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Report for CCDS81831.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81831.1 Public Homo sapiens 14 NRXN3 24 110 108 CCDS HistoryNCBI Gene:9369Re-query CCDS DB by CCDS ID:81831.1Re-query CCDS DB by GeneID:9369See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81831.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335750.7 ENSP00000338349.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335750.7Link to Ensembl Protein Viewer:ENSP00000338349.7Re-query CCDS DB by Nucleotide ID:ENST00000335750Re-query CCDS DB by Protein ID:ENSP00000338349
Original member Current member NCBI NM_001330195.2 NP_001317124.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001330195.2Link to Protein Sequence:NP_001317124.1Re-query CCDS DB by Nucleotide ID:NM_001330195Re-query CCDS DB by Protein ID:NP_001317124Link to BLAST:NP_001317124.1

Chromosomal Locations for CCDS 81831.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 78243094 78243802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78278645 78278662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78297831 78297860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78645120 78645421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78651165 78651326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78709217 78709655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78714756 78715139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78803620 78803823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78810318 78810344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78957242 78957361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78966025 78966406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78967208 78967398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78968173 78968346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78988022 78988141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79467221 79467402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79663778 79663949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79692173 79692262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79697630 79697937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79805112 79805190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79861342 79861964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4716 nt):
ATGAGCTCCACACTCCACTCGGTTTTCTTCACCCTGAAGGTCAGCATCCTGCTGGGGTCCCTGCTGGGGC
TCTGCCTGGGCCTTGAGTTCATGGGCCTCCCCAACCAGTGGGCCCGCTACCTCCGCTGGGATGCCAGCAC
ACGCAGTGACCTGAGTTTCCAGTTCAAGACCAACGTCTCTACGGGGCTGCTCCTCTACCTGGATGATGGC
GGCGTCTGCGACTTCCTATGCCTCTCCCTGGTGGATGGCCGCGTTCAGCTCCGCTTCAGCATGGACTGTG
CCGAGACTGCCGTGCTGTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAGCCGTGA
CCGCCTGCGCACGGTGCTGATGCTTGATGGCGAGGGCCAGTCTGGGGAGCTGCAGCCCCAGCGGCCCTAC
ATGGATGTGGTCAGTGACTTGTTCCTTGGTGGAGTCCCTACTGACATACGACCTTCTGCCCTGACCCTTG
ATGGAGTTCAGGCCATGCCCGGCTTCAAGGGGTTAATTCTGGATCTCAAGTATGGAAACTCGGAGCCTCG
GCTTCTGGGGAGCCGGGGTGTCCAGATGGATGCCGAGGGACCCTGTGGTGAGCGTCCCTGTGAAAATGGT
GGGATCTGCTTTCTCCTGGACGGCCACCCCACCTGTGACTGTTCTACCACTGGCTATGGTGGCAAGCTCT
GCTCAGAAGATGTCAGTCAAGATCCAGGCCTCTCCCACCTCATGATGAGTGAACAAGCTCGAGAGGAGAA
TGTGGCCACTTTCCGAGGCTCAGAGTATCTGTGCTACGACCTGTCTCAGAACCCGATCCAGAGCAGCAGT
GATGAAATCACCCTCTCCTTTAAGACCTGGCAGCGTAACGGCCTCATCCTGCACACGGGCAAGTCGGCTG
ACTATGTCAACCTGGCTCTGAAGGATGGTGCGGTCTCCTTGGTCATTAACCTGGGGTCCGGGGCCTTTGA
GGCCATTGTGGAGCCAGTGAATGGAAAATTCAACGACAACGCCTGGCATGATGTCAAAGTGACACGCAAC
CTCCGGCAGGTGACAATCTCTGTGGATGGCATTCTTACCACGACGGGCTACACTCAAGAGGACTATACCA
TGCTGGGCTCGGACGACTTCTTCTATGTAGGAGGAAGCCCAAGTACCGCTGACTTGCCTGGCTCCCCTGT
CAGCAACAACTTCATGGGCTGCCTTAAAGAGGTTGTTTATAAGAATAATGACATCCGTCTGGAGCTGTCT
CGCCTGGCCCGGATTGCGGACACCAAGATGAAAATCTATGGCGAAGTTGTGTTTAAGTGTGAGAATGTGG
CCACACTGGACCCCATCAACTTTGAGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGAACACTAAACG
TATGGGCTCCATCTCCTTTGACTTCCGCACCACAGAGCCCAATGGCCTGATCCTCTTCACTCATGGAAAG
CCCCAAGAGAGGAAGGATGCTCGGAGCCAGAAGAATACAAAAGTAGACTTCTTTGCCGTGGAACTCCTCG
ATGGCAACCTGTACTTGCTGCTTGACATGGGCTCTGGCACCATCAAAGTGAAAGCCACTCAGAAGAAAGC
CAATGATGGGGAATGGTACCATGTGGACATTCAGCGAGATGGCAGATCAGGTACTATATCAGTGAACAGC
AGGCGCACGCCATTCACCGCCAGTGGGGAGAGCGAGATCCTGGACCTGGAAGGAGACATGTACCTGGGAG
GGCTGCCGGAGAACCGTGCTGGCCTTATTCTCCCCACCGAGCTGTGGACTGCCATGCTCAACTATGGCTA
CGTGGGCTGCATCCGCGACCTATTCATTGATGGGCGCAGCAAGAACATTCGACAGCTGGCAGAGATGCAG
AATGCTGCGGGTGTCAAGTCCTCCTGTTCACGGATGAGTGCCAAGCAGTGTGACAGCTACCCCTGCAAGA
ATAATGCTGTGTGCAAGGACGGCTGGAACCGCTTCATCTGCGACTGCACCGGCACCGGATACTGGGGAAG
AACCTGCGAAAGGGAGGCATCCATCCTGAGCTATGATGGTAGCATGTACATGAAGATCATCATGCCCATG
GTCATGCATACTGAGGCAGAGGATGTGTCCTTCCGCTTCATGTCCCAGCGAGCTTATGGGCTGCTGGTGG
CTACGACCTCCAGGGACTCTGCCGACACCCTGCGTCTGGAGCTGGATGGGGGGCGTGTCAAGCTCATGGT
TAACTTAGACTGTATCAGGATAAACTGTAACTCCAGCAAAGGACCAGAGACCTTGTATGCAGGGCAGAAG
CTCAATGACAACGAGTGGCACACCGTTCGGGTGGTGCGGAGAGGAAAAAGCCTTAAGTTAACCGTGGATG
ATGATGTGGCTGAGGGTACAATGGTGGGAGACCATACCCGTTTGGAGTTCCACAACATTGAAACGGGAAT
CATGACTGAGAAACGCTACATCTCCGTTGTCCCCTCCAGCTTTATTGGCCATCTGCAGAGCCTCATGTTT
AATGGCCTTCTCTACATTGACTTGTGCAAAAATGGTGACATTGATTATTGTGAGCTGAAGGCTCGTTTTG
GACTGAGGAACATCATCGCTGACCCTGTCACCTTTAAGACCAAGAGCAGCTACCTGAGCCTTGCCACTCT
TCAGGCTTACACCTCCATGCACCTCTTCTTCCAGTTCAAGACCACCTCACCAGATGGCTTCATTCTCTTC
AATAGTGGTGATGGCAATGACTTCATTGCAGTCGAGCTTGTCAAGGGGTATATACACTACGTTTTTGACC
TCGGAAACGGTCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTGGCACAATGT
CGTCATCACTCGGGACAATAGTAACACTCATAGCCTGAAAGTGGACACCAAAGTGGTCACTCAGGTTATC
AATGGTGCCAAAAATCTGGATTTGAAAGGTGATCTCTATATGGCTGGTCTGGCCCAAGGCATGTACAGCA
ACCTCCCAAAGCTCGTGGCCTCTCGAGATGGCTTTCAGGGCTGTCTAGCATCAGTGGACTTGAATGGACG
CCTGCCAGACCTCATCAATGATGCTCTTCATCGGAGCGGACAGATCGAGCGTGGCTGTGAAGGACCCAGT
ACCACCTGCCAGGAAGATTCATGTGCCAACCAGGGGGTCTGCATGCAACAATGGGAGGGCTTCACCTGTG
ATTGTTCTATGACCTCTTATTCTGGAAACCAGTGCAATGATCCTGGCGCTACGTACATCTTTGGGAAAAG
TGGTGGGCTTATCCTCTACACCTGGCCAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTG
GGCTTCAGCACCACTGTGAAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCC
TCCAGCTTCACATAGAACAGGGGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGACATCTCCATCAA
AGAGGAGAGAACCCCTGTAAATGACGGCAAATACCATGTGGTACGCTTCACCAGGAACGGCGGCAACGCC
ACCCTGCAGGTGGACAACTGGCCAGTGAATGAACATTATCCTACAGGCAACACTGATAATGAACGCTTCC
AAATGGTAAAACAGAAAATCCCCTTCAAATATAATCGGCCTGTAGAGGAGTGGCTGCAGGAAAAAGGCCG
GCAGTTAACCATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAA
GGCCAACTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATA
TTAAAATCAATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTC
CATGCCACCAGAAATGTCTACTACTGTCATGGAAACCACTACTACAATGGCGACTACCACAACCCGTAAG
AATCGCTCTACAGCCAGCATTCAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATG
ATGAAGACTTTGTTGAATGTGAGCCGAGTACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTA
CAAAGCACATGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACT
ACTACCACATCTTTATCCCCTGAGCTGATCCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAAT
TGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATATAGTCTTGCTTCCGTTGCCCAC
TGCCTATGAGCTAGACAGCACCAAACTGAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCC
ACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCGAGCA
GCACAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCAT
GTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGGAACTACATCAGCAACTCC
GCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAA
ACAAGGACAGGGAGTATTACGTGTAA

Translation (1571 aa):
MSSTLHSVFFTLKVSILLGSLLGLCLGLEFMGLPNQWARYLRWDASTRSDLSFQFKTNVSTGLLLYLDDG
GVCDFLCLSLVDGRVQLRFSMDCAETAVLSNKQVNDSSWHFLMVSRDRLRTVLMLDGEGQSGELQPQRPY
MDVVSDLFLGGVPTDIRPSALTLDGVQAMPGFKGLILDLKYGNSEPRLLGSRGVQMDAEGPCGERPCENG
GICFLLDGHPTCDCSTTGYGGKLCSEDVSQDPGLSHLMMSEQAREENVATFRGSEYLCYDLSQNPIQSSS
DEITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRN
LRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRLELS
RLARIADTKMKIYGEVVFKCENVATLDPINFETPEAYISLPKWNTKRMGSISFDFRTTEPNGLILFTHGK
PQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNS
RRTPFTASGESEILDLEGDMYLGGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQ
NAAGVKSSCSRMSAKQCDSYPCKNNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKIIMPM
VMHTEAEDVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAGQK
LNDNEWHTVRVVRRGKSLKLTVDDDVAEGTMVGDHTRLEFHNIETGIMTEKRYISVVPSSFIGHLQSLMF
NGLLYIDLCKNGDIDYCELKARFGLRNIIADPVTFKTKSSYLSLATLQAYTSMHLFFQFKTTSPDGFILF
NSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVI
NGAKNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIERGCEGPS
TTCQEDSCANQGVCMQQWEGFTCDCSMTSYSGNQCNDPGATYIFGKSGGLILYTWPANDRPSTRSDRLAV
GFSTTVKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYHVVRFTRNGGNA
TLQVDNWPVNEHYPTGNTDNERFQMVKQKIPFKYNRPVEEWLQEKGRQLTIFNTQAQIAIGGKDKGRLFQ
GQLSGLYYDGLKVLNMAAENNPNIKINGSVRLVGEVPSILGTTQTTSMPPEMSTTVMETTTTMATTTTRK
NRSTASIQPTSDDLVSSAECSSDDEDFVECEPSTDKSLSTSIFEGGYKAHAPKWESKDFRPNKVSETSRT
TTTSLSPELIRFTASSSSGMVPKLPAGKMNNRDLKPQPDIVLLPLPTAYELDSTKLKSPLITSPMFRNVP
TANPTEPGIRRVPGASEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNS
AQSNGTLMKEKQQSSKSGHKKQKNKDREYYV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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