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Report for CCDS72455.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
72455.1 |
Public |
Mus musculus |
X |
Shroom2 |
23 |
108 |
98 |
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Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 72455.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000062317.4 |
ENSMUSP00000057500.4 |
Accepted |
alive |
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NCBI |
NM_001290684.1 |
NP_001277613.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001277613.1 |
1481 |
A2ALU4-1 |
1481 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 72455.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4446 nt): ATGGAGGGCGCCGAGCCCCGTGCACGGCCCGAGCGCCTGGCCGAAGCTGAGGCGCCGGCGACCGACGGCG TCCGCCTGGTGGAGGTGCAGCTGAGCGGCGGCGCCCCTTGGGGCTTCACCTTGAAGGGCGGCCGCGAGCA TGGCGAGCCTCTGGTCATCACCAAGATTGAAGAAGGAAGCAAAGCTGCAGCAGTGGACAAGCTACTTGCT GGAGATGAGATAGTGGCCATTAATGATGTGAGTCTCTCAGGGTTCAGACAAGAAGCAATTTGCCTGGTGA AAGGCTCCCACAAGACCCTGAAGCTTGTGGTCAAAAGGAAAAGTGATCCAAGTTGGAGGCCCCACTCCTG GCACGCTACCAAGTACTTTGATGTCCACCCTGAGCCAGCAGCCTCACTGTTTCTGAACACCAGCGGTTCC CCTTCCTGGAAGAGCCAGCACCAGGCTAGTTCTTCCTCTCATGATTTATCTGGCTCATGGGAGCATACAA GCCTACAGCGCACTTCTGACCACTTCAGCTCCATGGGCAGCATAGACAGCCTCGACCACAGCTCCCAACT CTACCCATCTGGACACCTCTCATCTGCCAAGTCCAATAGCAGCATTGACCACCTGGGAGGCCACAGCAAG CGAGACTCAGCTTACGGCTCCTTTTCCACATGCTCCAGCACCCCTGACCACACCTTGCCCAAGGCTGATG CCTCTTCCACTGAGAACATTCTCTATAAAGTTGGCCTTTGGGAGGCCTCCAGACCAGGCAGCAGCCGACA AAGCCAGTCTACAGGTGATCCTCAGGGACTGCAGGACAGGCCATCATGTTTCATACCTAGGGTTCCTGGT AACAGTAGTAAAAGTCCAAGGCCGGAGGATAATGTTGAACCCAAAATAGCCACTCATGGGAGATCCAATT TTGGGCCTGTGTGGTATGTTCCTGACAAGAAAAAAGCCCCTTCTCCCCCACCTCTTGGACTTCCTTTGCG CAGTGATAGCTTTTCTGTGGCAGCCAGGGGCCATGAAAAAGCCCGGGGCCCTCCATTCTCAGACTTGGCC AGTATGCAGCACTTTATCACCCTGCCCCATGTGCAACCCCGGGGGGACCATAGAATGGAAACTACAGATC GTCAGTGGAAGCTCACACACCTAAGCAGTGGAAAAGAAATAGGAAATGTGGGTTACCAGTCAGAAGGCCA CCTGGATTGCCGTTGGCTATGCTCTGATGATAGAGCAGGTAGGCCCTCAGGGCCTCCGGGCAGGCTCCAG TTCTCCGATGTGCACTTTCTGAAGTCTTACCACGGGAGCCAGCACCAACAGCAGTGCAGTGACGAGAGCC CAAGGGCCCCCTCATCACCAAGGGAACTGCTTCATATAACTCCTGGTGGCGGTCTGCAAGAGCCTCCTGA ACCATCTCAGGATGACAACCCTACTCAGGTGAGGTGGCCTGGTTCTGCTCACCAGAAGCTAGATGACAGA GGGCGGAGCCACTATTTTCCTGGGTCCCTCAGGCAGCCTGTACAGGGGAGTGCCCAGGTTGTGATACCCC GAGGTGACTATTGGCATTCAGATACAACTCCTGTGGACCTTGAATATCCTCTCTTACGCCCAGTAGGACA GAGGACCTACCTACAGCAGCATGAGGAGACTCCGGCCTCTCATGAAAAAGAGGGGTATCACCAGCTAAAT GCAGGGATTGAAGGCTGCTGCTCTGGAATCCAAGAGCCTCCTAGAGCCAGCCGCACTGTGAGAACTGGTC TGCAGTGTCCTAGCAATGACTTCAAATTAGTGGATGGAGAGAGTGGGAGAATTTCTCGTCAGAGGACACC CATGCTGCATTCTCTGACCCAAGATGGTACATGGAGACCCGGGAACAGCAAGGATTGTGGAAATGATAAG CCACCACTGTTTGATGCCCAGGTGGGTAAACCCACACGGAGGAGTGACCGTTTTGCCACAACACTGAGGA ATGAGATCCAAATGCGTAGAGCAAAGCTGCAGAAGAGCAAAAGTACAGTGACACTAGCTGGAGACAGTGA AGCTGAAGATTGTGCTGGAGACTGGAGAGCTGATGTGGGGGCTGTCCCAGAAGGTTCCTTCCCCAGCACC TATAAAGAGCACCTGAAGGAGGCCCAGACACGTGTTCTGAAGGCCACCTCTTTCCAACGCCGAGATTTAG ATCCCACCCCAGCAGATCAGTATTCAGGACCATCAGAACACAGGACTTTTGACCACAGTGCCTCATCTTC TTTATCTTCTTTCCCTGGGGAGCCAGACTCTGCCCCACGCTTCTGTGAGACAGGTCTGGCCAAGGCACCC TCTTCTGGAGTTGGTGTACCCCACGTTCTTCGAATTGGAGGCCGGAAACGGTTCACAGCAGAGCAGAAAC TAAAGTCCTATTCTGAGCCAGAGAAAATAAATGAAGTGGGGCTCTCAGGGGACCACCGTCCTCATCCTAC TGTCAGGACACCTGAGGATACAGTGGGTACATTTGCTGACAGGTGGAAGTTTTTTGAGGAAACAAGCAAA TCTCTTCTCCAGAAGGCAGGCCATAGGCAAGTTCACTGTGGGCTCCCTAGAGAGAAGGCTGAGAGGCCAC AGACAGGGCACCATGAATGTGAGAGTACAGAGCCCTGGTTCCAGAAGAGGTCACTGGCCACCTCCTGCGG AGAGATCCTCAGTGATAGAAAAGTAGAAAAGGCCTCAGAGAAATTGAACCCACCCAGAAGGCTTGGAACC TTCGCAGAATATCAAGCATCTTGGAAGGAACAGAAGAAACCTCTGGAAGCCAGGAGTTCTGGACGATACC ATTCAGCAGATGATATTCTGGATGCTGGTCTAGATCAGCAGCAGAGGCCACAGTACATTCATGAGCGGTC TCGTTCATCACCGTCCACAGATCACTACTCACAGGAAGTGCCTGTTGAACCAAACAGGCAGGCAGAGGAC TCTGGTGACCACAAAGAAGCAATTCTCTGTACACTACAAGCTGAGGAGGGATGCTCTGCTCCAAGTGCCC AGCCGCAAGACAGCCAGCATGTGAATGAAGACACAACTTTCCCTCAACCAGAAACCCAGCTCTCTTCCAA GTGTCAACACCTACAGACGTCAGCCATGGAAACTTCTCGCTCCCCTTCGCCTCAGTTTGCCCCACAGAAG CTGACAGATAAACCTCCCCTGCTTATCCATGAAGACAACTCAGCAAGAATCGAGCGGGTGATGGACAACA ACACCACTGTGAAGATGGTGCCCATAAAAATTGTGCACTCAGAAAGCCAGCCCGAGAAGGAGAGTCGTCA GAGTCTCGCGTGCCCAGCTGAGCTGCCCCCACTGCCCAGTGGGCTGGAGAGGGACCAGATCAAGACACTG AGTACATCAGAGCAATGCTACTCCCGCTTCTGTGTGTACACACGACAGGAGGTGGAAGCTCCTCATAGAG CCCGCCCTCCAGAGCCCCGGCCACCCAGCACGCCTGCACCTCCTGTCAGAGATAGCTGTTCCTCCCCTCC CTCACTCAACTATGGGAAGGCCAAGGAGAAAACCATGGATGACTTGAAGTCTGAAGAATTAGCCAGGGAG ATTGTGGGAAAGGACAAGTCTTTGGCTGACATCCTGGACCCCAGTGTGAAGATCAAAACTACCATGGATC TGATGGAGGGAATTTTTCCCAAAGATGAGTACCTCCTAGAGGAAGCTCAGCAGCGGAGAAAGCTGCTCCC CAAAGTCCCCTTACCCAGAGTCACAGAGGACAAGAAACAGGACCCAGGTATGCCAGGGGTTGTGTCCTTG GCCACCAATTCTACCTATTACAGCACATCAGCCCCCAAAGCAGAGCTTCTTATCAAGATGAAGGACCTGC AGGAGCCTGAAGAGTATTCAGCAGGTGACTTGGATCATGACCTTTCTGTTAAGAAGCAAGAGCTCATTGA CAGTATCAGCCGCAAGCTGCAGGTGCTCCGGGAAGCACGTGAGAGCCTGCTGGAAGACATCCAAGCCAAC AATGCTCTTGGGGATGAGGTGGAAGCCATTGTGAAAGATGTCTGCAAGCCCAATGAGTTTGACAAGTTCC GGATGTTCATTGGAGACCTGGACAAAGTGGTGAACCTCCTGCTGTCACTGTCAGGACGCCTGGCCCGTGT GGAAAATGCCCTTAATAATTTAGATGACAATCCTTCTCCTGGAGATCGGCAGTCACTGTTGGAGAAACAG AGAGTCCTAACTCAGCAGCACGAGGATGCCAAGGAGCTTAAAGAGAACCTGGACCGCCGTGAGCGCATTG TGTTCGACATCCTGGCTACCTACCTCAGCGAGGAGAACCTGGCTGACTATGAGCACTTCGTGAAGATGAA GTCAGCTCTCATCATTGAGCAGCGAGAGCTGGAAGATAAAATCCACCTGGGTGAAGAGCAGCTCAAGTGT TTGTTTGACAGCCTACAGCCTGAGAGAAGCAAATGA
Translation (1481 aa): MEGAEPRARPERLAEAEAPATDGVRLVEVQLSGGAPWGFTLKGGREHGEPLVITKIEEGSKAAAVDKLLA GDEIVAINDVSLSGFRQEAICLVKGSHKTLKLVVKRKSDPSWRPHSWHATKYFDVHPEPAASLFLNTSGS PSWKSQHQASSSSHDLSGSWEHTSLQRTSDHFSSMGSIDSLDHSSQLYPSGHLSSAKSNSSIDHLGGHSK RDSAYGSFSTCSSTPDHTLPKADASSTENILYKVGLWEASRPGSSRQSQSTGDPQGLQDRPSCFIPRVPG NSSKSPRPEDNVEPKIATHGRSNFGPVWYVPDKKKAPSPPPLGLPLRSDSFSVAARGHEKARGPPFSDLA SMQHFITLPHVQPRGDHRMETTDRQWKLTHLSSGKEIGNVGYQSEGHLDCRWLCSDDRAGRPSGPPGRLQ FSDVHFLKSYHGSQHQQQCSDESPRAPSSPRELLHITPGGGLQEPPEPSQDDNPTQVRWPGSAHQKLDDR GRSHYFPGSLRQPVQGSAQVVIPRGDYWHSDTTPVDLEYPLLRPVGQRTYLQQHEETPASHEKEGYHQLN AGIEGCCSGIQEPPRASRTVRTGLQCPSNDFKLVDGESGRISRQRTPMLHSLTQDGTWRPGNSKDCGNDK PPLFDAQVGKPTRRSDRFATTLRNEIQMRRAKLQKSKSTVTLAGDSEAEDCAGDWRADVGAVPEGSFPST YKEHLKEAQTRVLKATSFQRRDLDPTPADQYSGPSEHRTFDHSASSSLSSFPGEPDSAPRFCETGLAKAP SSGVGVPHVLRIGGRKRFTAEQKLKSYSEPEKINEVGLSGDHRPHPTVRTPEDTVGTFADRWKFFEETSK SLLQKAGHRQVHCGLPREKAERPQTGHHECESTEPWFQKRSLATSCGEILSDRKVEKASEKLNPPRRLGT FAEYQASWKEQKKPLEARSSGRYHSADDILDAGLDQQQRPQYIHERSRSSPSTDHYSQEVPVEPNRQAED SGDHKEAILCTLQAEEGCSAPSAQPQDSQHVNEDTTFPQPETQLSSKCQHLQTSAMETSRSPSPQFAPQK LTDKPPLLIHEDNSARIERVMDNNTTVKMVPIKIVHSESQPEKESRQSLACPAELPPLPSGLERDQIKTL STSEQCYSRFCVYTRQEVEAPHRARPPEPRPPSTPAPPVRDSCSSPPSLNYGKAKEKTMDDLKSEELARE IVGKDKSLADILDPSVKIKTTMDLMEGIFPKDEYLLEEAQQRRKLLPKVPLPRVTEDKKQDPGMPGVVSL ATNSTYYSTSAPKAELLIKMKDLQEPEEYSAGDLDHDLSVKKQELIDSISRKLQVLREARESLLEDIQAN NALGDEVEAIVKDVCKPNEFDKFRMFIGDLDKVVNLLLSLSGRLARVENALNNLDDNPSPGDRQSLLEKQ RVLTQQHEDAKELKENLDRRERIVFDILATYLSEENLADYEHFVKMKSALIIEQRELEDKIHLGEEQLKC LFDSLQPERSK
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