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Report for CCDS82387.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82387.1 Public Homo sapiens 19 ZNF615 24 110 108 CCDS HistoryNCBI Gene:284370Re-query CCDS DB by CCDS ID:82387.1Re-query CCDS DB by GeneID:284370See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82387.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391795.7 ENSP00000375672.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391795.7Link to Ensembl Protein Viewer:ENSP00000375672.3Re-query CCDS DB by Nucleotide ID:ENST00000391795Re-query CCDS DB by Protein ID:ENSP00000375672
Original member Current member NCBI NM_001321317.2 NP_001308246.1 Accepted alive Link to Nucleotide Sequence:NM_001321317.2Link to Protein Sequence:NP_001308246.1Re-query CCDS DB by Nucleotide ID:NM_001321317Re-query CCDS DB by Protein ID:NP_001308246Link to BLAST:NP_001308246.1

Chromosomal Locations for CCDS 82387.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 51992880 51994837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52001813 52001908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52002155 52002281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52008141 52008170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2211 nt):
ATGAGGCCGGAGCCCACCAAGTTCTGGGAAGAATCCCTAACACTGGAGGATGTGGCTGTGGACTTCACCT
GGGAGGAGTGGCAGTTCCTGAGCCCTGCTCAGAAGGACCTGTACCGGGACGTGATGTTGGAGAACTACAG
CAACCTGGTGGCAGTGGGGTATCAAGCCAGCAAACCAGATGCACTCTCCAAATTGGAACGAGGAGAAGAA
ACTTGCACAACAGAAGATGAAATCTACTCTCGAATCTGTTCTGAAATCAGGAAAATTGATGATCCTCTGC
AGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAACAGAATATGTTTGGAAA
TATTGTTAATCAGAACAAAGGTCATTTCCTGCTGAAGCAAGATTGTGATACGTTTGACTTACATGAAAAA
CCTTTAAAATCAAATTTAAGTTTTGAAAACCAGAAAAGGAGCTCTGGCCTAAAGAACTCTGCTGAGTTTA
ATAGAGATGGGAAATCCCTTTTTCATGCTAACCATAAACAATTTTATACTGAAATGAAGTTTCCTGCAAT
TGCAAAACCTATTAATAAGTCCCAGTTCATTAAGCAACAGAGAACTCACAACATAGAGAATGCCCATGTA
TGCAGTGAATGTGGGAAAGCCTTCCTCAAGTTGTCTCAGTTTATTGATCATCAGAGAGTTCACACTGGAG
AAAAACCTCATGTATGCAGTATGTGTGGGAAAGCTTTCTCCAGAAAATCCAGACTAATGGACCATCAGAG
AACTCATACAGAACTGAAACATTATGAATGCACTGAATGTGACAAAACCTTCCTCAAGAAATCACAGCTC
AATATACATCAGAAAACTCATATGGGAGGGAAACCTTACACATGTAGCCAATGTGGGAAAGCCTTCATCA
AGAAGTGTCGGCTCATTTATCATCAACGAACTCATACAGGAGAGAAACCCCATGGATGCAGTGTATGTGG
GAAGGCCTTCTCTACAAAGTTCAGTCTCACTACACATCAGAAAACTCATACAGGAGAAAAACCTTATATA
TGTAGTGAATGTGGAAAAGGCTTCATTGAGAAGAGGCGTCTTACTGCACATCATCGAACTCATACTGGTG
AGAAACCCTTTATATGCAATAAATGTGGGAAAGGCTTCACCTTGAAGAACAGTCTTATCACACATCAGCA
AACTCATACAGGAGAGAAATTATATACATGTAGTGAATGTGGAAAAGGCTTTTCAATGAAGCACTGTCTC
ATGGTACATCAACGAACTCATACTGGAGAGAAACCTTATAAATGCAATGAGTGTGGAAAGGGCTTCGCTT
TGAAGAGCCCACTCATCAGACATCAGCGAACACATACTGGAGAGAAACCCTATGTATGCACCGAATGTCG
AAAAGGTTTCACCATGAAGAGTGACCTCATTGTACATCAGCGAACTCATACTGCAGAGAAGCCATATATA
TGCAATGATTGTGGAAAAGGCTTCACTGTGAAGAGCCGCCTTATTGTGCATCAGCGAACTCATACTGGAG
AAAAACCCTATGTATGTGGTGAGTGTGGAAAAGGCTTTCCAGCAAAGATCCGGCTAATGGGACATCAACG
AACTCATACAGGAGAGAAACCTTATATTTGCAATGAGTGTGGAAAAGGCTTCACTGAGAAGAGTCATCTC
AATGTACATCGGCGCACTCATACAGGAGAGAAACCCTATGTATGCAGTGAATGTGGCAAAGGCTTAACTG
GGAAAAGCATGCTCATTGCACATCAGCGAACTCATACTGGGGAGAAACCTTATATATGCAATGAATGTGG
AAAGGGCTTCACCATGAAGAGTACTCTCAGTATACATCAGCAAACTCATACTGGAGAGAAGCCATACAAA
TGCAATGAATGTGATAAAACCTTCAGGAAGAAGACATGCCTCATACAACATCAGCGATTTCACACAGGAA
AGACTTCCTTTGCATGTACTGAATGTGGAAAATTCTCTTTGCGCAAAAATGATCTTATTACACATCAGAG
AATTCACACAGGAGAGAAACCGTACAAATGCAGTGACTGCGGGAAAGCCTTCACTACAAAATCAGGGCTC
AATGTTCATCAAAGAAAACATACAGGAGAGAGGCCCTATGGATGTAGTGATTGTGGGAAAGCTTTTGCGC
ACTTGTCTATCCTTGTTAAACACAGGAGAATTCACAGGTAG

Translation (736 aa):
MRPEPTKFWEESLTLEDVAVDFTWEEWQFLSPAQKDLYRDVMLENYSNLVAVGYQASKPDALSKLERGEE
TCTTEDEIYSRICSEIRKIDDPLQHHLQNQSIQKSVKQCHEQNMFGNIVNQNKGHFLLKQDCDTFDLHEK
PLKSNLSFENQKRSSGLKNSAEFNRDGKSLFHANHKQFYTEMKFPAIAKPINKSQFIKQQRTHNIENAHV
CSECGKAFLKLSQFIDHQRVHTGEKPHVCSMCGKAFSRKSRLMDHQRTHTELKHYECTECDKTFLKKSQL
NIHQKTHMGGKPYTCSQCGKAFIKKCRLIYHQRTHTGEKPHGCSVCGKAFSTKFSLTTHQKTHTGEKPYI
CSECGKGFIEKRRLTAHHRTHTGEKPFICNKCGKGFTLKNSLITHQQTHTGEKLYTCSECGKGFSMKHCL
MVHQRTHTGEKPYKCNECGKGFALKSPLIRHQRTHTGEKPYVCTECRKGFTMKSDLIVHQRTHTAEKPYI
CNDCGKGFTVKSRLIVHQRTHTGEKPYVCGECGKGFPAKIRLMGHQRTHTGEKPYICNECGKGFTEKSHL
NVHRRTHTGEKPYVCSECGKGLTGKSMLIAHQRTHTGEKPYICNECGKGFTMKSTLSIHQQTHTGEKPYK
CNECDKTFRKKTCLIQHQRFHTGKTSFACTECGKFSLRKNDLITHQRIHTGEKPYKCSDCGKAFTTKSGL
NVHQRKHTGERPYGCSDCGKAFAHLSILVKHRRIHR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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