NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS81125.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81125.1 Public Mus musculus X Xpnpep2 23 108 98 CCDS HistoryNCBI Gene:170745Re-query CCDS DB by CCDS ID:81125.1Re-query CCDS DB by GeneID:170745See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81125.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115000.3 ENSMUSP00000110652.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115000.3Link to Ensembl Protein Viewer:ENSMUSP00000110652.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000115000Re-query CCDS DB by Protein ID:ENSMUSP00000110652
Original member Current member NCBI NM_001289729.1 NP_001276658.1 Accepted alive Link to Nucleotide Sequence:NM_001289729.1Link to Protein Sequence:NP_001276658.1Re-query CCDS DB by Nucleotide ID:NM_001289729Re-query CCDS DB by Protein ID:NP_001276658Link to BLAST:NP_001276658.1

Chromosomal Locations for CCDS 81125.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 48109146 48109194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48111725 48111798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48113677 48113787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48115928 48115991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48116952 48117056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48117278 48117364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48118335 48118481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48121801 48122103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48122529 48122610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48122888 48123083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48123839 48123928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48124616 48124725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48125345 48125422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48126869 48126940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48128725 48128785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48130047 48130116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48130679 48130783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48131148 48131207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48131898 48131974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48135085 48135174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48135735 48135929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2226 nt):
ATGGCCCAAGCCTACTGGCAGTGCTACCCCTGGCTTGTTCTCCTCTGTGCATGTGCCTGGAGCTACCCAG
AGCCCAAGTACCTTGGAAGGGAAGATGTGAGAAACTGTTCAACCAGCCCTGAGCGCCTGCCAGTTACTGC
CGTCAATACAACAATGCGGCTTGCAGCCCTCCGCCAACAGATGGAGACCTGGAATCTCTCTGCCTACATC
ATCCCAGACACGGATGCACACATGAGTGAGTACATTGGCAAACCTGATAAGAGGCGAGAGTGGATTTCAG
GCTTCACAGGGTCTGCAGGTACTGCTGTGGTGACCATGGGGAAAGCAGCTGTCTGGACCGATAGTCGTTA
CTGGACTCAGGCCGAAAGGCAGATGGACTGCAACTGGGAGCTGCACAAGGAAGTTAGCATTTCTTCCATT
GTCGCCTGGATCTTAGCTGAAGTCCCTGATGGACAGAACGTGGGCTTCGACCCCTTCCTCTTTTCTGTTG
ATTCCTGGAAAAATTATGATCAAGGATTCCAAGACTCCAGCAGACACCTGTTATCGGTTACAACCAACCT
TGTTGACGTGGCATGGGGGTCAGAGAGGCCCCCAGTGCCAAGCCAACCCATTTATGCCCTGCCGAAAGAA
TTTACAGGGAGCACTTGGCAGGAAAAAGTATCCGCTGTCCGAAGCTATATGGAGCACCATGCCAAGACTC
CAACTGGGGTCCTTCTATCTGCACTTGATGAGACAGCCTGTGAGTGGGGATTTTTGAACATGGGTCAGTC
TGGTAGTCCCAAGCTTCCTGGACCTTGCAACATACAGCTTTTCCTAAAACAACAACATATTCACCAGCTC
CTACGAGCTCCCAAGATCATAGTCTGTGGAAACTCAGAGGGGAAGAGAGCAGCTGTTTGGGGCTATAGAA
CAAGGAAGCCAGGGAGCTCCAAGCAAGTGGGGCTCTTCAACCTTCGTAGCAGTGACATCCCCTATAACCC
CTTCTTCTACTCCTATGCACTGCTCACGAACTCCTCCATCAGGTTGTTTGTCAACAAGAGTCGCTTTAGC
CTTGAGACCTTGCAGTACCTGAATACAAACTGCACATTACCCATGTGTGTGCAACTTGAGGACTACAGTC
AAGTTCGTGACAGTGTGAAGGCCTATGCCTCAGGCGATGTGAAAATCTTAATTGGGGTCAGCTATACCAC
CTATGGGGTCTATGAAGTGATACCCAAGGAGAAACTCGTGACAGACACCTACTCCCCAGTGATGTTAATC
AAGGCTGTGAAGAACAGCAAGGAGCAGGCCCTTTTGAAGAGCAGCCACGTGCGGGACGCTGTGGCTGTGA
TCCAGTACTTGGTCTGGTTGGAGAAGAACGTGCCCAAAGGCACGGTGGATGAGTTTTCTGGGGCAGAATA
CATTGATGAGTTACGACGGAATGAAAACTTCTCCTCTGGACCCAGTTTTGAAACCATCTCTGCTAGTGGC
CTGAATGCCGCCCTGGCCCATTACAGCCCAACAAAAGAGCTGCACCGTAAGCTGTCCTCAGATGAGATGT
ACCTGGTGGATTCTGGGGGGCAATACTGGGATGGGACCACAGATATCACCAGAACAGTACATTGGGGCAC
TCCTACTGCCTTCCAAAAGGAGGCCTATACTCGAGTGCTAATGGGAAACATCGATCTGTCCAGACTTGTC
TTTCCTGCTGCTACATCAGGGAGAGTGATAGAAGCCTTTGCCCGAAGAGCCTTATGGGAAGTTGGGCTCA
ATTATGGTCATGGGACAGGCCATGGCATTGGCAACTTCCTCTGTGTGCATGAGTGGCCAGTGGGATTCCA
GTATAACAACATTGCCATGGCCAAGGGCATGTTCACTTCCATTGAACCTGGATACTACCATGATGGGGAG
TTTGGAATCCGTCTTGAAGATGTCGCCCTTGTGGTAGAAGCAAAAACCAAGTACCCAGGGGACTACCTGA
CTTTTGAATTGGTGTCCTTTGTGCCCTATGACCGAAACCTCATCGATGTCAGGCTGCTGTCCCCAGAGCA
GCTCCAGTACCTGAACCGCTACTATCAGACCATTCGTGAGAATGTAGGCCCAGAGCTGCAGCGTCGCCAG
CTGCTGGAGGAGTTTGCATGGTTGGAGCAGCACACGGAGCCCCTGTCAGCCAGGGCCCCTCATATCATCT
CCTGGACCTCTCTGTGGGTGGCCTCTGCCCTTGCCATCCTCAGCTGGAGTAGCTAG

Translation (741 aa):
MAQAYWQCYPWLVLLCACAWSYPEPKYLGREDVRNCSTSPERLPVTAVNTTMRLAALRQQMETWNLSAYI
IPDTDAHMSEYIGKPDKRREWISGFTGSAGTAVVTMGKAAVWTDSRYWTQAERQMDCNWELHKEVSISSI
VAWILAEVPDGQNVGFDPFLFSVDSWKNYDQGFQDSSRHLLSVTTNLVDVAWGSERPPVPSQPIYALPKE
FTGSTWQEKVSAVRSYMEHHAKTPTGVLLSALDETACEWGFLNMGQSGSPKLPGPCNIQLFLKQQHIHQL
LRAPKIIVCGNSEGKRAAVWGYRTRKPGSSKQVGLFNLRSSDIPYNPFFYSYALLTNSSIRLFVNKSRFS
LETLQYLNTNCTLPMCVQLEDYSQVRDSVKAYASGDVKILIGVSYTTYGVYEVIPKEKLVTDTYSPVMLI
KAVKNSKEQALLKSSHVRDAVAVIQYLVWLEKNVPKGTVDEFSGAEYIDELRRNENFSSGPSFETISASG
LNAALAHYSPTKELHRKLSSDEMYLVDSGGQYWDGTTDITRTVHWGTPTAFQKEAYTRVLMGNIDLSRLV
FPAATSGRVIEAFARRALWEVGLNYGHGTGHGIGNFLCVHEWPVGFQYNNIAMAKGMFTSIEPGYYHDGE
FGIRLEDVALVVEAKTKYPGDYLTFELVSFVPYDRNLIDVRLLSPEQLQYLNRYYQTIRENVGPELQRRQ
LLEEFAWLEQHTEPLSARAPHIISWTSLWVASALAILSWSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH