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Report for CCDS81910.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81910.1 Public Homo sapiens 15 PSTPIP1 24 110 108 CCDS HistoryNCBI Gene:9051Re-query CCDS DB by CCDS ID:81910.1Re-query CCDS DB by GeneID:9051See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81910.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000559295.5 ENSP00000452743.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559295.5Link to Ensembl Protein Viewer:ENSP00000452743.1Re-query CCDS DB by Nucleotide ID:ENST00000559295Re-query CCDS DB by Protein ID:ENSP00000452743
Original member Current member NCBI NM_001321135.2 NP_001308064.1 Accepted alive Link to Nucleotide Sequence:NM_001321135.2Link to Protein Sequence:NP_001308064.1Re-query CCDS DB by Nucleotide ID:NM_001321135Re-query CCDS DB by Protein ID:NP_001308064Link to BLAST:NP_001308064.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308064.1 397 O43586-2 397 100% 0 0

Chromosomal Locations for CCDS 81910.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 76995574 76995609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77018148 77018248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77018457 77018531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77025284 77025318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77025498 77025604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77027852 77027914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77028554 77028652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77029529 77029574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77030502 77030581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77031180 77031278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77032298 77032428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77035508 77035563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77035802 77035935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77037045 77037176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1194 nt):
ATGATGCCCCAGCTGCAGTTCAAAGATGCCTTTTGGTGCAGGGACTTCACAGCCCACACGGGCTACGAGG
TGCTGCTGCAGCGGCTTCTGGATGGCAGGAAGATGTGCAAAGACATGGAGGAGCTACTGAGGCAGAGGGC
CCAGGCGGAGGAGCGGTACGGGAAGGAGCTGGTGCAGATCGCACGGAAGGCAGGTGGCCAGACGGAGATC
AACTCCCTGAGGGCCTCCTTTGACTCCTTGAAGCAGCAAATGGAGAATGTGGGCAGCTCACACATCCAGC
TGGCCCTGACCCTGCGTGAGGAGCTGCGGAGTCTCGAGGAGTTTCGTGAGAGGCAGAAGGAGCAGAGGAA
GAAGTATGAGGCCGTCATGGACCGGGTCCAGAAGAGCAAGCTGTCGCTCTACAAGAAGGCCATGGAGTCC
AAGAAGACATACGAGCAGAAGTGCCGGGACGCGGACGACGCGGAGCAGGCCTTCGAGCGCATTAGCGCCA
ACGGCCACCAGAAGCAGGTGGAGAAGAGTCAGAACAAAGCCAGGCAGTGCAAGGACTCGGCCACCGAGGC
AGAGCGGGTATACAGGCAGAGCATTGCGCAGCTGGAGAAGGTCCGGGCTGAGTGGGAGCAGGAGCACCGG
ACCACCTGTGAGGCCTTTCAGCTGCAAGAGTTTGACCGGCTGACCATTCTCCGCAACGCCCTGTGGGTGC
ACAGCAACCAGCTCTCCATGCAGTGTGTCAAGGATGATGAGCTCTACGAGGAAGTGCGGCTGACGCTGGA
AGGCTGCAGCATAGACGCCGACATCGACAGTTTCATCCAGGCCAAGAGCACGGGCACAGAGCCCCCCGGT
GAGGTCCGGCTTGCGGACAGCGCAGCCTCTAGGTTCTCTGGACTGCTGCACGGAAGTCCCAAGACCACTT
CGTTGGCAGCTTCTGCTGCGTCCACAGAGACCCTGACCCCCACCCCCGAGCGGAATGAGGGTGTCTACAC
AGCCATCGCAGTGCAGGAGATACAGGGAAACCCGGCCTCACCAGCCCAGGAGTACCGGGCGCTCTACGAT
TATACAGCGCAGAACCCAGATGAGCTGGACCTGTCCGCGGGAGACATCCTGGAGGTGATCCTGGAAGGGG
AGGATGGCTGGTGGACTGTGGAGAGGAACGGGCAGCGTGGCTTCGTCCCTGGTTCCTACCTGGAGAAGCT
TTGA

Translation (397 aa):
MMPQLQFKDAFWCRDFTAHTGYEVLLQRLLDGRKMCKDMEELLRQRAQAEERYGKELVQIARKAGGQTEI
NSLRASFDSLKQQMENVGSSHIQLALTLREELRSLEEFRERQKEQRKKYEAVMDRVQKSKLSLYKKAMES
KKTYEQKCRDADDAEQAFERISANGHQKQVEKSQNKARQCKDSATEAERVYRQSIAQLEKVRAEWEQEHR
TTCEAFQLQEFDRLTILRNALWVHSNQLSMQCVKDDELYEEVRLTLEGCSIDADIDSFIQAKSTGTEPPG
EVRLADSAASRFSGLLHGSPKTTSLAASAASTETLTPTPERNEGVYTAIAVQEIQGNPASPAQEYRALYD
YTAQNPDELDLSAGDILEVILEGEDGWWTVERNGQRGFVPGSYLEKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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