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Report for CCDS7792.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7792.1 Public Homo sapiens 11 DENND2B 24 110 108 CCDS HistoryNCBI Gene:6764Re-query CCDS DB by CCDS ID:7792.1Re-query CCDS DB by GeneID:6764See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7792.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000526757.5 ENSP00000435097.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000526757.5Link to Ensembl Protein Viewer:ENSP00000435097.1Re-query CCDS DB by Nucleotide ID:ENST00000526757Re-query CCDS DB by Protein ID:ENSP00000435097
Original member Current member EBI ENST00000530438.5 ENSP00000436802.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530438.5Link to Ensembl Protein Viewer:ENSP00000436802.1Re-query CCDS DB by Nucleotide ID:ENST00000530438Re-query CCDS DB by Protein ID:ENSP00000436802
Original member Current member NCBI NM_001376501.1 NP_001363430.1 Accepted alive Link to Nucleotide Sequence:NM_001376501.1Link to Protein Sequence:NP_001363430.1Re-query CCDS DB by Nucleotide ID:NM_001376501Re-query CCDS DB by Protein ID:NP_001363430Link to BLAST:NP_001363430.1
Original member Current member NCBI NM_001376502.1 NP_001363431.1 Accepted alive Link to Nucleotide Sequence:NM_001376502.1Link to Protein Sequence:NP_001363431.1Re-query CCDS DB by Nucleotide ID:NM_001376502Re-query CCDS DB by Protein ID:NP_001363431Link to BLAST:NP_001363431.1
Original member Current member NCBI NM_139157.3 NP_631896.1 Accepted alive Link to Nucleotide Sequence:NM_139157.3Link to Protein Sequence:NP_631896.1Re-query CCDS DB by Nucleotide ID:NM_139157Re-query CCDS DB by Protein ID:NP_631896Link to BLAST:NP_631896.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001363430.1 717 P78524-2 717 100% 0 0
NP_001363431.1 717 P78524-2 717 100% 0 0
NP_631896.1 717 P78524-2 717 100% 0 0

Chromosomal Locations for CCDS 7792.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 8694096 8694130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8695463 8695549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8696427 8696666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8697525 8697636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8698933 8698974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8699213 8699390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8702572 8702720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8707085 8707225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8707777 8707854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8710845 8710914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8711122 8711231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8712551 8712735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8713998 8714042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8714610 8714706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8715603 8715818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8717741 8717892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8726073 8726209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8750621 8750700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2154 nt):
ATGACCATGACTGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGA
CTCTGAGCAGAAAATCCTTTGAGTTTGAGGATGCATCCAGTCTCCAGTCCCTGTACCCCTCTTCTCCCAC
TGAGAATGGTACTGAGAACCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAGAAAATGCCTATGAAGAT
ATTGTGGGAGATCTGCCCAAGGAGAATCCATATGAGGATGTGGACTTAAAGAGCCGAAGAGCAGGACGAA
AATCCCAGCAACTGTCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCTCAGGACAGGAAGTA
CAACAGCCCGCCCACACAGCTTTCCCTGAAACCCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAGAA
AGGAAGAGCCACCGGCTGCCACGATTACCCAAGAGGCACAGCCATGACGACATGCTGCTGCTGGCTCAGC
TGAGTCTGCCGTCCTCACCCTCCAGCCTCAATGAAGACAGCCTCAGCACCACCAGCGAGCTGCTGTCCAG
CCGCCGGGCCCGCCGCATTCCCAAGCTTGTCCAAAGAATTAACTCCATCTACAATGCCAAGAGAGGAAAG
AAGAGATTAAAAAAGTTGTCTATGTCCAGCATTGAAACAGCATCACTGAGAGATGAAAACAGTGAGAGCG
AGAGCGACTCTGATGACAGGTTCAAAGCCCACACACAGCGCCTGGTCCACATCCAGTCGATGCTGAAGCG
CGCCCCCAGCTATCGCACGCTGGAGCTGGAGCTGCTGGAGTGGCAGGAGCGGGAGCTTTTTGAGTACTTT
GTGGTGGTGTCCCTCAAGAAGAAGCCATCGCGAAACACCTACCTCCCCGAAGTCTCCTACCAGTTTCCCA
AGCTGGACCGACCCACCAAGCAGATGCGAGAGGCAGAGGAAAGGCTCAAAGCCATTCCCCAGTTTTGCTT
CCCTGATGCCAAGGACTGGCTTCCTGTGTCAGAGTATAGCAGTGAGACCTTTTCTTTCATGCTGACTGGG
GAAGATGGCAGCAGACGCTTTGGCTACTGCAGGCGCTTACTGCCAAGTGGGAAAGGGCCCCGGTTGCCAG
AGGTGTACTGTGTCATCAGCCGCCTTGGCTGCTTCGGCTTGTTTTCCAAGGTCCTAGATGAGGTGGAGCG
CCGGCGTGGGATCTCCGCTGCATTGGTCTATCCTTTCATGAGAAGTCTCATGGAGTCGCCCTTCCCAGCC
CCAGGGAAGACCATCAAAGTGAAGACATTCCTGCCAGGTGCTGGCAATGAGGTGTTAGAGCTGCGGCGGC
CCATGGACTCAAGGCTGGAGCACGTGGACTTTGAGTGCCTTTTTACCTGCCTCAGTGTGCGCCAGCTCAT
CCGAATCTTTGCCTCACTGCTGCTGGAGCGCCGGGTCATTTTTGTGGCAGATAAGCTCAGTACCCTCTCC
AGCTGCTCCCACGCGGTGGTGGCCTTGCTCTACCCCTTCTCCTGGCAGCACACCTTCATTCCTGTCCTCC
CGGCCTCCATGATTGACATCGTCTGCTGTCCCACCCCCTTCCTGGTTGGCCTGCTCTCCAGCTCCCTCCC
CAAACTGAAGGAGCTGCCTGTGGAGGAGGCGCTGATGGTGAATCTGGGATCTGACCGATTCATCCGACAG
ATGGACGACGAAGACACGTTGTTACCTAGGAAGTTACAGGCAGCTCTGGAGCAGGCTCTGGAGAGGAAGA
ATGAGCTGATCTCCCAGGACTCTGACAGCGACTCCGACGATGAATGTAATACCCTCAATGGGCTGGTGTC
GGAGGTGTTTATCCGGTTCTTTGTGGAGACCGTTGGGCACTACTCCCTCTTTCTGACACAGAGTGAGAAG
GGAGAGAGGGCCTTTCAGCGAGAGGCCTTCCGCAAATCTGTGGCCTCCAAAAGCATCCGCCGCTTTCTTG
AGGTTTTTATGGAGTCTCAGATGTTTGCTGGCTTCATCCAAGACAGGGAGCTAAGAAAGTGTCGGGCAAA
GGGCCTTTTTGAGCAGCGAGTGGAGCAGTACTTAGAAGAACTCCCAGACACTGAGCAGAGTGGAATGAAT
AAGTTTCTCCGAGGTTTGGGCAACAAAATGAAGTTTCTCCACAAGAAGAATTAA

Translation (717 aa):
MTMTANKNSSITHGAGGTKAPRGTLSRKSFEFEDASSLQSLYPSSPTENGTENQPKFGSKSTLEENAYED
IVGDLPKENPYEDVDLKSRRAGRKSQQLSENSLDSLHRMWSPQDRKYNSPPTQLSLKPNSQSLRSGNWSE
RKSHRLPRLPKRHSHDDMLLLAQLSLPSSPSSLNEDSLSTTSELLSSRRARRIPKLVQRINSIYNAKRGK
KRLKKLSMSSIETASLRDENSESESDSDDRFKAHTQRLVHIQSMLKRAPSYRTLELELLEWQERELFEYF
VVVSLKKKPSRNTYLPEVSYQFPKLDRPTKQMREAEERLKAIPQFCFPDAKDWLPVSEYSSETFSFMLTG
EDGSRRFGYCRRLLPSGKGPRLPEVYCVISRLGCFGLFSKVLDEVERRRGISAALVYPFMRSLMESPFPA
PGKTIKVKTFLPGAGNEVLELRRPMDSRLEHVDFECLFTCLSVRQLIRIFASLLLERRVIFVADKLSTLS
SCSHAVVALLYPFSWQHTFIPVLPASMIDIVCCPTPFLVGLLSSSLPKLKELPVEEALMVNLGSDRFIRQ
MDDEDTLLPRKLQAALEQALERKNELISQDSDSDSDDECNTLNGLVSEVFIRFFVETVGHYSLFLTQSEK
GERAFQREAFRKSVASKSIRRFLEVFMESQMFAGFIQDRELRKCRAKGLFEQRVEQYLEELPDTEQSGMN
KFLRGLGNKMKFLHKKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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