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Report for CCDS76542.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76542.1 Public Homo sapiens 12 DENND5B 24 110 108 CCDS HistoryNCBI Gene:160518Re-query CCDS DB by CCDS ID:76542.1Re-query CCDS DB by GeneID:160518See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76542.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000536562.5 ENSP00000444889.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536562.5Link to Ensembl Protein Viewer:ENSP00000444889.1Re-query CCDS DB by Nucleotide ID:ENST00000536562Re-query CCDS DB by Protein ID:ENSP00000444889
Original member Current member NCBI NM_001308339.2 NP_001295268.1 Accepted alive Link to Nucleotide Sequence:NM_001308339.2Link to Protein Sequence:NP_001295268.1Re-query CCDS DB by Nucleotide ID:NM_001308339Re-query CCDS DB by Protein ID:NP_001295268Link to BLAST:NP_001295268.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295268.1 1309 Q6ZUT9-2 1309 99.8472% 0 2

Chromosomal Locations for CCDS 76542.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 31387603 31387786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31389324 31389498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31392267 31392393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31392614 31392696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31398175 31398362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31399654 31399772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31402498 31402643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31409263 31409384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31413436 31413564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31415367 31415448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31423597 31423675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31424535 31424687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31426293 31426424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31433155 31433248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31442775 31442925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31447538 31447769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31451940 31452476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31460194 31460381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31479589 31480255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31495810 31495919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31499606 31499671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31500393 31500558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3930 nt):
ATGGGCACCCACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGTTGATC
AGGCTGGTCTCGAACTCCTGACCTCAAGCAATTCACCTGCCTCGGCCTCCCGAAGTGCTGAGATTACAGT
TGTGAGCCAACATGCCCAGCCAGGATTTTTGTACCAATGGCTAGAAGCAGATCGTCATGGCAAGAGCCAA
GGTGCTGCAAATACGACTTCAGGCGAAAATTTTGACCAGAGTCCTTTGAGAAGAACATTCAAATCCAAAG
TTCTCGCCCACTATCCTCAGAATATAGAATGGAACCCTTTTGATCAAGATGCGGTGAACATGTTGTGCAT
GCCTAAAGGGCTATCTTTCAGGACACAAACGGACAATAAAGACCCCCAGTTTCACTCATTTATAATTACC
AGGGAAGATGGTTCTCGCACCTATGGTTTTGTTCTCACTTTTTATGAAGAAGTTACAAGTAAGCAAATCT
GCACAGCAATGCAGACACTTTACCAGATGCACAACGCTGAGCATTACAGCAGTGTGTATGCTTCATCTTC
CTGCAGTATGGACTCATTGGCAAGTAGTCTTGATGAAGGAGATACAACTTCCCTTTTGAAACTCCAGCGA
TACAACTCCTATGATATTAGCAGAGACACCCTGTATGTTTCAAAAAGTATATGCTTGATCACACCGTTAC
CATTCATGCAGGCCTGCAAGAAATTCCTTATCCAGCTTTACAAGGCTGTTACCTCACAGCAGCCACCACC
CTTGCCACTTGAAAGCTATATCCACAATATTCTTTATGAAGTACCCCTTCCACCTCCAGGGAGGTCACTG
AAATTTTATGGTGTTTATGAACCTGTCATCTGCCAGAGGCCTGGGCCCAGTGAACTCCCCCTCTCTGATT
ACCCCCTTCGGGAGGCATTTGAGCTCCTGGGATTAGAGAACCTGGTGCAGGTGTTTACCTGTGTTCTTTT
AGAGATGCAAATCCTTCTCTACTCACAAGATTATCAACGCCTGATGACTGTGGCAGAAGGCATCACCACA
CTTTTGTTCCCATTTCAATGGCAACATGTTTATGTGCCCATTCTACCTGCTTCTCTGCTACATTTTCTTG
ATGCTCCTGTCCCTTATCTGATGGGCCTTCAGTCAAAAGAAGGAACTGACCGTTCTAAACTAGAACTTCC
TCAAGAGGCTAATTTGTGTTTTGTGGACATTGACAACCATTTTATTGAGTTGCCTGAAGAATTTCCACAG
TTCCCCAATAAAGTGGATTTTATCCAAGAACTCTCTGAGGTTCTTGTTCAATTTGGGATCCCTCCTGAGG
GCAGCCTACATTGCAGTGAGAGTACCAGCAAACTGAAGAATATGGTTCTGAAAGACTTGGTCAATGACAA
AAAGAACGGCAATGTCTGTACTAATAACATCAGCATGTATGAGTTACTGAAGGGCAATGAAACCATAGCC
CGCTTGCAGGCTCTGGCCAAGCGTACTGGTGTGGCTGTGGAAAAAATGGACCTCTCTGCTTCTCTGGGTG
AAAAAGACAAGGATTTAAAACTGCATTGTGAAGAGGCAGAACTAAGGGACTACCAGCTCAATGTACAGCT
CCGAGAGGTCTTTGCTAACCGTTTTACACAGATGTTTGCAGATTACGAAGCATTTGTCATTCAGACTGCC
CAGGACATGGAATCCTGGCTGACCAACCGGGAACAGATGCAGAACTTTGACAAAGCTTCCTTTCTGTCTG
ACCAGCCTGAGCCTTACCTGCCATTTCTTTCACGCTTCATTGAAACACAGATGTTTGCCACCTTTATTGA
TAATAAAATTATGTCTCAGTGGGAAGAGAAAGATCCTTTGCTTCGGGTCTTTGACACTCGGATTGATAAG
ATAAGGCTGTATAATGTAAGGGCACCCACCTTGCGGACATCTATATATCAGAAATGCAGCACTTTAAAAG
AAGCAGCCCAATCAATTGAGCAGAGACTGATGAAAATGGATCACACTGCAATCCACCCACATCTACTTGA
TATGAAAATTGGTCAAGGCAAATATGAGCAGGGGTTCTTTCCAAAGTTACAGTCCGATGTCTTGGCAACA
GGACCAACCAGTAACAATCGCTGGGTAAGTCGGAGTGCCACTGCACAGCGCAGGAAAGAACGCCTTCGCC
AGCATTCTGAGCATGTTGGGCTGGACAACGACTTGAGGGAGAAATATATGCAAGAGGCACGAAGTTTAGG
AAAAAACCTGAGGCAACCCAAACTGTCAGACCTCTCTCCTGCAGTTATTGCACAGACCAACTGTAAATTC
GTAGAAGGCTTATTAAAAGAATGTAGAATGAAGACAAAGCGCATGTTGGTGGAGAAGATGGGACATGAAG
CGGTGGAACTTGGCCATGGAGAAGCAAACATCACCGGCCTGGAGGAGAACACCTTGATCGCCAGCCTTTG
TGACCTGCTGGAGAGGATATGGAGCCATGGCTTGCAGGTCAAGCAGGGGAAGTCGGCTTTGTGGTCACAT
TTAATTCAATTTCAGGACAGAGAAGAGAAACAAGAGCACCTTGCAGAATCACCAGTTGCCCTCGGACCAG
AAAGAAGAAAATCTGACTCAGGAGTTATGTTGCCAACGCTCAGGGTCTCTCTTATTCAGGACATGAGGCA
TATTCAAAACATGAGTGAGATCAAGACTGATGTTGGACGAGCTCGGGCGTGGATAAGACTGTCTCTAGAA
AAGAAGCTCTTGTCCCAGCATCTTAAGCAGTTGCTTTCTAACCAACCACTCACCAAGAAGCTTTATAAGC
GATATGCTTTTCTACGTTGCGAAGAAGAAAGAGAGCAGTTTCTTTACCACCTTCTTTCTCTCAATGCTGT
GGACTATTTCTGCTTCACCAGTGTGTTCACCACTATCATGATTCCGTATAGGTCAGTGATCATCCCAATC
AAAAAGCTGAGCAATGCAATAATCACATCAAACCCTTGGATCTGTGTATCAGGAGAGCTGGGAGACACAG
GAGTAATGCAGATTCCCAAAAACCTCCTCGAAATGACCTTTGAGTGCCAGAACTTGGGGAAGCTGACCAC
TGTTCAGATTGGTCACGATAACTCAGGACTGTTAGCCAAATGGCTAGTGGATTGTGTCATGGTCAGAAAT
GAAATCACAGGACATACATACAGATTCCCATGTGGGCGGTGGCTGGGGAAAGGCATTGATGATGGGAGCC
TGGAGAGAATTCTTATTGGAGAGTTGATGACATCAGCATCAGATGAAGATCTAGTAAAGCAGTGTCGGAC
TCCACCCCAGCAGAAGTCACCCACCACGGCTAGGAGATTGAGCATCACTTCACTGACAGGAAAAAACAAC
AAACCCAATGCTGGGCAGATACAAGAAGGAATTGGAGAAGCTGTGAACAATATTGTGAAACATTTTCATA
AACCTGAAAAAGAGAGAGGAAGCCTCACCGTGTTGCTGTGTGGAGAAAATGGCCTGGTTGCAGCCCTTGA
GCAAGTTTTCCACCATGGGTTCAAATCTGCCCGCATCTTTCACAAGAATGTCTTCATCTGGGACTTCATA
GAGAAAGTGGTTGCTTATTTTGAAACAACTGACCAGATTCTAGATAATGAAGATGATGTCCTTATTCAGA
AATCATCCTGCAAAACCTTCTGCCACTACGTAAATGCTATTAATACTGCACCCAGGAACATTGGGAAGGA
TGGCAAATTCCAGATTTTAGTTTGCCTTGGAACAAGGGATCGCCTGCTCCCACAGTGGATTCCATTGTTA
GCTGAGTGTCCTGCCATCACTCGAATGTATGAAGAGAGCGCTCTCCTGCGAGACCGCATGACTGTCAACT
CCCTTATCCGAATTCTGCAGACCATTCAGGACTTCACCATAGTCCTAGAAGGATCACTCATCAAAGGAGT
GGATGTGTAA

Translation (1309 aa):
MGTHHHAQLIFVFLVEMRFHHVDQAGLELLTSSNSPASASRSAEITVVSQHAQPGFLYQWLEADRHGKSQ
GAANTTSGENFDQSPLRRTFKSKVLAHYPQNIEWNPFDQDAVNMLCMPKGLSFRTQTDNKDPQFHSFIIT
REDGSRTYGFVLTFYEEVTSKQICTAMQTLYQMHNAEHYSSVYASSSCSMDSLASSLDEGDTTSLLKLQR
YNSYDISRDTLYVSKSICLITPLPFMQACKKFLIQLYKAVTSQQPPPLPLESYIHNILYEVPLPPPGRSL
KFYGVYEPVICQRPGPSELPLSDYPLREAFELLGLENLVQVFTCVLLEMQILLYSQDYQRLMTVAEGITT
LLFPFQWQHVYVPILPASLLHFLDAPVPYLMGLQSKEGTDRSKLELPQEANLCFVDIDNHFIELPEEFPQ
FPNKVDFIQELSEVLVQFGIPPEGSLHCSESTSKLKNMVLKDLVNDKKNGNVCTNNISMYELLKGNETIA
RLQALAKRTGVAVEKMDLSASLGEKDKDLKLHCEEAELRDYQLNVQLREVFANRFTQMFADYEAFVIQTA
QDMESWLTNREQMQNFDKASFLSDQPEPYLPFLSRFIETQMFATFIDNKIMSQWEEKDPLLRVFDTRIDK
IRLYNVRAPTLRTSIYQKCSTLKEAAQSIEQRLMKMDHTAIHPHLLDMKIGQGKYEQGFFPKLQSDVLAT
GPTSNNRWVSRSATAQRRKERLRQHSEHVGLDNDLREKYMQEARSLGKNLRQPKLSDLSPAVIAQTNCKF
VEGLLKECRMKTKRMLVEKMGHEAVELGHGEANITGLEENTLIASLCDLLERIWSHGLQVKQGKSALWSH
LIQFQDREEKQEHLAESPVALGPERRKSDSGVMLPTLRVSLIQDMRHIQNMSEIKTDVGRARAWIRLSLE
KKLLSQHLKQLLSNQPLTKKLYKRYAFLRCEEEREQFLYHLLSLNAVDYFCFTSVFTTIMIPYRSVIIPI
KKLSNAIITSNPWICVSGELGDTGVMQIPKNLLEMTFECQNLGKLTTVQIGHDNSGLLAKWLVDCVMVRN
EITGHTYRFPCGRWLGKGIDDGSLERILIGELMTSASDEDLVKQCRTPPQQKSPTTARRLSITSLTGKNN
KPNAGQIQEGIGEAVNNIVKHFHKPEKERGSLTVLLCGENGLVAALEQVFHHGFKSARIFHKNVFIWDFI
EKVVAYFETTDQILDNEDDVLIQKSSCKTFCHYVNAINTAPRNIGKDGKFQILVCLGTRDRLLPQWIPLL
AECPAITRMYEESALLRDRMTVNSLIRILQTIQDFTIVLEGSLIKGVDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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