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Report for CCDS83325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83325.1 Public Homo sapiens 8 WASHC5 24 110 108 CCDS HistoryNCBI Gene:9897Re-query CCDS DB by CCDS ID:83325.1Re-query CCDS DB by GeneID:9897See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83325.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000517845.5 ENSP00000429676.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000517845.5Link to Ensembl Protein Viewer:ENSP00000429676.1Re-query CCDS DB by Nucleotide ID:ENST00000517845Re-query CCDS DB by Protein ID:ENSP00000429676
Original member Current member NCBI NM_001330609.2 NP_001317538.1 Accepted alive Link to Nucleotide Sequence:NM_001330609.2Link to Protein Sequence:NP_001317538.1Re-query CCDS DB by Nucleotide ID:NM_001330609Re-query CCDS DB by Protein ID:NP_001317538Link to BLAST:NP_001317538.1

Chromosomal Locations for CCDS 83325.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 125024617 125024673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125028620 125028707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125032241 125032394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125037237 125037333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125038830 125038959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125039795 125039898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125043825 125043904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125043992 125044094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125044536 125044698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125047207 125047331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125049006 125049185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125050564 125050665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125055591 125055671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125056677 125056817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125057556 125057666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125059222 125059297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125059376 125059542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125061082 125061194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125063522 125063651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125067592 125067719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125073153 125073324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125074998 125075111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125076348 125076500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125078738 125078930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 125081661 125081734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3036 nt):
ATGCTACTGGTCATTGACCAAAAGATTGAAGGAGAAGTCAGAGAGAGGATGCTGGTTTCTTACTACCGAT
ACAGTGCTGCTCGATCTTCTGCTGATTCAAATATGGACGATATTTGTAAGCTGCTTCGAAGTACAGGTTA
TTCTAGCCAACCAGGTGCCAAAAGACCATCCAACTATCCCGAGAGCTATTTCCAGAGAGTGCCTATCAAC
GAATCCTTCATCAGTATGGTCATTGGTCGACTGAGATCTGATGATATTTACAACCAGGTCTCAGCGTATC
CTTTGCCGGAGCATCGCAGCACAGCCCTGGCAAACCAAGCTGCCATGCTGTACGTGATTCTCTACTTTGA
GCCTTCCATCCTTCACACCCATCAAGCAAAAATGAGAGAGATAGTGGATAAATACTTTCCAGATAATTGG
GTAATTAGTATTTACATGGGGATCACAGTTAATCTAGTAGATGCTTGGGAACCTTACAAAGCTGCAAAAA
CTGCTTTAAATAATACCCTGGACCTTTCAAATGTCAGAGAACAGGCAAGCAGATATGCTACTGTCAGTGA
AAGAGTGCATGCTCAAGTGCAGCAATTTCTAAAAGAAGGTTATTTAAGGGAGGAGATGGTTCTGGACAAT
ATCCCAAAGCTTCTGAACTGCCTGAGAGACTGCAATGTTGCCATCCGATGGCTGATGCTTCATACAGCAG
ACTCAGCCTGTGACCCAAACAACAAACGCCTTCGTCAAATCAAGGACCAGATTCTAACAGACTCTCGGTA
CAATCCCAGGATCCTCTTCCAGCTGCTGTTAGATACTGCACAATTTGAGTTTATACTCAAAGAGATGTTC
AAGCAAATGCTTTCAGAAAAGCAAACCAAATGGGAGCATTACAAGAAAGAGGGTTCGGAGCGGATGACTG
AGCTTGCTGATGTCTTTTCAGGAGTGAAACCCCTAACCAGAGTGGAGAAAAATGAAAACCTTCAAGCTTG
GTTCAGAGAGATCTCAAAACAAATATTGTCTTTAAATTATGATGATTCTACTGCTGCGGGCAGAAAAACT
GTACAACTGATACAAGCTTTGGAAGAGGTTCAAGAATTCCACCAGTTGGAATCCAATCTGCAAGTATGTC
AGTTTCTTGCCGATACTCGAAAGTTTCTTCATCAAATGATCAGAACCATTAACATTAAAGAGGAGGTTCT
GATCACAATGCAGATCGTTGGGGACCTTTCTTTCGCTTGGCAGTTGATTGACAGTTTCACATCCATCATG
CAAGAAAGCATAAGGGTAAATCCATCCATGGTTACTAAACTCAGAGCTACCTTCCTAAAGCTTGCCTCTG
CCCTCGATCTGCCCCTTCTTCGTATTAATCAGGCAAATAGCCCCGACCTGCTCAGCGTGTCACAGTACTA
TTCTGGAGAGTTGGTATCCTATGTGAGAAAAGTTTTGCAGATCATCCCAGAAAGCATGTTTACATCTCTT
CTAAAGATCATAAAGCTTCAGACCCACGACATTATTGAAGTGCCTACCCGCCTGGACAAAGACAAGCTGA
GGGACTATGCTCAGCTAGGCCCACGATACGAGGTTGCCAAGCTTACTCATGCTATTTCCATTTTTACTGA
AGGCATCTTAATGATGAAAACGACTTTGGTTGGCATCATCAAGGTGGATCCAAAGCAGTTGCTGGAAGAT
GGAATAAGGAAAGAGCTTGTGAAGCGCGTTGCCTTTGCCCTGCATAGGGGACTGATATTCAACCCTCGAG
CCAAGCCAAGTGAATTGATGCCCAAGCTGAAAGAGTTGGGAGCGACCATGGATGGATTCCATCGTTCTTT
TGAATACATACAGGACTATGTCAACATTTATGGTCTGAAGATTTGGCAGGAAGAAGTATCTCGTATCATA
AATTACAACGTGGAGCAAGAGTGTAATAACTTTCTAAGAACGAAGATTCAAGATTGGCAAAGCATGTACC
AGTCCACTCATATTCCAATACCCAAGTTTACCCCTGTGGATGAGTCTGTAACGTTTATTGGTCGACTCTG
CAGAGAAATCCTGCGGATCACAGACCCAAAAATGACATGTCACATAGACCAGCTGAACACTTGGTATGAT
ATGAAAACTCATCAGGAAGTGACCAGCAGCCGCCTCTTCTCAGAAATCCAGACCACCTTGGGAACCTTTG
GTCTAAATGGCTTAGACAGGCTTCTGTGCTTTATGATTGTAAAAGAGTTACAGAATTTCCTCAGTATGTT
TCAGAAAATTATCCTGAGAGACAGAACTGTTCAGGACACTTTAAAAACCCTCATGAATGCTGTCAGTCCC
CTAAAAAGTATTGTCGCAAATTCAAATAAAATTTATTTTTCCGCCATTGCCAAAACACAGAAGATTTGGA
CTGCGTATCTCGAGGCTATAATGAAGGTTGGGCAGATGCAGATTCTGAGACAACAGATTGCCAATGAATT
AAATTATTCTTGTCGGTTTGATTCTAAACATCTGGCAGCTGCTCTGGAGAATCTCAATAAGGCTCTCCTA
GCAGACATTGAAGCCCACTATCAGGACCCTTCACTTCCTTACCCCAAAGAAGATAACACACTTTTATATG
AAATCACAGCCTATCTGGAGGCAGCTGGCATTCACAACCCACTGAATAAGATATACATAACAACAAAGCG
CTTACCCTATTTTCCAATTGTAAACTTTCTATTTTTGATCGCTCAGTTGCCAAAACTTCAATACAACAAA
AATCTGGGAATGGTCTGCCGAAAACCGACCGACCCGGTTGATTGGCCACCACTTGTCCTGGGACTGCTCA
CTCTGCTGAAGCAGTTCCATTCCCGGTACACCGAGCAGTTCCTGGCGCTGATTGGCCAGTTTATCTGCTC
CACGGTGGAGCAGTGTACAAGCCAGAAGATACCTGAAATTCCTGCAGATGTTGTGGGTGCCCTTCTGTTC
CTGGAGGATTATGTTCGGTACACAAAGCTACCCAGGAGGGTTGCTGAAGCACATGTGCCTAATTTCATTT
TTGATGAGTTCAGAACAGTGCTGTAA

Translation (1011 aa):
MLLVIDQKIEGEVRERMLVSYYRYSAARSSADSNMDDICKLLRSTGYSSQPGAKRPSNYPESYFQRVPIN
ESFISMVIGRLRSDDIYNQVSAYPLPEHRSTALANQAAMLYVILYFEPSILHTHQAKMREIVDKYFPDNW
VISIYMGITVNLVDAWEPYKAAKTALNNTLDLSNVREQASRYATVSERVHAQVQQFLKEGYLREEMVLDN
IPKLLNCLRDCNVAIRWLMLHTADSACDPNNKRLRQIKDQILTDSRYNPRILFQLLLDTAQFEFILKEMF
KQMLSEKQTKWEHYKKEGSERMTELADVFSGVKPLTRVEKNENLQAWFREISKQILSLNYDDSTAAGRKT
VQLIQALEEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINIKEEVLITMQIVGDLSFAWQLIDSFTSIM
QESIRVNPSMVTKLRATFLKLASALDLPLLRINQANSPDLLSVSQYYSGELVSYVRKVLQIIPESMFTSL
LKIIKLQTHDIIEVPTRLDKDKLRDYAQLGPRYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLED
GIRKELVKRVAFALHRGLIFNPRAKPSELMPKLKELGATMDGFHRSFEYIQDYVNIYGLKIWQEEVSRII
NYNVEQECNNFLRTKIQDWQSMYQSTHIPIPKFTPVDESVTFIGRLCREILRITDPKMTCHIDQLNTWYD
MKTHQEVTSSRLFSEIQTTLGTFGLNGLDRLLCFMIVKELQNFLSMFQKIILRDRTVQDTLKTLMNAVSP
LKSIVANSNKIYFSAIAKTQKIWTAYLEAIMKVGQMQILRQQIANELNYSCRFDSKHLAAALENLNKALL
ADIEAHYQDPSLPYPKEDNTLLYEITAYLEAAGIHNPLNKIYITTKRLPYFPIVNFLFLIAQLPKLQYNK
NLGMVCRKPTDPVDWPPLVLGLLTLLKQFHSRYTEQFLALIGQFICSTVEQCTSQKIPEIPADVVGALLF
LEDYVRYTKLPRRVAEAHVPNFIFDEFRTVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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