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Report for CCDS83385.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83385.1 Public Homo sapiens 9 FAM120AOS 24 110 108 CCDS HistoryNCBI Gene:158293Re-query CCDS DB by CCDS ID:83385.1Re-query CCDS DB by GeneID:158293See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83385.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000423591.5 ENSP00000414298.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000423591.5Link to Ensembl Protein Viewer:ENSP00000414298.1Re-query CCDS DB by Nucleotide ID:ENST00000423591Re-query CCDS DB by Protein ID:ENSP00000414298
Original member Current member EBI ENST00000649557.1 ENSP00000496904.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649557.1Link to Ensembl Protein Viewer:ENSP00000496904.1Re-query CCDS DB by Nucleotide ID:ENST00000649557Re-query CCDS DB by Protein ID:ENSP00000496904
Original member Current member NCBI NM_001322224.3 NP_001309153.1 Accepted alive Link to Nucleotide Sequence:NM_001322224.3Link to Protein Sequence:NP_001309153.1Re-query CCDS DB by Nucleotide ID:NM_001322224Re-query CCDS DB by Protein ID:NP_001309153Link to BLAST:NP_001309153.1

Chromosomal Locations for CCDS 83385.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 93447611 93447697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93450479 93450599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93451088 93451104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (225 nt):
ATGCAGTTCCGCGGCAGAAACCTCTGTAGAGGAGCAGGATGCAACCGACAGGCTGTGGCCGGACAGCTGC
TGCCCAGCACATGGAGCCTGCACGCGCACGGTTTGGCCAAAGAAGCCCCCATACTCCCGGTGAAAAAGAT
TTCCAGAAGCTGTTCTGTCAATAACAAAGTCTCAAAGAAAACCACAAAACCACCAACACTAAGATCATTC
TTGAGTCCAATTTGA

Translation (74 aa):
MQFRGRNLCRGAGCNRQAVAGQLLPSTWSLHAHGLAKEAPILPVKKISRSCSVNNKVSKKTTKPPTLRSF
LSPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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