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Report for CCDS81987.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81987.1 Public Homo sapiens 16 KIFC3 24 110 108 CCDS HistoryNCBI Gene:3801Re-query CCDS DB by CCDS ID:81987.1Re-query CCDS DB by GeneID:3801See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81987.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000543930.5 ENSP00000444012.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543930.5Link to Ensembl Protein Viewer:ENSP00000444012.1Re-query CCDS DB by Nucleotide ID:ENST00000543930Re-query CCDS DB by Protein ID:ENSP00000444012
Original member Current member NCBI NM_001318713.2 NP_001305642.1 Accepted alive Link to Nucleotide Sequence:NM_001318713.2Link to Protein Sequence:NP_001305642.1Re-query CCDS DB by Nucleotide ID:NM_001318713Re-query CCDS DB by Protein ID:NP_001305642Link to BLAST:NP_001305642.1

Chromosomal Locations for CCDS 81987.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57759149 57759153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57759728 57759836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57760282 57760416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57760726 57760955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57761042 57761171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57761413 57761536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57762140 57762270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57764143 57764238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57765459 57765640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57766874 57766985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57769595 57769725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57769808 57769955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57770527 57770700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57771198 57771437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57771543 57771650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2055 nt):
ATGGTGGAGAATGAGCGACTGAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAA
AGCCAGCAGGTCCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCTGTCCCA
GCTGCAGCTGGAGATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACC
GACCGGCTGGCTGAGGTGGAGCTGCGACTCAAGGACTGCCTGGCTGAGAAGGCACAGGAGGAGGAGCGGC
TTAGTCGGCGCCTGCGTGACAGCCACGAGACCATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAAGTA
TGTCATCAAGACAGTGGAGGTGGAGTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAAC
CAGCACCTGCAGGAGCAGGTGGCTATGCAGAGGCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCT
CACACCAGCTGACCGCGCGGCTCCGGGCGCAGATTGCCATGTACGAGTCAGAGCTGGAGCGGGCCCATGG
GCAGATGCTGGAGGAGATGCAGTCCCTGGAAGAGGACAAGAACCGGGCCATTGAGGAGGCCTTTGCCAGA
GCCCAGGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGGCGTCCGGACCAACTTGCTGACCTTGCAGC
CGGCACTGCGGACCCTCACCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCGGCTTCCCACTGCTGCT
GCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGTCAACAGCAACAACCAG
GAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGCGGCTGA
AAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCCAC
CAATGCTGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCC
TTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGAGGTGCAGGCCCTGGTCACCTCTT
GCATTGATGGCTTCAATGTCTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAAGACGTACACGATGGA
GGGGACCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTGCAGGAGAAG
GCGTCTGACTGGGAGTACACCATCACCGTCAGCGCTGCGGAGATCTACAATGAGGTCCTCAGGGACCTGC
TAGGGAAAGAGCCTCAGGAAAAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACC
AGGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGGCCACACTAAT
CGCACGACCGAGTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCGTGACGGTGC
GAGGCGTGGACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACTTGGCTGGCTCGGA
GCGCGTGGGCAAGTCGGGGGCCGAGGGCAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCG
GCTCTGGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAACTCCAAGCTCA
CCTACCTGCTGCAGGATTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGTCCCCCGTGGA
GAAGAACACTAGCGAGACGCTCTATTCCCTCAAGTTTGCTGAGAGGGTGCGCTCTGTGGAGCTGGGGCCT
GGGCTACGCAGGGCAGAGCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTTGTCAGA
CGCCACAGCCCTCGGCACGGGCCCACTCAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCG
GAGGAAGCTGCAGCCCTCGGCCTGA

Translation (684 aa):
MVENERLRQEMRRCEAELQELRTKPAGPCPGCEHSQESAQLRDKLSQLQLEMAESKGMLSELNLEVQQKT
DRLAEVELRLKDCLAEKAQEEERLSRRLRDSHETIASLRAQSPPVKYVIKTVEVESSKTKQALSESQARN
QHLQEQVAMQRQVLKEMEQQLQSSHQLTARLRAQIAMYESELERAHGQMLEEMQSLEEDKNRAIEEAFAR
AQVEMKAVHENLAGVRTNLLTLQPALRTLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQ
ELLRKYRRELQLRKKCHNELVRLKGNIRVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVS
FELDKVFSPQASQQDEVQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEK
ASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTN
RTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLS
ALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVELGP
GLRRAELGSWSSQEHLEWEPACQTPQPSARAHSAPSSGTSSRPGSIRRKLQPSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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