NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS7791.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7791.1 Public Homo sapiens 11 DENND2B 24 110 108 CCDS HistoryNCBI Gene:6764Re-query CCDS DB by CCDS ID:7791.1Re-query CCDS DB by GeneID:6764See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7791.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313726.11 ENSP00000319678.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313726.11Link to Ensembl Protein Viewer:ENSP00000319678.6Re-query CCDS DB by Nucleotide ID:ENST00000313726Re-query CCDS DB by Protein ID:ENSP00000319678
Original member Current member EBI ENST00000534127.5 ENSP00000433528.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534127.5Link to Ensembl Protein Viewer:ENSP00000433528.1Re-query CCDS DB by Nucleotide ID:ENST00000534127Re-query CCDS DB by Protein ID:ENSP00000433528
Original member Current member NCBI NM_001376495.1 NP_001363424.1 Accepted alive Link to Nucleotide Sequence:NM_001376495.1Link to Protein Sequence:NP_001363424.1Re-query CCDS DB by Nucleotide ID:NM_001376495Re-query CCDS DB by Protein ID:NP_001363424Link to BLAST:NP_001363424.1
Original member Current member NCBI NM_001376496.1 NP_001363425.1 Accepted alive Link to Nucleotide Sequence:NM_001376496.1Link to Protein Sequence:NP_001363425.1Re-query CCDS DB by Nucleotide ID:NM_001376496Re-query CCDS DB by Protein ID:NP_001363425Link to BLAST:NP_001363425.1
Original member Current member NCBI NM_001376497.1 NP_001363426.1 Accepted alive Link to Nucleotide Sequence:NM_001376497.1Link to Protein Sequence:NP_001363426.1Re-query CCDS DB by Nucleotide ID:NM_001376497Re-query CCDS DB by Protein ID:NP_001363426Link to BLAST:NP_001363426.1
Original member Current member NCBI NM_005418.4 NP_005409.3 Accepted alive Link to Nucleotide Sequence:NM_005418.4Link to Protein Sequence:NP_005409.3Re-query CCDS DB by Nucleotide ID:NM_005418Re-query CCDS DB by Protein ID:NP_005409Link to BLAST:NP_005409.3
Original member Current member NCBI NM_213618.2 NP_998783.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_213618.2Link to Protein Sequence:NP_998783.1Re-query CCDS DB by Nucleotide ID:NM_213618Re-query CCDS DB by Protein ID:NP_998783Link to BLAST:NP_998783.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001363424.1 1137 P78524-1 1137 100% 0 0
NP_001363425.1 1137 P78524-1 1137 100% 0 0
NP_001363426.1 1137 P78524-1 1137 100% 0 0
NP_005409.3 1137 P78524-1 1137 100% 0 0
NP_998783.1 1137 P78524-1 1137 100% 0 0

Chromosomal Locations for CCDS 7791.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 8694096 8694130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8695463 8695549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8696427 8696666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8697525 8697636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8698933 8698974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8699213 8699390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8702572 8702720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8707085 8707225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8707777 8707854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8710845 8710914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8711122 8711231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8712551 8712735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8713998 8714042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8714610 8714706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8715603 8715818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8717741 8717892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8726073 8726209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8729950 8731209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8750621 8750700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3414 nt):
ATGACCATGACTGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGA
CTCTGAGCAGGTCTCAGTCAGTCTCTCCACCTCCAGTTCTCTCCCCACCAAGGAGTCCCATCTACCCGCT
CAGTGATAGTGAAACCTCAGCCTGCAGGTACCCCAGCCACTCCAGCTCCCGGGTGCTCCTCAAGGACCGG
CACCCCCCAGCTCCTTCACCCCAGAATCCTCAAGATCCCTCCCCAGATACTTCCCCACCCACCTGTCCCT
TCAAGACCGCCAGCTTCGGTTATTTGGACAGAAGCCCTTCGGCGTGCAAGAGAGACGCCCAAAAGGAAAG
TGTCCAAGGCGCAGCCCAGGATGTAGCAGGGGTCGCTGCCTGCCTCCCCCTTGCCCAGAGCACGCCATTC
CCGGGGCCAGCAGCTGGCCCCCGGGGCGTCTTGCTGACCCGTACCGGTACCCGCGCCCACAGCCTGGGCA
TCCGGGAGAAGATATCAGCATGGGAAGGTCGCCGAGAGGCGTCGCCCAGGATGAGCATGTGTGGAGAGAA
GCGGGAGGGCTCTGGGAGCGAGTGGGCGGCCAGTGAGGGCTGCCCCAGCCTGGGCTGTCCCAGCGTGGTG
CCGTCCCCCTGCAGCTCTGAAAAGACCTTTGATTTCAAGGGCCTCCGGAGGATGAGCAGGACCTTCTCCG
AGTGTTCCTACCCAGAGACTGAGGAGGAGGGAGAGGCGCTCCCTGTCCGGGACTCTTTCTACCGGCTGGA
GAAACGGCTGGGCCGGAGTGAGCCCAGCGCCTTCCTCAGGGGGCATGGCAGCAGGAAGGAGAGCTCAGCA
GTGCTGAGCCGGATCCAGAAAATTGAACAGGTCCTGAAGGAGCAGCCGGGCCGGGGGCTCCCCCAGCTCC
CCAGCAGCTGCTACAGCGTGGACCGGGGGAAAAGGAAGACTGGAACCTTGGGCTCCTTGGAGGAGCCGGC
AGGGGGCGCGAGTGTGAGCGCTGGCAGCCGGGCAGTCGGAGTGGCTGGTGTTGCGGGGGAGGCGGGCCCA
CCCCCAGAGAGGGAAGGCAGTGGTTCCACTAAGCCCGGGACCCCTGGAAATAGCCCTAGCTCCCAGCGGC
TGCCATCGAAGAGTTCCCTCGATCCCGCTGTGAACCCTGTCCCCAAACCCAAGCGCACCTTTGAATACGA
GGCTGACAAGAACCCCAAGAGTAAGCCCAGTAATGGTCTACCTCCTTCACCCACACCTGCTGCTCCACCT
CCCTTGCCCTCCACCCCAGCCCCGCCAGTCACCCGGAGACCCAAGAAGGACATGCGTGGTCACCGCAAGT
CCCAGAGCAGAAAATCCTTTGAGTTTGAGGATGCATCCAGTCTCCAGTCCCTGTACCCCTCTTCTCCCAC
TGAGAATGGTACTGAGAACCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAGAAAATGCCTATGAAGAT
ATTGTGGGAGATCTGCCCAAGGAGAATCCATATGAGGATGTGGACTTAAAGAGCCGAAGAGCAGGACGAA
AATCCCAGCAACTGTCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCTCAGGACAGGAAGTA
CAACAGCCCGCCCACACAGCTTTCCCTGAAACCCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAGAA
AGGAAGAGCCACCGGCTGCCACGATTACCCAAGAGGCACAGCCATGACGACATGCTGCTGCTGGCTCAGC
TGAGTCTGCCGTCCTCACCCTCCAGCCTCAATGAAGACAGCCTCAGCACCACCAGCGAGCTGCTGTCCAG
CCGCCGGGCCCGCCGCATTCCCAAGCTTGTCCAAAGAATTAACTCCATCTACAATGCCAAGAGAGGAAAG
AAGAGATTAAAAAAGTTGTCTATGTCCAGCATTGAAACAGCATCACTGAGAGATGAAAACAGTGAGAGCG
AGAGCGACTCTGATGACAGGTTCAAAGCCCACACACAGCGCCTGGTCCACATCCAGTCGATGCTGAAGCG
CGCCCCCAGCTATCGCACGCTGGAGCTGGAGCTGCTGGAGTGGCAGGAGCGGGAGCTTTTTGAGTACTTT
GTGGTGGTGTCCCTCAAGAAGAAGCCATCGCGAAACACCTACCTCCCCGAAGTCTCCTACCAGTTTCCCA
AGCTGGACCGACCCACCAAGCAGATGCGAGAGGCAGAGGAAAGGCTCAAAGCCATTCCCCAGTTTTGCTT
CCCTGATGCCAAGGACTGGCTTCCTGTGTCAGAGTATAGCAGTGAGACCTTTTCTTTCATGCTGACTGGG
GAAGATGGCAGCAGACGCTTTGGCTACTGCAGGCGCTTACTGCCAAGTGGGAAAGGGCCCCGGTTGCCAG
AGGTGTACTGTGTCATCAGCCGCCTTGGCTGCTTCGGCTTGTTTTCCAAGGTCCTAGATGAGGTGGAGCG
CCGGCGTGGGATCTCCGCTGCATTGGTCTATCCTTTCATGAGAAGTCTCATGGAGTCGCCCTTCCCAGCC
CCAGGGAAGACCATCAAAGTGAAGACATTCCTGCCAGGTGCTGGCAATGAGGTGTTAGAGCTGCGGCGGC
CCATGGACTCAAGGCTGGAGCACGTGGACTTTGAGTGCCTTTTTACCTGCCTCAGTGTGCGCCAGCTCAT
CCGAATCTTTGCCTCACTGCTGCTGGAGCGCCGGGTCATTTTTGTGGCAGATAAGCTCAGTACCCTCTCC
AGCTGCTCCCACGCGGTGGTGGCCTTGCTCTACCCCTTCTCCTGGCAGCACACCTTCATTCCTGTCCTCC
CGGCCTCCATGATTGACATCGTCTGCTGTCCCACCCCCTTCCTGGTTGGCCTGCTCTCCAGCTCCCTCCC
CAAACTGAAGGAGCTGCCTGTGGAGGAGGCGCTGATGGTGAATCTGGGATCTGACCGATTCATCCGACAG
ATGGACGACGAAGACACGTTGTTACCTAGGAAGTTACAGGCAGCTCTGGAGCAGGCTCTGGAGAGGAAGA
ATGAGCTGATCTCCCAGGACTCTGACAGCGACTCCGACGATGAATGTAATACCCTCAATGGGCTGGTGTC
GGAGGTGTTTATCCGGTTCTTTGTGGAGACCGTTGGGCACTACTCCCTCTTTCTGACACAGAGTGAGAAG
GGAGAGAGGGCCTTTCAGCGAGAGGCCTTCCGCAAATCTGTGGCCTCCAAAAGCATCCGCCGCTTTCTTG
AGGTTTTTATGGAGTCTCAGATGTTTGCTGGCTTCATCCAAGACAGGGAGCTAAGAAAGTGTCGGGCAAA
GGGCCTTTTTGAGCAGCGAGTGGAGCAGTACTTAGAAGAACTCCCAGACACTGAGCAGAGTGGAATGAAT
AAGTTTCTCCGAGGTTTGGGCAACAAAATGAAGTTTCTCCACAAGAAGAATTAA

Translation (1137 aa):
MTMTANKNSSITHGAGGTKAPRGTLSRSQSVSPPPVLSPPRSPIYPLSDSETSACRYPSHSSSRVLLKDR
HPPAPSPQNPQDPSPDTSPPTCPFKTASFGYLDRSPSACKRDAQKESVQGAAQDVAGVAACLPLAQSTPF
PGPAAGPRGVLLTRTGTRAHSLGIREKISAWEGRREASPRMSMCGEKREGSGSEWAASEGCPSLGCPSVV
PSPCSSEKTFDFKGLRRMSRTFSECSYPETEEEGEALPVRDSFYRLEKRLGRSEPSAFLRGHGSRKESSA
VLSRIQKIEQVLKEQPGRGLPQLPSSCYSVDRGKRKTGTLGSLEEPAGGASVSAGSRAVGVAGVAGEAGP
PPEREGSGSTKPGTPGNSPSSQRLPSKSSLDPAVNPVPKPKRTFEYEADKNPKSKPSNGLPPSPTPAAPP
PLPSTPAPPVTRRPKKDMRGHRKSQSRKSFEFEDASSLQSLYPSSPTENGTENQPKFGSKSTLEENAYED
IVGDLPKENPYEDVDLKSRRAGRKSQQLSENSLDSLHRMWSPQDRKYNSPPTQLSLKPNSQSLRSGNWSE
RKSHRLPRLPKRHSHDDMLLLAQLSLPSSPSSLNEDSLSTTSELLSSRRARRIPKLVQRINSIYNAKRGK
KRLKKLSMSSIETASLRDENSESESDSDDRFKAHTQRLVHIQSMLKRAPSYRTLELELLEWQERELFEYF
VVVSLKKKPSRNTYLPEVSYQFPKLDRPTKQMREAEERLKAIPQFCFPDAKDWLPVSEYSSETFSFMLTG
EDGSRRFGYCRRLLPSGKGPRLPEVYCVISRLGCFGLFSKVLDEVERRRGISAALVYPFMRSLMESPFPA
PGKTIKVKTFLPGAGNEVLELRRPMDSRLEHVDFECLFTCLSVRQLIRIFASLLLERRVIFVADKLSTLS
SCSHAVVALLYPFSWQHTFIPVLPASMIDIVCCPTPFLVGLLSSSLPKLKELPVEEALMVNLGSDRFIRQ
MDDEDTLLPRKLQAALEQALERKNELISQDSDSDSDDECNTLNGLVSEVFIRFFVETVGHYSLFLTQSEK
GERAFQREAFRKSVASKSIRRFLEVFMESQMFAGFIQDRELRKCRAKGLFEQRVEQYLEELPDTEQSGMN
KFLRGLGNKMKFLHKKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH