
ACGAAGAGAACACTGTCACAGTGGCCTCAGTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGTGTCCC
AGAATGCATTTCATTGGCTTCCCTGGAAGATCCTGTGATGTTGTCTAAGATCAGGCAGAACCTCAAGGAG
AAGCATGCCCGACACGTGGCCGACCTTCGTGCTTATTATGAGTCGGAGATAAGTAGTCTGAAACAGAAAC
TGGAGGCCAAAGACATTTCTGCCGTTGAAGAGTGGAAGAAGAAAAATGAAATTCTTGCGGACAGGTGTGG
CCAGCTGGATAGTGCATTGAATGAAGCTACTAGTCGAGTGCGCACACTTGAGAAGAACAACAACTTGCTA
GAAATAGAAGTGAGTGACTTGAGAGAACGCTTCAATGCAGCCAGCAGTGCCTCCAAAGTTTTGCAGGAAC
GAATTGAAGAAATGAGGACAAGCAATAAGGAGAAAGATAACACCATCACTCGGCTAAAGTGTCGCCTGCA
GGATCTGGAGGAAGCCTTCGAGAATGCTTACAAGCTCTCAGATGATAAGGAAGCGAGGCTGAGACAAGAA
AACAAGATGTTTCAGGATCTCTTAGGAGAGTACGAATCCCTCGGCAAAGAACACGGGCGAGTAAAGGATA
CATTAAACACAACTGAGAACAAATTGCTTGATGCACACACTCAGATTTCTGACTTGAAAAGGACAATCTC
AAAGCTTGAGGCTCAGGTGAAGCAGGCAGAGCACGAGAGTATGCTGAGTCTTCGCAATGGCGCTAAAGTT
CCCGAGAGGCCGTCCCGGTCCAACTCCGTAGCCACCTCGGATGTCAGCAGGAGGAAGTGGCTGATTCCAG
GAGCGGAGTACTCCATCTTTACTGGGCAGCCTCTGGACCCCAGGGACAGGAAGCTAGATAAGCAGCTGGA
GGAAGCCCTTGTTCCTGGATACCATTCTCCTCCAGAAAAGGACTCTTCACTTGGAAGTTCACCAGCGAGC
CTCCTGGTTAAAAAGAAGAGGGACACTCCGGACACACCACCGATCATCAAGGCTTTAAAGGAACTTGATG
AAGAAAGAGTATTTAAAAGTTGGGGGACACAGACAGAGAAAGAGGATTCTTCAAGTAAATTAGTGAATTC
TCGGCAAACTGAGCCTTCAGTCAATACAGGCCGTTCCCCAGAGAAATGTGCCCAGCAGAGACCGAAGAGA
CAGACTTCGGCTTCACAAAGGTCGTCGTCTCTCCCACCGTCCAGTCGGAAAGCCAACACTCCAACAAAAA
GAGAGATTATGCTAACGCCAGTGACCGTGGCTTATAGTCCTAAGCGGTCTCCTAAAGAAAATCTGTCCCC
TGGATTTAGTCATCTCCTTAGCAAAAATGAAAGCAGTCCAGTTCGATTTGATATCCTTTTGGATGATTTA
GATACCGTTCCTGTGTCCACGTTACAACAAACCACTGCAAAGAAGCAGCTCCAGTTTCTGCTAGATGACT
CAGAAGAAAAAAAGTATTCAGAAAAAAACAGTGATGACCCTGTTAATCCTAGCTCTTGTCCTGAACACTC
ACCAAATGGACTGAAGAAAGTGTCCACGAGACAAGCCTGGGAGAAGAGTAAGTCAGTCAGCCTGGAGCAG
TGTCAGCCGGGATCAGCAGCACCACAGGACAACGGTTTTGAGTATACAGCGAAGATTAGGACCCTAGCTG
AAACGGAGCGATTTTTTGATGAACTTACAAAAGAAAAAGACCAGATTGAGGCAGCACTAAGCCGAATGCC
TTCTCCTGGAGGAAGAATCACTTTACAAACAAGACTCAATCAGGAGGCCTTGGAAGATCGTTTGGAAAAG
ATCAACCGTGAACTGGGCTCAGTTCGAATGACCCTCAAGAAGTTTCATGTTTTGCGCAGCTCTGCAAATC
TTTGA

Translation (1144 aa):
MEDFDLVENLQKTSPSVESDIKSAPQSLGLSLHANRSSPHLSTNGVSSFSGKTGPPVIQGTVEVLTALRQ
DLQNSGRTDSELWKSCEARWLQLFSVVEQHCQEQIVAQQEQFHRQIRRIQEEIRKLVKLQLSHASRPSCS
SSSVSEQVSAETQMGFFSENSERNESVVSSPASKEPETQPASSTSYPDCHVDSSSVSSGYGTFCILDMNT
HKAKEPTEPLEPGAASQGQHPASVVQAHGPAGGAAAINFFTQTPEELCASLKEDGSTFPGEFDRNFLGEN
KISEVYSGKANSGKSVTSWAQRLKQNQSKQAHTEDDCSGPKPGSELNWKPPADTFDLAADAARPCAFYIN
KPAESPSSWLSDSGTGLTYWKLEEKDMYHSLPETLEKTFAPSPAERPLSQVLTLDPGAIRMKPKEHVAGI
QAHGFLHALDDRISFSPDSVLEPSLSRHSDTDSSSQASHNPSQVSGFSKYPSTTRASPVDTWKNHAFQRE
SRTSSTIPSRYTITSNDISVKTVDEENTVTVASVSQSQLPGTANSVPECISLASLEDPVMLSKIRQNLKE
KHARHVADLRAYYESEISSLKQKLEAKDISAVEEWKKKNEILADRCGQLDSALNEATSRVRTLEKNNNLL
EIEVSDLRERFNAASSASKVLQERIEEMRTSNKEKDNTITRLKCRLQDLEEAFENAYKLSDDKEARLRQE
NKMFQDLLGEYESLGKEHGRVKDTLNTTENKLLDAHTQISDLKRTISKLEAQVKQAEHESMLSLRNGAKV
PERPSRSNSVATSDVSRRKWLIPGAEYSIFTGQPLDPRDRKLDKQLEEALVPGYHSPPEKDSSLGSSPAS
LLVKKKRDTPDTPPIIKALKELDEERVFKSWGTQTEKEDSSSKLVNSRQTEPSVNTGRSPEKCAQQRPKR
QTSASQRSSSLPPSSRKANTPTKREIMLTPVTVAYSPKRSPKENLSPGFSHLLSKNESSPVRFDILLDDL
DTVPVSTLQQTTAKKQLQFLLDDSEEKKYSEKNSDDPVNPSSCPEHSPNGLKKVSTRQAWEKSKSVSLEQ
CQPGSAAPQDNGFEYTAKIRTLAETERFFDELTKEKDQIEAALSRMPSPGGRITLQTRLNQEALEDRLEK
INRELGSVRMTLKKFHVLRSSANL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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