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Report for CCDS72916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72916.1 Public Homo sapiens 1 MRPL9 24 110 108 CCDS HistoryNCBI Gene:65005Re-query CCDS DB by CCDS ID:72916.1Re-query CCDS DB by GeneID:65005See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72916.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368829.3 ENSP00000357822.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368829.3Link to Ensembl Protein Viewer:ENSP00000357822.3Re-query CCDS DB by Nucleotide ID:ENST00000368829Re-query CCDS DB by Protein ID:ENSP00000357822
Original member Current member NCBI NM_001300733.2 NP_001287662.1 Accepted alive Link to Nucleotide Sequence:NM_001300733.2Link to Protein Sequence:NP_001287662.1Re-query CCDS DB by Nucleotide ID:NM_001300733Re-query CCDS DB by Protein ID:NP_001287662Link to BLAST:NP_001287662.1

Chromosomal Locations for CCDS 72916.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151760050 151760181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151760816 151760899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151762105 151762155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151762376 151762500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151762990 151763146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151763327 151763479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (702 nt):
ATGGCGGCGCCCGTTGTCACGGCCCCGGGCAGAGCTCTGCTGCGGGCGGGCGCTGGACGGCTGCTTCGGG
GAGGCGTCCAGGAGCTACTGCGGCCGCGACATGAAGGGAACGCCCCTGACCTGGCCTGCAACTTCAGCCT
TTCTCAAAATCGGGGCACGGTCATCGTGGAGCGCTGGTGGAAGGTACCGCTGGCCGGGGAGGGCCGGAAG
CCGCGCCTGCACCGGCGACATCGCGTCTATAAGCTGGTGGAGGACACGAAGCATCGGCCCAAAGAAAACC
TGGAGCTCATCCTGACGCAGTCGGTGGAGAATGTTGGAGTCCGGGGTGACCTGGTCTCAGTGAAGAAATC
TTTAGGCCGGAATCGACTCCTTCCTCAGGGACTGGCTGTATATGCATCCCCTGAAAACAAGAAGCTGTTT
GAAGAGGAGAAATTGCTGAGACAAGAAGGAAAATTAGAGAAGATCCAGACCAAGGCAGGTGAGGCGCTTG
GTGTTGTGGTTGCCCCACATACATTAAAGTTACCAGAAGAGCCTATCACACGGTGGGGCGAGTATTGGTG
TGAGGTGACGGTAAATGGGCTTGATACTGTGAGAGTGCCTATGTCTGTCGTGAACTTTGAGAAGCCCAAG
ACCAAAAGATATAAGTACTGGTTAGCCCAGCAAGCTGCCAAGGCTATGGCCCCCACCAGCCCCCAGATCT
AA

Translation (233 aa):
MAAPVVTAPGRALLRAGAGRLLRGGVQELLRPRHEGNAPDLACNFSLSQNRGTVIVERWWKVPLAGEGRK
PRLHRRHRVYKLVEDTKHRPKENLELILTQSVENVGVRGDLVSVKKSLGRNRLLPQGLAVYASPENKKLF
EEEKLLRQEGKLEKIQTKAGEALGVVVAPHTLKLPEEPITRWGEYWCEVTVNGLDTVRVPMSVVNFEKPK
TKRYKYWLAQQAAKAMAPTSPQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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