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Report for CCDS82208.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82208.1 Public Homo sapiens 17 RNF157 24 110 108 CCDS HistoryNCBI Gene:114804Re-query CCDS DB by CCDS ID:82208.1Re-query CCDS DB by GeneID:114804See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82208.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319945.10 ENSP00000321837.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000319945.10Link to Ensembl Protein Viewer:ENSP00000321837.4Re-query CCDS DB by Nucleotide ID:ENST00000319945Re-query CCDS DB by Protein ID:ENSP00000321837
Original member Current member NCBI NM_001330501.2 NP_001317430.1 Accepted alive Link to Nucleotide Sequence:NM_001330501.2Link to Protein Sequence:NP_001317430.1Re-query CCDS DB by Nucleotide ID:NM_001330501Re-query CCDS DB by Protein ID:NP_001317430Link to BLAST:NP_001317430.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317430.1 657 Q96PX1-2 657 100% 0 0

Chromosomal Locations for CCDS 82208.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 76145235 76145353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76152355 76152465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76154283 76154328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76155562 76155734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76156210 76156321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76158393 76158501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76159335 76159573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76161535 76161647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76161843 76162002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76162552 76162623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76164748 76164795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76165502 76165545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76166461 76166527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76167009 76167126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76167651 76167797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76173702 76173790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76212364 76212482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76240153 76240240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1974 nt):
ATGGGGGCCCTGACGAGCCGGCAGCACGCGGGCGTGGAGGAGGTGGACATCCCGTCTAATTCCGTGTACC
GCTACCCGCCCAAGTCCGGAAGCTATTTTGCCAGCCACTTCATTATGGGAGGAGAGAAGTTTGACTCAAC
TCATCCTGAAGGTTACCTGTTTGGAGAGAACAGCGATCTGAACTTTCTGGGGAACAGACCAGTTGTGTTT
CCTTACGCCGCCCCACCTCCCCAAGAACCCGTGAAGACTCTGAGAAGCCTGGTCAATATCCGAAAGGACA
CACTGAGGCTCGTCAAATGTGCTGAGGAAGTGAAGAGCCCTGGAGAAGAGGCCAGTAAAGCTAAAGTCCA
CTACAATGTTGAGTTCACCTTTGACACAGATGCTCGGGTAGCCATCACCATCTATTACCAGGCCACGGAA
GAGTTCCAGAATGGTATTGCCAGCTACATTCCCAAAGACAACAGCCTCCAGTCGGAGACTGTGCAGTACA
AGCGAGGAGTGTGTCAGCAGTTCTGCCTGCCCTCCCACACCGTGGATCCCTCCGAGTGGGCCGAAGAGGA
GCTTGGCTTTGATTTAGACCGAGAAGTTTACCCTCTAGTGGTACATGCCGTGGTGGATGAAGGAGACGAG
TATTTTGGCCATTGCCATGTACTGCTGGGTACTTTTGAGAAGCACACAGATGGAACTTTCTGTGTCAAGC
CCCTCAAACAGAAACAAGTAGTAGACGGGGTCAGCTACCTCCTTCAGGAGATCTATGGAATTGAAAACAA
GTACAACACACAAGATTCTAAGGTGGCTGAAGACGAAGTGAGTGATAACAGTGCCGAGTGTGTGGTGTGT
CTCTCGGATGTCCGGGACACCTTGATTCTGCCCTGTCGCCACCTCTGCCTCTGTAACACCTGTGCAGACA
CGCTGCGCTACCAGGCCAACAACTGCCCCATCTGCCGACTGCCCTTCCGGGCACTGCTTCAGATCCGAGC
CATGAGGAAAAAATTGGGCCCCTTGTCCCCAACCAGCTTTAACCCCATCATCTCATCCCAGACATCTGAC
TCTGAAGAGCATCCATCCTCAGAGAATATTCCACCAGGCTATGAAGTAGTATCTCTTCTGGAGGCCCTCA
ACGGGCCCCTCACCCCGTCCCCAGCAGTTCCTCCACTTCACGTGCTTGGAGATGGCCACCTCTCAGGAAT
GCTCCCTTCATATGGCAGTGATGGCCACCTGCCCCCCGTCAGGACGATCTCGCCTCTTGACCGCCTGTCT
GACAGCAGCAGTCAGGGACTCAAACTCAAAAAGAGTCTCTCCAAATCCACTTCCCAAAACTCTTCCGTGC
TGCATGAAGAGGAAGATGAGCATTCCTGCAGCGAGTCGGAGACACAGCTCTCTCAGAGACCGTCGGTTCA
GCATCTCGGAGAGGAATGTGGTGTGACTCCAGAAAGTGAGAATCTCACCTTGTCGTCATCTGGAGCTATT
GACCAGTCGTCTTGCACAGGGACGCCTCTGTCATCCACTATTTCCTCCCCAGAAGGCCCTGCCAGCAGCA
GCTTGGCCCAGTCTGTCATGTCCATGGCATCCTCCCAGATCAGCACTGACACCGTCTCCTCCATGTCTGG
CTCCTACATCGCCCCTGGCACTGAAGAGGAGGGAGAGGCTCTCTCTTCCCCCCAGCCTGCCAGCAGGGCC
CCCTCAGAAGAAGGAGAGGGAAATGATGTTATAGAGGAAGAGGATGGATCACCCACGCAGGAAGGCCAGA
GGACGTGCGCATTTCTAGGTATGGAGTGTGACAATAACAATGACTTTGACATCGCAAGCGTGAAAGCACT
GGACAATAAGCTGTGCTCTGAGGTCTGCTTACCTGGTGCCTGGCAGGCTGATGACAATGCCGTCAGTCGG
AATGCCCAGCGCCGGCGCTTGTCATCCAGCAGCCTGGAGGACTCTGAGACGAGGCCCTGTGTGTGGGGCC
CTTTGGCTGTCTGA

Translation (657 aa):
MGALTSRQHAGVEEVDIPSNSVYRYPPKSGSYFASHFIMGGEKFDSTHPEGYLFGENSDLNFLGNRPVVF
PYAAPPPQEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNVEFTFDTDARVAITIYYQATE
EFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHTVDPSEWAEEELGFDLDREVYPLVVHAVVDEGDE
YFGHCHVLLGTFEKHTDGTFCVKPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVC
LSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICRLPFRALLQIRAMRKKLGPLSPTSFNPIISSQTSD
SEEHPSSENIPPGYEVVSLLEALNGPLTPSPAVPPLHVLGDGHLSGMLPSYGSDGHLPPVRTISPLDRLS
DSSSQGLKLKKSLSKSTSQNSSVLHEEEDEHSCSESETQLSQRPSVQHLGEECGVTPESENLTLSSSGAI
DQSSCTGTPLSSTISSPEGPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGEALSSPQPASRA
PSEEGEGNDVIEEEDGSPTQEGQRTCAFLGMECDNNNDFDIASVKALDNKLCSEVCLPGAWQADDNAVSR
NAQRRRLSSSSLEDSETRPCVWGPLAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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