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Report for CCDS80781.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80781.1 Public Mus musculus 7 Dennd5a 23 108 98 CCDS HistoryNCBI Gene:19347Re-query CCDS DB by CCDS ID:80781.1Re-query CCDS DB by GeneID:19347See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80781.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106722.1 ENSMUSP00000102333.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106722.1Link to Ensembl Protein Viewer:ENSMUSP00000102333.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106722Re-query CCDS DB by Protein ID:ENSMUSP00000102333
Original member Current member NCBI NM_001311139.1 NP_001298068.1 Accepted alive Link to Nucleotide Sequence:NM_001311139.1Link to Protein Sequence:NP_001298068.1Re-query CCDS DB by Nucleotide ID:NM_001311139Re-query CCDS DB by Protein ID:NP_001298068Link to BLAST:NP_001298068.1

Chromosomal Locations for CCDS 80781.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 109894632 109894815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109896243 109896411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109896947 109897070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109897904 109897986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109898508 109898689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109899044 109899162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109899724 109899869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109901060 109901181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109905170 109905298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109905696 109905780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109908331 109908415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109911915 109912067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109914721 109914852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109916211 109916304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109917385 109917535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109918594 109918828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109919262 109919477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109921194 109921511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109926827 109927014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109933613 109934270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109934693 109934802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109960074 109960182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3792 nt):
ATGAGCGGCGGCGGCGGCGGAGGGGGCTCGGCGCCCAGTCGCTTCGCCGACTATTTTGTCATCTGCGGGC
TGGACACCGAGACCGGGCTGGAGCCGGACGAGCTGTCGGGAGAAAATTTTGAGCAGACGCCATTGAGACG
AACATTCAAGTCTAAGGTCCTTGCCCGATACCCTGAGAATGTAGACTGGAATCCCTTTGATCAGGATGCA
GTAGGAATGCTGTGCATGCCCAAAGGGCTGGCATTCAAGACCCAGGCTGATCCCAGGGAGCCACAGTTCC
ATGCCTTTATTATCACAAGGGAGGATGGTTCTCGGACATTTGGGTTTGCTCTTACCTTTTATGAAGAAGT
GACCAGCAAGCAAATCTGCAGTGCAATGCAGACCCTCTACCACATGCACAATGCTGAGTATGATGTCCTT
CATGCTCCACTTGCTGATGGTGGAGACCAGAGTGGCATGGAAGATGGTGAAGGCATTCCTGGGACCAAGC
TGCAGCGCTTCAACTCCTATGATATTAGCAGGGACACACTCTATGTCTCTAAATGCATCTGTCTCATTAC
ACCCATGTCTTTCATGAAGGCATGTCGGAGTGTGCTGCAGCAGCTCCACCAGGCAGTCACATCGCCTCAG
CCCCCTCCTCTGCCCCTTGAGAGCTACATATACAACGTACTCTATGAGGTGCCACTTCCACCTCCTGGCC
GCTCCCTAAAGTTTTCTGGGGTCTATGGGCCAATAATCTGCCAGAGACCAAGTACCAATGAGCTTCCTCT
ATTCGATTTTCCCGTCAAAGAGGTCTTTGAACTGCTTGGGGTGGAGAATGTGTTTCAGCTTTTTACTTGT
GCCCTTCTGGAGTTTCAAATACTGCTCTACTCACAGCATTACCAGAGACTGATGACTGTGGCGGAGACAA
TTACAGCTCTGATGTTTCCTTTCCAGTGGCAGCATGTCTATGTCCCCATCCTCCCAGCTTCTCTCCTGCA
TTTCTTAGATGCTCCTGTACCATACCTGATGGGCTTGCATTCCAACGGCCTGGATGACCGCTCCAAGTTG
GAGCTGCCTCAGGAGGCTAACCTCTGCTTTGTGGATGTTGACAACCACTTCATTGAGTTGCCAGAGGACT
TGCCTCAATTTCCCAACAAACTGGAGTTTGTCCAGGAGGTCTCTGAGATCCTCATGGCCTTTGGCGTTCC
CCCTGAAGGGAACCTCCATTGCAGCGAAAGCGCCTCAAAGCTGAAGAGGATCCGAGCTTCTGAGCTTGTG
TCTGACAAGAGGAACGGGAACATTGCGGGCTCCCCTTTGCACTCCTATGAGCTCCTCAAGGAAAATGAAA
CTATTGCTCGGTTGCAAGCTTTGGTCAAGAGGACTGGAGTGAGTTTGGAAAAACTGGAAGTTCGTGAAGA
TCCCAGTAGCAATAAAGATTTCAAAGTTCAATGTGATGAAGAAGAGCTCAGGATTTACCAGCTAAACATT
CAAATCCGGGAAGTCTTTGCCAATCGCTTTACTCAGATGTTTGCCGATTATGAAGTGTTTGTCATCCAGC
CCAGCCAGGATAAGGAGTCCTGGTTCACCAACAGGGAACAGATGCAGAACTTTGATAAAGCATCCTTCCT
GTCAGATCAGCCTGAGCCCTACCTGCCCTTCCTCTCAAGATTCCTAGAGACCCAGATGTTTGCATCTTTT
ATTGATAACAAGATCATGTGTCATGATGATGATGATAAAGACCCTGTCCTCCGGGTCTTTGACTCAAGGG
TAGACAAGATCAGACTGTTGAATGTTCGAACACCTACTCTTAGGACATCTATGTACCAGAAGTGTACCAC
TGTGGATGAAGCAGAAAAAGCAATTGAACTACGTCTGGCAAAAATTGACCATACTGCAGTTCACCCACAT
CTTCTTGACATGAAAATTGGACAAGGAAAATATGAACCTGGCTTTTTCCCTAAGCTGCAGTCTGATGTGC
TTTGCACCGGGCCAGCCAGCAACAAGTGGACAAAAAGGAATGCCCCTGCACAGTGGAGGCGGAAAGACCG
GCAGAAGCAGCACACAGAACACTTGCGCTTAGACAATGACCAGAGAGAGAAGTACATCCAGGAAGCCAGG
AATATGGGCAGTACCATCCGTCAGCCCAAACTGTCCAACCTCTCTCCATCAGTCATTGCCCAGACCAACT
GGAAGTTTGTAGAAGGCCTGCTGAAGGAATGTCGAAACAAGACCAAGAGGATGCTGGTAGAGAAGATGGG
TCGAGAGGCCGTGGAGCTGGGGCATGGGGAGGTGAACATCACCGGTGTGGAAGAGAACACTTTGATTGCC
AGCCTCTGTGACCTTCTGGAGAGGATCTGGAGCCATGGGCTACAAGTGAAGCAGGGGAAATCAGCTTTGT
GGTCCCATCTGTTACATTATCAGGAAAACCGGCAGAGAAAACTCACATCAGGAAGCCTTAGTACCTCAGG
AATACTTCTTGATTCAGAACGGAGAAAGTCTGATGCCAGTGCCGTCATGTCTCCCCTGAGGATTTCCCTA
ATTCAGGATATGAGGCACATCCAGAATATTGGGGAAATCAAGACTGATGTGGGAAAAGCCAGAGCATGGG
TGCGACTGTCCATGGAGAAGAAATTACTGTCCAGACACCTGAAGCAGCTTCTTTCAGACCATGAGCTCAC
CAAGAAGCTGTACAAGCGTTACGCCTTCCTGCGCTGTGATGACGAGAAGGAGCAGTTCCTCTATCACCTG
CTCTCCTTCAACGCAGTGGACTACTTCTGCTTCACCAACGTCTTTACAACCATCCTGATTCCATACCACA
TTTTGATTGTACCAAGCAAGAAGCTGGGCGGCTCCATGTTCACCGCCAACCCGTGGATCTGTATATCAGG
AGAGCTGGGTGAGACCCAGATCCTGCAGATCCCCAGGAATGTGCTAGAGATGACGTTTGAGTGCCAGAAC
CTGGGGAAGCTCACCACTGTCCAGATTGGCCATGATAATTCTGGGCTGTATGCCAAGTGGCTTGTGGAAT
GTGTGATGGTCAGGAATGAGGTCACAGGACACACCTACAAGTTTCCGTGTGGCCGATGGCTGGGGAAGGG
TATGGACGACGGAAGCTTGGAGCGCGTGCTTGTTGGGGAGCTGCTCACTTCCCTACCTGAGGTGGATGAG
AGGCCTTGTCGCACTCCGCCACTACAGCAGTCCCCCAGTGTCATCCGGAGACTTGTGACCATCTCGCCCA
ACAATAAGCCCAAGCTGAACACTGGGCAGATCCAGGAGTCCATTGGGGAGGCAGTCAATGGCATTGTGAA
GCACTTCCATAAACCTGAGAAAGAGCGTGGCAGCCTGACACTGTTGCTCTGTGGAGAGTGTGGTCTCGTT
TCAGCACTGGAACAAGCTTTTCAGCATGGATTTAAATCACCCCGGCTCTTCAAAAATGTCTTCATTTGGG
ATTTCCTGGAGAAAGCACAAACCTATTATGAGACGTTAGAGCAGAATGACGTAGTTCCAGAAGAAAACTG
GCACACACGGGCCCGCAATTTCTGCCGCTTTGTCACTGCAGTCAACAACACGCCCCGGAACATTGGCAAG
GACGGCAAATTTCAGATGCTGGTGTGCCTGGGAGCCAGAGATCACCTCCTGCACCACTGGATAGCCTTGC
TGGCCGACTGCCCCATCACTGCGCACATGTATGAGGACGTGGCGCTGATCAAGGACCACACACTCGTCAA
TTCCTTGATCCGAGTGCTGCAGACCCTGCAAGAATTCAACATCACACTGGACACTTCCCTCGTTAAGGGC
ATTGACATCTGA

Translation (1263 aa):
MSGGGGGGGSAPSRFADYFVICGLDTETGLEPDELSGENFEQTPLRRTFKSKVLARYPENVDWNPFDQDA
VGMLCMPKGLAFKTQADPREPQFHAFIITREDGSRTFGFALTFYEEVTSKQICSAMQTLYHMHNAEYDVL
HAPLADGGDQSGMEDGEGIPGTKLQRFNSYDISRDTLYVSKCICLITPMSFMKACRSVLQQLHQAVTSPQ
PPPLPLESYIYNVLYEVPLPPPGRSLKFSGVYGPIICQRPSTNELPLFDFPVKEVFELLGVENVFQLFTC
ALLEFQILLYSQHYQRLMTVAETITALMFPFQWQHVYVPILPASLLHFLDAPVPYLMGLHSNGLDDRSKL
ELPQEANLCFVDVDNHFIELPEDLPQFPNKLEFVQEVSEILMAFGVPPEGNLHCSESASKLKRIRASELV
SDKRNGNIAGSPLHSYELLKENETIARLQALVKRTGVSLEKLEVREDPSSNKDFKVQCDEEELRIYQLNI
QIREVFANRFTQMFADYEVFVIQPSQDKESWFTNREQMQNFDKASFLSDQPEPYLPFLSRFLETQMFASF
IDNKIMCHDDDDKDPVLRVFDSRVDKIRLLNVRTPTLRTSMYQKCTTVDEAEKAIELRLAKIDHTAVHPH
LLDMKIGQGKYEPGFFPKLQSDVLCTGPASNKWTKRNAPAQWRRKDRQKQHTEHLRLDNDQREKYIQEAR
NMGSTIRQPKLSNLSPSVIAQTNWKFVEGLLKECRNKTKRMLVEKMGREAVELGHGEVNITGVEENTLIA
SLCDLLERIWSHGLQVKQGKSALWSHLLHYQENRQRKLTSGSLSTSGILLDSERRKSDASAVMSPLRISL
IQDMRHIQNIGEIKTDVGKARAWVRLSMEKKLLSRHLKQLLSDHELTKKLYKRYAFLRCDDEKEQFLYHL
LSFNAVDYFCFTNVFTTILIPYHILIVPSKKLGGSMFTANPWICISGELGETQILQIPRNVLEMTFECQN
LGKLTTVQIGHDNSGLYAKWLVECVMVRNEVTGHTYKFPCGRWLGKGMDDGSLERVLVGELLTSLPEVDE
RPCRTPPLQQSPSVIRRLVTISPNNKPKLNTGQIQESIGEAVNGIVKHFHKPEKERGSLTLLLCGECGLV
SALEQAFQHGFKSPRLFKNVFIWDFLEKAQTYYETLEQNDVVPEENWHTRARNFCRFVTAVNNTPRNIGK
DGKFQMLVCLGARDHLLHHWIALLADCPITAHMYEDVALIKDHTLVNSLIRVLQTLQEFNITLDTSLVKG
IDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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