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Report for CCDS73606.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73606.1 Public Homo sapiens 13 GRTP1 24 110 108 CCDS HistoryNCBI Gene:79774Re-query CCDS DB by CCDS ID:73606.1Re-query CCDS DB by GeneID:79774See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73606.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000620217.4 ENSP00000483734.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620217.4Link to Ensembl Protein Viewer:ENSP00000483734.1Re-query CCDS DB by Nucleotide ID:ENST00000620217Re-query CCDS DB by Protein ID:ENSP00000483734
Original member Current member NCBI NM_001286733.1 NP_001273662.1 Accepted alive Link to Nucleotide Sequence:NM_001286733.1Link to Protein Sequence:NP_001273662.1Re-query CCDS DB by Nucleotide ID:NM_001286733Re-query CCDS DB by Protein ID:NP_001273662Link to BLAST:NP_001273662.1

Chromosomal Locations for CCDS 73606.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 113324429 113324577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113344863 113344959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113350849 113350973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113355323 113355481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113363762 113363910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113364020 113364051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (711 nt):
ATGCAGCCCGCCGAGCGCTCGCGGGTCCCCAGGATCGACCCGTACGGATTCGAGCGGCCTGAGGACTTCG
ACGACGCCGCCTACGAGAAGTTTTTCTCCAGCTACCTGGTCACGCTCACCCGCAGGGCGATCAAATGGTC
CCGGCTGCTGCAGGGCGGGGGCGTCCCCAGGAGCCGGACAGTGAAGCGCTATGTCCGGAAAGGGGTCCCG
CTGGAGCACCGTGCCCGCGTCTGGATGGTGCTGAGTGGGGCCCAGGCGCAGATGGACCAGAATCCCGGCT
ACTACCACCAGCTTCTCCAGGGAGAGAGAAACCCCAGGCTGGAGGACGCCATCAGGACAGACCTGAACCG
GACCTTCCCCGACAACGTGAAGTTCCGGAAGACCACGGACCCCTGCTTACAGAGGACCCTGTACAATGTG
CTGCTGGCATATGGGCACCATAACCAGGGAGTGGGCTACTGCCAGGGAATGAATTTTATAGCAGGATATC
TGATTCTTATAACAAATAATGAAGAAGAATCTTTTTGGCTGTTAGATGCTCTTGTTGGAAGAATACTACC
AGAAAATATTTTCAGAACCTGGAAGCTTATCCATGGCCACCGTCGCCAAGCTCCGCGAGAGCTGCAGGGC
CCGGCTGCTGGCACAGGGGTGAGCGTGCCTGTCCCCTGCGTTGCTCGTCTCTACACTGACGATGCCCCTT
TCCAGAGTTGA

Translation (236 aa):
MQPAERSRVPRIDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRTVKRYVRKGVP
LEHRARVWMVLSGAQAQMDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYNV
LLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPENIFRTWKLIHGHRRQAPRELQG
PAAGTGVSVPVPCVARLYTDDAPFQS


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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