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Report for CCDS82974.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82974.1 Public Homo sapiens 4 KLHL2 24 110 108 CCDS HistoryNCBI Gene:11275Re-query CCDS DB by CCDS ID:82974.1Re-query CCDS DB by GeneID:11275See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82974.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000421009.6 ENSP00000408974.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000421009.6Link to Ensembl Protein Viewer:ENSP00000408974.2Re-query CCDS DB by Nucleotide ID:ENST00000421009Re-query CCDS DB by Protein ID:ENSP00000408974
Original member Current member NCBI NM_001331024.2 NP_001317953.1 Accepted alive Link to Nucleotide Sequence:NM_001331024.2Link to Protein Sequence:NP_001317953.1Re-query CCDS DB by Nucleotide ID:NM_001331024Re-query CCDS DB by Protein ID:NP_001317953Link to BLAST:NP_001317953.1

Chromosomal Locations for CCDS 82974.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 165228824 165228913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 165263197 165263359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 165294359 165294468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 165297609 165297725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 165299507 165299656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 165305608 165305725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 165310553 165310750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 165311464 165311565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 165313238 165313366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 165314026 165314166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 165317826 165317969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 165322032 165322060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGTCACAATTGTGGCAGAAGACATGGAAATTTCTGCTCATAGAGTGGTGCTGGCCGCCTGTAGTCCTTA
TTTTCATGCCATGTTTACAGGTACTTCTCCCAGCAGCTGGTCTCTTACAGTTACAGGATGTGAAGAAGAC
TTGTTGTGAATTTTTGGAATCCCAGCTTCACCCTGTCAACTGCTTAGGAATCCGGGCTTTTGCTGATATG
CATGCATGTACCGACCTTCTGAACAAGGCCAACACCTATGCAGAGCAACATTTTGCAGATGTTGTACTTA
GTGAAGAATTTCTCAATCTTGGCATCGAACAAGTGTGCAGCTTAATCTCAAGTGACAAACTTACCATTTC
TTCAGAAGAGAAGGTATTTGAAGCAGTAATAGCATGGGTGAACCATGACAAGGATGTGAGGCAAGAGTTT
ATGGCCCGACTGATGGAACATGTACGGTTACCTTTGCTTCCTCGGGAATATTTAGTTCAGAGGGTTGAAG
AGGAAGCATTGGTCAAGAATAGCAGTGCTTGCAAAGATTACCTCATTGAAGCAATGAAGTACCATTTGCT
GCCAACAGAGCAGCGTATATTAATGAAGAGTGTCCGGACCCGGCTGAGGACACCCATGAACCTTCCCAAA
TTGATGGTGGTGGTTGGGGGCCAAGCACCAAAGGCTATCCGGAGTGTGGAATGCTATGACTTTAAAGAAG
AAAGGTGGCACCAAGTAGCAGAGTTGCCTTCCAGGAGGTGCAGGGCAGGCATGGTCTACATGGCTGGACT
TGTTTTTGCTGTTGGTGGCTTTAATGGCTCATTAAGAGTTCGCACTGTAGATTCCTACGACCCTGTGAAG
GACCAGTGGACCAGCGTTGCTAACATGAGAGACCGGAGAAGCACTTTGGGAGCTGCTGTGTTAAATGGAT
TATTATACGCTGTGGGAGGCTTTGATGGGAGTACAGGTTTGTCATCTGTGGAAGCATACAACATAAAGTC
TAATGAGTGGTTTCATGTAGCTCCCATGAATACAAGGAGGAGCAGTGTTGGTGTGGGTGTTGTTGGAGGT
TTGCTCTATGCTGTAGGAGGTTATGATGGAGCATCACGTCAGTGTCTTAGCACAGTAGAATGCTATAATG
CTACAACAAATGAGTGGACCTATATAGCAGAAATGAGCACCAGGCGGAGTGGAGCAGGTGTTGGTGTGTT
AAACAATTTATTGTATGCTGTAGGAGGTCATGATGGCCCTTTAGTACGAAAAAGTGTTGAAGTATATGAT
CCCACCACTAACGCATGGAGACAGGTTGCAGATATGAACATGTGCAGAAGAAATGCAGGAGTTTGTGCAG
TTAATGGTCTGTTATATGTTGTTGGAGGGGATGATGGTTCCTGTAACTTGGCGTCAGTAGAATATTATAA
CCCAACAACCGATAAATGGACAGTTGTGTCATCGTGTATGAGCACAGGGAGAAGTTATGCAGGGGTCACA
GTTATTGATAAACCATTATGA

Translation (496 aa):
MSQLWQKTWKFLLIEWCWPPVVLIFMPCLQVLLPAAGLLQLQDVKKTCCEFLESQLHPVNCLGIRAFADM
HACTDLLNKANTYAEQHFADVVLSEEFLNLGIEQVCSLISSDKLTISSEEKVFEAVIAWVNHDKDVRQEF
MARLMEHVRLPLLPREYLVQRVEEEALVKNSSACKDYLIEAMKYHLLPTEQRILMKSVRTRLRTPMNLPK
LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVK
DQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGG
LLYAVGGYDGASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYD
PTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVT
VIDKPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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