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Report for CCDS75284.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75284.1 Public Homo sapiens 5 NUDT12 24 110 108 CCDS HistoryNCBI Gene:83594Re-query CCDS DB by CCDS ID:75284.1Re-query CCDS DB by GeneID:83594See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75284.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000507423.1 ENSP00000424521.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000507423.1Link to Ensembl Protein Viewer:ENSP00000424521.1Re-query CCDS DB by Nucleotide ID:ENST00000507423Re-query CCDS DB by Protein ID:ENSP00000424521
Original member Current member NCBI NM_001300741.2 NP_001287670.1 Accepted alive Link to Nucleotide Sequence:NM_001300741.2Link to Protein Sequence:NP_001287670.1Re-query CCDS DB by Nucleotide ID:NM_001300741Re-query CCDS DB by Protein ID:NP_001287670Link to BLAST:NP_001287670.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287670.1 444 Q9BQG2-2 444 100% 0 0

Chromosomal Locations for CCDS 75284.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 103550861 103550971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 103552217 103552416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 103554740 103554853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 103555931 103556098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 103558879 103559468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 103560097 103560248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1335 nt):
ATGTCTTCTGTAAAAAGAAGTCTGAAGCAAGAAATAGTTACTCAGTTTCACTGTTCAGCTGCTGAAGGAG
ATATTGCCAAGTTAACAGGAATACTCAGTCATTCTCCATCTCTTCTCAATGAAACTTCTGAAAATGGCTG
GACTGCTTTAATGTGTGACAGATCAATTGTCAATAAATCAAGGCAGACTGCACTGGACATTGCTGTATTT
TGGGGTTATAAGCATATAGCTAATTTACTAGCTACTGCTAAAGGTGGGAAGAAGCCTTGGTTCCTAACGA
ATGAAGTGGAAGAATGTGAAAATTATTTTAGCAAAACACTACTGGACCGGAAAAGTGAAAAGAGAAATAA
TTCTGACTGGCTGCTAGCTAAAGAAAGCCATCCAGCCACAGTTTTTATTCTTTTCTCAGATTTAAATCCC
TTGGTTACTCTAGGTGGCAATAAAGAAAGTTTCCAACAGCCAGAAGTTAGGCTTTGTCAGCTGAACTACA
CAGATATAAAGGATTATTTGGCCCAGCCTGAGAAGATCACCTTGATTTTTCTTGGAGTAGAACTTGAAAT
AAAAGACAAACTACTTAATTATGCTGGTGAAGTCCCGAGAGAGGAGGAAGATGGATTGGTTGCCTGGTTT
GCTCTAGGTATAGATCCTATTGCTGCTGAAGAATTCAAGCAAAGACATGAAAATTGTTACTTTCTTCATC
CTCCTATGCCAGCCCTTCTGCAATTGAAAGAAAAAGAAGCTGGGGTTGTAGCTCAAGCAAGATCTGTTCT
TGCCTGGCACAGTCGATACAAGTTTTGCCCAACCTGTGGAAATGCAACTAAAATTGAAGAAGGTGGCTAT
AAGAGATTATGTTTAAAAGAAGACTGTCCTAGTCTCAATGGCGTCCATAATACCTCATACCCAAGAGTTG
ATCCAGTAGTAATCATGCAAGTTATTCATCCAGATGGGACCAAATGCCTTTTAGGCAGGCAGAAAAGATT
TCCCCCAGGCATGTTTACTTGCCTTGCTGGATTTATTGAGCCTGGAGAGACAATAGAAGATGCTGTTAGG
AGAGAAGTAGAAGAGGAAAGTGGAGTCAAAGTTGGCCATGTTCAGTATGTTGCTTGTCAACCATGGCCAA
TGCCTTCCTCCTTAATGATTGGTTGCTTAGCTCTAGCAGTGTCTACAGAAATTAAAGTTGACAAGAATGA
AATAGAGGATGCCCGCTGGTTCACTAGAGAACAGGTCCTGGATGTTCTGACCAAAGGGAAGCAGCAGGCA
TTCTTTGTGCCACCAAGCCGAGCTATTGCACATCAATTAATCAAACACTGGATTAGAATAAATCCTAATC
TCTAA

Translation (444 aa):
MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMCDRSIVNKSRQTALDIAVF
WGYKHIANLLATAKGGKKPWFLTNEVEECENYFSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNP
LVTLGGNKESFQQPEVRLCQLNYTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWF
ALGIDPIAAEEFKQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGY
KRLCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPGETIEDAVR
REVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDARWFTREQVLDVLTKGKQQA
FFVPPSRAIAHQLIKHWIRINPNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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