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Report for CCDS73057.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73057.1 Public Homo sapiens 1 ZNF124 24 110 108 CCDS HistoryNCBI Gene:7678Re-query CCDS DB by CCDS ID:73057.1Re-query CCDS DB by GeneID:7678See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73057.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000543802.3 ENSP00000440365.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000543802.3Link to Ensembl Protein Viewer:ENSP00000440365.2Re-query CCDS DB by Nucleotide ID:ENST00000543802Re-query CCDS DB by Protein ID:ENSP00000440365
Original member Current member NCBI NM_001297568.2 NP_001284497.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001297568.2Link to Protein Sequence:NP_001284497.1Re-query CCDS DB by Nucleotide ID:NM_001297568Re-query CCDS DB by Protein ID:NP_001284497Link to BLAST:NP_001284497.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284497.1 351 Q15973-3 351 100% 0 0

Chromosomal Locations for CCDS 73057.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247156566 247157403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247159006 247159066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247159687 247159813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247171848 247171877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1056 nt):
ATGTCGGGACACCCCGGAAGCTGGGAAATGAACTCGGTTGCCTTTGAGGATGTGGCTGTGAACTTCACCC
AGGAGGAGTGGGCTTTGTTGGATCCTTCCCAGAAGAATCTCTATAGAGACGTGATGCAGGAAACCTTCAG
GAATCTGGCTTCCATAGGAAACAAAGGGGAAGACCAGAGCATTGAAGATCAGTACAAAAATTCTTCAAGA
AATCTAAGGCACATCATATCTCATTCTGGAAACAACCCATATGGGTGTGAGGAATGCGGAAAGAAGCCAT
GTACATGTAAACAATGTCAGAAAACTTCCCTTTCTGTCACAAGGGTTCACAGAGACACAGTAATGCACAC
TGGAAATGGACATTATGGTTGTACAATATGTGAGAAAGTTTTTAATATTCCCAGTTCATTTCAGATACAT
CAGAGAAATCACACTGGAGAGAAACCCTATGAATGTATGGAATGTGGGAAAGCCTTAGGTTTTTCCCGTT
CTCTTAATAGACATAAAAGGATTCACACTGGAGAAAAACGCTATGAATGTAAGCAATGTGGGAAAGCCTT
CAGTCGTTCCAGTCACCTTCGTGACCATGAAAGAACTCATACTGGAGAGAAACCCTATGAATGTAAGCAC
TGTGGGAAAGCCTTCCGTTACTCCAATTGCCTTCATTACCATGAAAGAACTCACACTGGAGAGAAACCTT
ATGTGTGCATGGAATGTGGCAAAGCTTTCAGTTGTCTCAGTTCCTTGCAAGGACATATAAAGGCTCATGC
TGGTGAAGAACCCTATCCATGTAAGCAATGTGGGAAAGCCTTCAGATACGCCAGTTCCCTTCAGAAACAC
GAGAAAACTCATATTGCACAGAAACCCTATGTATGTAACAATTGTGGTAAAGGCTTCAGATGTTCCAGTT
CCCTTCGTGACCATGAAAGGACTCATACTGGAGAGAAACCCTATGAATGTCAGAAATGTGGCAAAGCCTT
TAGTCGTGCTAGTACCCTTTGGAAGCATAAAAAAACTCATACTGGAGAAAAGCCCTATAAATGTAAAAAA
ATGTAA

Translation (351 aa):
MSGHPGSWEMNSVAFEDVAVNFTQEEWALLDPSQKNLYRDVMQETFRNLASIGNKGEDQSIEDQYKNSSR
NLRHIISHSGNNPYGCEECGKKPCTCKQCQKTSLSVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIH
QRNHTGEKPYECMECGKALGFSRSLNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKH
CGKAFRYSNCLHYHERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKH
EKTHIAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTGEKPYKCKK
M


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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