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Report for CCDS80363.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80363.1 Public Mus musculus 5 P2rx2 23 108 98 CCDS HistoryNCBI Gene:231602Re-query CCDS DB by CCDS ID:80363.1Re-query CCDS DB by GeneID:231602See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80363.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058016.15 ENSMUSP00000054233.10 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058016.15Link to Ensembl Protein Viewer:ENSMUSP00000054233.10Re-query CCDS DB by Nucleotide ID:ENSMUST00000058016Re-query CCDS DB by Protein ID:ENSMUSP00000054233
Original member Current member NCBI NM_001310700.1 NP_001297629.1 Accepted alive Link to Nucleotide Sequence:NM_001310700.1Link to Protein Sequence:NP_001297629.1Re-query CCDS DB by Nucleotide ID:NM_001310700Re-query CCDS DB by Protein ID:NP_001297629Link to BLAST:NP_001297629.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001297629.1 497 Q8K3P1-5 497 100% 0 0

Chromosomal Locations for CCDS 80363.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 110340193 110340582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110340668 110340733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110340856 110340949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110341101 110341231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110341551 110341689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110341774 110341854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342005 110342101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342178 110342253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342333 110342404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342500 110342671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342780 110342955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1494 nt):
ATGGCCGCTGCACAGCCCCGGCTTCCCGCGGGGGCGGCCATGGTCCGGCGCTTGGCCCGGGGCTGCTGGT
CCGCGTTCTGGGACTACGAGACGCCCAAGGTGATCGTGGTGCGGAATCGGCGCCTGGGATTCGTGCACCG
CATGGTGCAGCTGCTCATTCTGCTTTACTTCGTGTGGGTTGCCTCCGGAGCCGGCACCGCCCTATCCCAC
AGGTACGTCTTCATCGTGCAGAAAAGCTACCAGGATAGCGAAACCGGTCCGGAGAGCTCCATCATCACCA
AAGTCAAGGGGATCACCATGTCGGAACACAAAGTGTGGGACGTGGAGGAATACGTAAAGCCCCCGGAGGG
GGGCAGTGTAGTCAGCATCATCACCAGGATCGAGGTTACTCCTTCCCAGACCCTGGGAACATGCCCAGAG
AGCATGAGGGTTCACAGCTCTACCTGCCATTTAGATGACGACTGTGTGGCCGGACAGCTGGACATGCAGG
GCAATGGGATTCGGACAGGACGCTGTGTACCCTATTACCATGGGGACTCCAAGACCTGCGAGGTGTCAGC
CTGGTGCCCGGTGGAGGATGGGACTTCTGAAAACCATTTTCTGGGTAAAATGGCCCCAAATTTCACCATC
CTCATCAAGAACAGCATCCACTATCCCAAGTTCAAGTTCTCCAAGGGCAACATTGCAAGCCAGAAGAGTG
ACTACCTGAAGCACTGCACGTTTGATCAGGACTCTGATCCATACTGTCCCATCTTCAGGCTGGGCTTCAT
TGTAGAGCAAGCAGGAGAGAACTTCACAGAACTGGCACACAAGGGCGGTGTCATTGGGGTCATCATCAAC
TGGAACTGTGACCTGGACTTGTCTGAATCAGAGTGCAACCCCAAATATTCTTTCCGGAGGCTCGACCCCA
AGTATGACCCTGCCTCTTCAGGCTACAACTTCAGGTTTGCCAAATATTACAAGATAAACGGCACCACCAC
CACTCGAACTCTCATCAAAGCCTATGGGATTCGAATTGACGTTATTGTGCATGGACAGGCAGGGAAATTC
AGTCTCATTCCCACCATCATCAATCTGGCCACTGCTCTGACCTCCATCGGGGTGGGCTCCTTTCTGTGTG
ACTGGATTTTGTTAACGTTCATGAACAAAAACAAGCTCTACAGCCATAAGAAGTTCGACAAGGTGCGTAC
CCCAAGGCACCCCTCAAGTAGATGGCCTGTGACCCTTGCCCTTGTCTTGGGCCAGATCCCTCCCCCACCT
AGTCACTACTCCCAGGACCAGCCACCCAGCCTTCCATCAGGTGAAGGACCAGCTTTGGGAGAAGGGGCAG
AGCTACCACTGGCTGTCCAGCCTCCTCGGTCTTGCTCCAGCTCTGCTCTGACTGAGCAGGTGGTGGACAC
TCTTGACCAGCATATGGGACAAAGGCCTCCTGTCCCTGAGCCTTCCCAACAGGACTCCACATCCACGGAC
CCCAAAGGTTTGGCCCAACTTTGA

Translation (497 aa):
MAAAQPRLPAGAAMVRRLARGCWSAFWDYETPKVIVVRNRRLGFVHRMVQLLILLYFVWVASGAGTALSH
RYVFIVQKSYQDSETGPESSIITKVKGITMSEHKVWDVEEYVKPPEGGSVVSIITRIEVTPSQTLGTCPE
SMRVHSSTCHLDDDCVAGQLDMQGNGIRTGRCVPYYHGDSKTCEVSAWCPVEDGTSENHFLGKMAPNFTI
LIKNSIHYPKFKFSKGNIASQKSDYLKHCTFDQDSDPYCPIFRLGFIVEQAGENFTELAHKGGVIGVIIN
WNCDLDLSESECNPKYSFRRLDPKYDPASSGYNFRFAKYYKINGTTTTRTLIKAYGIRIDVIVHGQAGKF
SLIPTIINLATALTSIGVGSFLCDWILLTFMNKNKLYSHKKFDKVRTPRHPSSRWPVTLALVLGQIPPPP
SHYSQDQPPSLPSGEGPALGEGAELPLAVQPPRSCSSSALTEQVVDTLDQHMGQRPPVPEPSQQDSTSTD
PKGLAQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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