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Report for CCDS72368.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72368.1 Public Mus musculus X Atp1b4 23 108 98 CCDS HistoryNCBI Gene:67821Re-query CCDS DB by CCDS ID:72368.1Re-query CCDS DB by GeneID:67821See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72368.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115134.1 ENSMUSP00000110787.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115134.1Link to Ensembl Protein Viewer:ENSMUSP00000110787.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000115134Re-query CCDS DB by Protein ID:ENSMUSP00000110787
Original member Current member NCBI NM_001290389.1 NP_001277318.1 Accepted alive Link to Nucleotide Sequence:NM_001290389.1Link to Protein Sequence:NP_001277318.1Re-query CCDS DB by Nucleotide ID:NM_001290389Re-query CCDS DB by Protein ID:NP_001277318Link to BLAST:NP_001277318.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277318.1 352 Q99ME6-2 352 100% 0 0

Chromosomal Locations for CCDS 72368.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 38316267 38316329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 38320511 38320760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 38324645 38324773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 38325011 38325115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 38329264 38329460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 38330554 38330610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 38332754 38332849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 38333561 38333722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGAGACGGCAACTCCGCTCCAGAAGGGCTCCCGCCTTTCCTTACGGTTATCGCTACAGACTTGATGATC
AGGATGAAGCGAATCACAACTACTTAGCAGATGAAGAGGAGGAAGCTGAAGAGGAGGCTCAGGTGATGAT
GGTGCCTGGTCTAGAGGAAGAGGAAGAAGAGGAGGAAGGAAAAGAGGAGGAGGAAGAAAGGGAGGAAGAA
GAAGGTCAGGGTCAGTCAACAGGCAGTGCCTGGTGGCGGAAATTGCAGATCGTGAATGAATACCTGTGGG
ACCCGGAGAAAAGGATGTCTCTGGCCCGAACAGGTCTTATTTTAGTCATTTACTTCTTCTTCTATGCCTC
CCTGGCTGCCGTGATCACCCTGTTCATATACATGCTGTTCCTAGCCATCAGTCCTTACATGCCGACCTTC
ACCGAGCAGGTGAAACCTCCTGGAGTTATGATCAGACCCTTCGCTCATAGCCTTAACTTCAACTTCAACG
TTTCTGAACCTGAAACTTGGCAGCGTTACGTGATTAGCCTAAATGGCTTTCTCCAGGGCTATAATGACAG
TCTTCAAGAGGAAATGAATATAGATTGTCCTCCGGGTCGGTACTTCATCCAAGATGGAGATGAAGATGAG
GACAAGAAGGCCTGCCAATTTAAGCGCTCCTTCCTGAAGAATTGCTCTGGGTTGGAGGATCCCACTTTTG
GATACTCTACTGGACAGCCTTGCATCCTCCTCAAGATGAACCGGATTGTAGGCTTCCGTCCTGAGTTTGG
AGATCCTGTGAAGGTGTCCTGCAAAGTTCAGAAAGGTGATGAAAATGACATTCGATCCATCAATTACTAC
CCGGAGTCCGCTTCTTTTGACCTCCGCTACTACCCTTACTATGGCAAACTGACTCATGTTAACTACACCT
CCCCGCTGGTGGCAATGCATTTTACAGATGTGGTGAAGAACCAAGCAGTGCCTGTACAGTGCCAGCTGAA
GGGCAAAGGCATCGTAAATGATGTCATCAATGATCGTTTTGTTGGGAGGATAATCTTTACCCTGAACATA
GAAACCTAG

Translation (352 aa):
MRRQLRSRRAPAFPYGYRYRLDDQDEANHNYLADEEEEAEEEAQVMMVPGLEEEEEEEEGKEEEEEREEE
EGQGQSTGSAWWRKLQIVNEYLWDPEKRMSLARTGLILVIYFFFYASLAAVITLFIYMLFLAISPYMPTF
TEQVKPPGVMIRPFAHSLNFNFNVSEPETWQRYVISLNGFLQGYNDSLQEEMNIDCPPGRYFIQDGDEDE
DKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPEFGDPVKVSCKVQKGDENDIRSINYY
PESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQAVPVQCQLKGKGIVNDVINDRFVGRIIFTLNI
ET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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