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Report for CCDS791.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
791.2 Public Homo sapiens 1 AKNAD1 24 110 108 CCDS HistoryNCBI Gene:254268Re-query CCDS DB by CCDS ID:791.2Re-query CCDS DB by GeneID:254268See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 791.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370001.8 ENSP00000359018.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370001.8Link to Ensembl Protein Viewer:ENSP00000359018.3Re-query CCDS DB by Nucleotide ID:ENST00000370001Re-query CCDS DB by Protein ID:ENSP00000359018
Original member Current member NCBI NM_152763.5 NP_689976.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152763.5Link to Protein Sequence:NP_689976.2Re-query CCDS DB by Nucleotide ID:NM_152763Re-query CCDS DB by Protein ID:NP_689976Link to BLAST:NP_689976.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689976.2 836 Q5T1N1-1 836 100% 0 0

Chromosomal Locations for CCDS 791.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 108816171 108816302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108817048 108817177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108820545 108820626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108823370 108823477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108823566 108823688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108827205 108827302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108830559 108830650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108834447 108834528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108834929 108835056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108837550 108837706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108843134 108843267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108848752 108848814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108848912 108849060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108849537 108849576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108851672 108852664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2511 nt):
ATGGATGAGGCTGATTTTTCAGAACACACGACTTATAAGCAGGAGGATTTGCCTTATGATGGGGACCTCT
CTCAGATTAAGATAGGCAATGATTACAGTTTTACCTCAAAAAAGGATGGCCTTGAAGTCTTAAATCAAAT
TATTTTCATAGCAGATGACCCTCAAGAGAAGGCTATGCATAGTGAGACTTGTGGAAATACAGCTGTGACC
ATACCCCTGGGTAAAATTACTGAAAATGCTGCCAACAAAAAAGACGAGAAAGAGAAACAATGCACTGCAG
CTCTTCATATTCCAGCAAATGAAGGAGACGCTTCTAAGTCAAGCATTTCTGATATTTTACTTCATCATCT
TTCCAAAGAGCCATTCTTAAGAGGTCAAGGCATTGATTGTGAAACCCTCCCAGAGATCTCAAATGCCGAC
AGTTTTGAAGAGGAAGCTATTATTAAAAGTATTATTTCATGTTATAATAAGAATTCTTGGCCAAAAGAAC
AAACCCCAGAACTCACTGACCAACTCAACCCGAAAAGGGATGGTGAAAACAGCAATAAGCCTGGTTCTGC
CACCACGACAGAGGAAAATACCTCTGATTTAGAAGGGCCAGTGGCTGCTGGAGATAGCAGCCATCAAGAA
AATGTGAATGTTCTAACTAAAACCAAGGGTCCAGGTGATAAACAAAAAAGTTATCAAGGGCAGTCACCCC
AGAAACAGCAGACTGAAAAAGCAAATTCAGGCAACACGTTCAAATACGGCCAAGGTCAAGTTCATTACCA
GCTCCCTGATTTCTCTAAGATTGCTCCCAAAGTGAAAATTCCTAAAAATAAGATAATTAATAAACCACTT
GCAATAGCTAAACAAGCCAGCTTTTCTTCCAAGTCGAGAGATAAACCCACTCTTGTGCAAGATAGTCTAG
AAACCACGCCTGAGTCAAACTGTGTTGAAAAACAACATCAAGAGCAGAAAGGGAAAATCACTGAACCTTC
ACAACAAATCCAGATGGAGCCCATAGTACATATCCACCAAGAACTTCTCACAGGAATAGAATCTGAGGCA
AGTCTCTCTAAGTTGTCACCAACCTCTCAGAAAGGCACTTCCTCAAGTTCTTCTTACATATTTCAAAAGA
TATCCCAAGGGAAACAGATGTGTCAGAAGTTGAAAGAACAGACTGATCAACTGAAGACTAAAGTACAAGA
ATTTTCCAAAAGAATAAAACAGGACTCTCCTTACCATTTGCAAGACAAGAAGCTGGTCCTGGAGAAACTG
CAGGGACACCTTGAACTGCTGGAGCAGAACTTTCTGGCCACCAAGGACAAGCATCTGACTTTGCAGCAGC
AAGTCCACAAGCACGAATCAACAATCGTTGGTGACTTTGATCCAGAAAGAAAAGTGGAAGGTGAAATCTT
CAAATTGGAGATGCTGCTTGAAGATGTTAAAGAGAAAATGGATGAAAGCAAATATACTTCAGCTCCTTCC
CTTCCTGTGAGTTCTCCAGTTACCCTGGATGACTTGGCCTCCACCTTCTCTTCACTCTCAAATGAGATTC
CCAAGGAGCACCCCGGCCACCCTTCTGGGCCTCGAGGCTCAGGTGGGAGTGAGGTAACAGGGACACCCCA
AGGAGGGCCGCAGGAGGCCCCCAACGAGGAGCTCTGTGAGCTGGCCCCGCAGACTTACCTAAACGGTCAT
TATGGAGATGCAGCTGCCCAGAACAAGCCAGACCAAGTGGCCATGAGGCTGTCTTCTAACTCTGGGGAGG
ATCCCAACGGCACTCCAAGAAGGCAGGATTGTGCAGAGATGACGGCACCCAGTCCGAGCTGTGCCTTCTG
TCGCAGGCTCCTTGAATGGAAGCAAAACGTGGAGAAAAAGGGCCACGGAAGGATCAACTGTGGAAGATTT
TCAATTGTCCTTCATGAAAAGGCACCACACTCAGATTCAACTCCCAATTCTGATACAGGACACAGCTTCT
GTTCTGATTCTGGCACTGAAATGCAGAGTAACAAATGTCAGGACTGTGGCACTAAGATTCCTACCTCCCG
AAGAGCCTGCAGGAAAGAACCAACTAAAGAATTTCATTATAGATACAACACTCCAGGACAGAATTACTCA
AATCATAGCAAAAGAGGTGCCTTTGTCCAGCCCCATTCTTTAGATGAAAGTAAAAACTCTTCACCCTCTT
TTTTAAAACCCAAACGGATCTGTTCTCAGAGAGTGAATTCAAAATCCTTTAAAGGTGAACATGAGCCCAC
ACCAGGAAAAAAAAAACTTCAGGCTTTCATGACCTACAGCTCAGACCCTGCAACACCCTCACCCCATTTC
TACTCCTGCAGGATTTCTGGAAGCAAATCCTTATGTGACTTTGATAGCACTGAAGAAATAAAATCTGAGA
TTTTAAACTCGGCTTTGGATCATGCCCTAAGGACAGCAACCATTTTGAAAGAAACTACAGATCAAATGAT
TAAAACGATTGCAGAAGACCTTGCTAAAGCACAGAGGTGGAGGAATCGACTGAAATACTAG

Translation (836 aa):
MDEADFSEHTTYKQEDLPYDGDLSQIKIGNDYSFTSKKDGLEVLNQIIFIADDPQEKAMHSETCGNTAVT
IPLGKITENAANKKDEKEKQCTAALHIPANEGDASKSSISDILLHHLSKEPFLRGQGIDCETLPEISNAD
SFEEEAIIKSIISCYNKNSWPKEQTPELTDQLNPKRDGENSNKPGSATTTEENTSDLEGPVAAGDSSHQE
NVNVLTKTKGPGDKQKSYQGQSPQKQQTEKANSGNTFKYGQGQVHYQLPDFSKIAPKVKIPKNKIINKPL
AIAKQASFSSKSRDKPTLVQDSLETTPESNCVEKQHQEQKGKITEPSQQIQMEPIVHIHQELLTGIESEA
SLSKLSPTSQKGTSSSSSYIFQKISQGKQMCQKLKEQTDQLKTKVQEFSKRIKQDSPYHLQDKKLVLEKL
QGHLELLEQNFLATKDKHLTLQQQVHKHESTIVGDFDPERKVEGEIFKLEMLLEDVKEKMDESKYTSAPS
LPVSSPVTLDDLASTFSSLSNEIPKEHPGHPSGPRGSGGSEVTGTPQGGPQEAPNEELCELAPQTYLNGH
YGDAAAQNKPDQVAMRLSSNSGEDPNGTPRRQDCAEMTAPSPSCAFCRRLLEWKQNVEKKGHGRINCGRF
SIVLHEKAPHSDSTPNSDTGHSFCSDSGTEMQSNKCQDCGTKIPTSRRACRKEPTKEFHYRYNTPGQNYS
NHSKRGAFVQPHSLDESKNSSPSFLKPKRICSQRVNSKSFKGEHEPTPGKKKLQAFMTYSSDPATPSPHF
YSCRISGSKSLCDFDSTEEIKSEILNSALDHALRTATILKETTDQMIKTIAEDLAKAQRWRNRLKY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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