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Report for CCDS75300.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75300.1 Public Homo sapiens 5 ZCCHC10 24 110 108 CCDS HistoryNCBI Gene:54819Re-query CCDS DB by CCDS ID:75300.1Re-query CCDS DB by GeneID:54819See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75300.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000513848.5 ENSP00000427430.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000513848.5Link to Ensembl Protein Viewer:ENSP00000427430.1Re-query CCDS DB by Nucleotide ID:ENST00000513848Re-query CCDS DB by Protein ID:ENSP00000427430
Original member Current member NCBI NM_001300819.3 NP_001287748.1 Accepted alive Link to Nucleotide Sequence:NM_001300819.3Link to Protein Sequence:NP_001287748.1Re-query CCDS DB by Nucleotide ID:NM_001300819Re-query CCDS DB by Protein ID:NP_001287748Link to BLAST:NP_001287748.1

Chromosomal Locations for CCDS 75300.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 132998583 132998850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 133006759 133006920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 133026497 133026537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (471 nt):
ATGGCGACTCCCATGCATCGGCTAATAGCCCGGAGACAAGCTGAAGCAAATAAGCAACATGTAAGATGTC
AGAAATGCTTGGAATTTGGACATTGGACTTATGAATGCACAGGAAAAAGAAAATACCTACATAGGCCCTC
AAGGACAGCAGAACTAAAGAAAGCTTTAAAAGAAAAAGAAAACAGATTATTATTGCAACAAAGGTCTAAG
AGTGTAACCAGTTCCAGTAGCAGTAGCAGTGACAGTTCTGCCAGTGATTCTTCATCAGAGAGTGAAGAAA
CATCTACCTCTTCCTCCTCAGAGGACAGTGACACTGATGAAAGCTCCTCTAGTTCCTCATCCTCAGCCTC
CTCCACAACCTCTTCCTCCTCCTCTGATTCAGACTCAGATTCCAGCTCTTCCAGTAGCAGTAGCACCAGC
ACAGATAGCAGCTCTGACGATGAACCACCAAAGAAGAAGAAAAAGAAATAG

Translation (156 aa):
MATPMHRLIARRQAEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELKKALKEKENRLLLQQRSK
SVTSSSSSSSDSSASDSSSESEETSTSSSSEDSDTDESSSSSSSSASSTTSSSSSDSDSDSSSSSSSSTS
TDSSSDDEPPKKKKKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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