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Report for CCDS82463.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82463.1 Public Homo sapiens 2 SNRPG 24 110 108 CCDS HistoryNCBI Gene:6637Re-query CCDS DB by CCDS ID:82463.1Re-query CCDS DB by GeneID:6637See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82463.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000454893.1 ENSP00000393388.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000454893.1Link to Ensembl Protein Viewer:ENSP00000393388.1Re-query CCDS DB by Nucleotide ID:ENST00000454893Re-query CCDS DB by Protein ID:ENSP00000393388
Original member Current member NCBI NM_001317165.2 NP_001304094.1 Accepted alive Link to Nucleotide Sequence:NM_001317165.2Link to Protein Sequence:NP_001304094.1Re-query CCDS DB by Nucleotide ID:NM_001317165Re-query CCDS DB by Protein ID:NP_001304094Link to BLAST:NP_001304094.1

Chromosomal Locations for CCDS 82463.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 70281681 70281684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70287265 70287371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70288068 70288192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70289350 70289372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70293618 70293649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (291 nt):
ATGAGCAAAGCTCACCCTCCCGAGTTGAAAAAATTTATGGACAAGAAGTTATCATTGAAATTAAATGGTG
GCAGACATGTCCAAGGAATATTGCGGGGATTTGATCCCTTTATGAACCTTGTGATAGATGAATGTGTGGA
GATGGCGACTAGTGGACAACAGAACAATATTGGAATGGTGGACAACATACCTAATAAAGCGGTAAGCCCA
AAGTTCTTGAAAAAGGTGAACCAAAAAGGACAACTTACTTTTAGCAAATTATTAAGCATAAAGACCTCCA
AGGAGTGGTAA

Translation (96 aa):
MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVDNIPNKAVSP
KFLKKVNQKGQLTFSKLLSIKTSKEW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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