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Report for CCDS83725.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83725.1 Public Mus musculus 10 Arhgap45 23 108 98 CCDS HistoryNCBI Gene:70719Re-query CCDS DB by CCDS ID:83725.1Re-query CCDS DB by GeneID:70719See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83725.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105373.7 ENSMUSP00000101012.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105373.7Link to Ensembl Protein Viewer:ENSMUSP00000101012.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000105373Re-query CCDS DB by Protein ID:ENSMUSP00000101012
Original member Current member NCBI NM_001347074.1 NP_001334003.1 Accepted alive Link to Nucleotide Sequence:NM_001347074.1Link to Protein Sequence:NP_001334003.1Re-query CCDS DB by Nucleotide ID:NM_001347074Re-query CCDS DB by Protein ID:NP_001334003Link to BLAST:NP_001334003.1

Chromosomal Locations for CCDS 83725.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80016978 80017103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80017780 80018104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80020690 80020833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80020951 80021035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80021122 80021194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80021389 80021455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80021546 80021683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80021795 80021859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80022077 80022187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80022275 80022355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80024663 80024851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80025409 80025546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80026156 80026346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80026433 80026557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80026657 80026734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80026823 80026927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80027033 80027205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80027539 80027727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80027821 80027958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80028657 80028883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80028973 80029183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80030289 80030376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80030732 80031048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3384 nt):
ATGGGCATAGCATGCAACTACAACACCATGCTGGGTCCACGCTGGGGGAACCGGGCCAGCTATAGTCCAC
ACCAGGCAGAATGGCCGGCGACAAGGAGTGGCCTGAACCTAGGAGGCCGCATTACGGAGCTGCCCAGGAA
GGATTGGACAGAAGCTCCCGGCCTGGAGCCACCAGCCACATCCCTGTCCACGGTAGCCAAGGGCACAGGG
ACACTCAAAAGACCCACCAGCCTGAGCCGCCATGCCAGTGCAGCAGGCTTCCCGCTCTCGGGCACTGCCA
CCTGGACCCTGGGCCGTGGGTACCGAAGCCCCCTTTCTGCGGCCAGTCCGGCAGAGTTACCCACTGAGGG
AGCTTTCCCTGATGGCGTAGAAGACATCTCAACCCTGCTGGCGGATGTGGCCCGCTTTGCTGAGGGCTTG
GAGAAGCTCAAGGAGTGTGTGCTGCAGGACGACCTTCTCGAGGCCCGCCGGCCACTGGCCCATGAGTGCC
TGGGTGAAGCTCTGCGAGTCATGCGCCAGGTCATCTCCAGATACCCACTCCTCAACACCGTGGAGACACT
CACAGCCGCTGGTACACTCATTGCCAAGGTCAAAGCCTTTCATTATGAATGCAACAATGAATCAGATAAG
AGGGAATTTGAGAAGGCTCTGGAAACCATTGCGGTGTCCTTCAGCTGCACTGTGTCCGAGTTCCTTTTGG
GTGAAGTGGACAGCAGTACTCTCCTGGCGGTGCCTCCGGGGGACCCCAGCCAGTCCATGGAGAACCTTTA
TGGGGCTGGCACGGAGGGGCCCCCACATAACGTGGAGGAATGTGAAGAAGGTTGCCTGCCCCCCGAAGAG
GTGGACATGCTTCTGCAGCGATGCGAAGGGGGTGTGGACGCTGCACTGCAGTATGCAAAAGACATGGCCA
GGTACATGAAGGACCTCATCAGCTACCTGGAGAAGAGGACCACCCTGGAGATGGAATTCGCCAAAGGTCT
CCAGAAGGTTGTCCACAACTGCAGACAGAGCGTCACACACGAGCCCCACATGCCTCTCTTGTCCATCTAC
TCACTGGCCCTGGAACAAGATTTGGAGTTTGGCCACGGCATGGTGCAGGCAGCGGGCACACTGCAGACCC
AGACCTTCATGCAGCCCCTGACGCTGCGGCGGTTGGAGCATGAGAGGCGCAGGAAGGAGATCAAAGAATC
TTGGCATCGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAACCTGCGCAAGGCCAAACAGGGCTACAAA
CAACGCTGTGAAGACCACGACAAGGCCCGGCTCCAGGTGGCCAAGGCTGAGGAGGAACAACAGGGCACAG
GCCCAGGCGCAGGGACTGCGGCCTCTAAGGCCCTGGACAAGAGGCGCAGACTGGAGGAAGAGGCCAAAAA
CAAGGCCGAGGAGGCCATGGCCACTTACCGCACATGCGTGGCAGACGCAAAGACACAGAAGCAGGAGCTG
GAGGACACAAAGGTGACTGCGCTGCGGCAGATTCAGGAGGTCATCAGGCAGAGTGATCAGACCATTAAGT
CGGCCACCATCTCCTACTACCAGCTGATGCACATGCAGACAGCACCGCTGCCCGTGAACTTCCAGATGCT
GTGCGAGAGCAGCAAACTATATGACCCGGGCCAACAGTACGCATCTCACGTGCGTCAGCTGCAGAGAGGC
GAGGAGCCGGACGTGCGCTACGACTTTGAGCCTTATGTCTCTAACAACTCCTGGTCCCCAATCATGCGTA
CACGGAAGGGCAGCTTCAACCCTGGTGATGCTTCAGGACCCGAAGCTGCTGGTAGTCCCCCCGAGGAAGG
TGGCACCTCTGAGGCAGCACCCAACAAGGACCACAGGGGGGGACGAGGTCACCAGGTTCATAAGTCCTGG
CCCATCTCCATCTCAGACACCGAAGTTGGTCTGGACACCAGCTCAGGGGACTTGAAGAAGTTCGATCGAA
CATCTTCCAGTGGGACGATGTCATCCAGTGAGGAGCTGGGGGATCAGGAAGCTGGCTTGGTAGCTTCCGC
CTTTGATTCAGCTGACCTCAATGGCATGGACCCCGAGTTACCTGTGGCCATGCCCAGTGGACCCTTCCGC
CATGTGGGATTGTCCAAGGCAGCCCGCACACACCGACTTCGCAAACTGCGCACGCCAGCCAAGTGCAGAG
AGTGTAACAGCTATGTGTACTTCCAAGGAGCTGAATGTGAAGAGTGCTGTCTGGCTTGTCACAAAAAGTG
TTTGGAGACCCTGGCCATCCAGTGTGGCCACAAGAAGCTTCAGGGCCGCCTGCAGCTCTTTGGACAAGAC
TTCAGCCAGGCAGCCCTCAGCACCCCTGATGGGGTGCCCTTCATTGTCAAAAAATGTGTCTGTGAGATTG
AGCGGCGGGCACTGCACACCAAGGGGATCTACCGGGTCAATGGCGTGAAAACGCGTGTGGAGAAGCTGTG
CCAGGCTTTTGAGAATGGCAAAGAGTTGGTGGAGTTGTCACAGGCCTCACCCCACGACATCAGCAACGTC
CTAAAGCTATACCTGCGGCAGCTACCGGAGCCCCTTATCTCTTTTCGCTTCTACCATGAGCTGGTGGGAC
TAGCTAAGGACAGCCTAAAGGCCGAAGCCGAAGCTAAGGCAGCGAGCCGGGGTCGGCAGGGTGGGTCCGA
GAGTGAGGCTGCAACCTTGGCTATGGTGGGCCGCCTGCGTGAGCTCATGCAGGATCTGCCAGCCGAAAAC
CGGGCCACACTCTTATACCTGCTGAAGCACTTGCGAAGGATCGTGGAAATGGAGCAGGATAACAAGATGA
CCCCTGGGAACCTGGGCATCGTTTTCGGGCCCACACTGTTGCGGCCTCGACCCACTGACGCCACCGTGTC
CCTCTCTTCTCTGGTGGATTATCCCCACCAGGCCCGAGTTATTGAGACTCTGATTGTCCACTACGGCCTG
GTCTTTGAGGAGGAGCCAGAGGAGGCGCCTGGCAGCCAGGAGGGGGCATCCACCCAGTGTGGCCAGCTGG
AGTCTGCTGAGGGCATTGTCTTCCCCCTGCAGGAGGAGGCAGAGGACGGAAGCCGAGAATCTCACGCGGC
ATCTAATGACTCGGACTCTGAGCTGGAAGACGCTTCTGACCCCCTTTCATCCTCGGACGCCAGTGCTCTA
CACCGCCTCAGTTTCCTGGAGCAGACCGAGGCAGGCCTGGAGGAAGGTCCCCAGAGCCATAGTGGCAGTG
AGGAACAGCTGGAGGGTGAGGATGGAGCCCCGGGTCCGTGGCTGTGTCACTTCAACACCAACCAGTCCAA
CAACACATCACGGGCCCCTCTGCCCACCATGCGGCTCCGAGGAGGGCAGATCACAGGTGGCACCAGTCAG
GAGCGGCAGCCACAGTTCGTCTGA

Translation (1127 aa):
MGIACNYNTMLGPRWGNRASYSPHQAEWPATRSGLNLGGRITELPRKDWTEAPGLEPPATSLSTVAKGTG
TLKRPTSLSRHASAAGFPLSGTATWTLGRGYRSPLSAASPAELPTEGAFPDGVEDISTLLADVARFAEGL
EKLKECVLQDDLLEARRPLAHECLGEALRVMRQVISRYPLLNTVETLTAAGTLIAKVKAFHYECNNESDK
REFEKALETIAVSFSCTVSEFLLGEVDSSTLLAVPPGDPSQSMENLYGAGTEGPPHNVEECEEGCLPPEE
VDMLLQRCEGGVDAALQYAKDMARYMKDLISYLEKRTTLEMEFAKGLQKVVHNCRQSVTHEPHMPLLSIY
SLALEQDLEFGHGMVQAAGTLQTQTFMQPLTLRRLEHERRRKEIKESWHRAQRKLQEAEANLRKAKQGYK
QRCEDHDKARLQVAKAEEEQQGTGPGAGTAASKALDKRRRLEEEAKNKAEEAMATYRTCVADAKTQKQEL
EDTKVTALRQIQEVIRQSDQTIKSATISYYQLMHMQTAPLPVNFQMLCESSKLYDPGQQYASHVRQLQRG
EEPDVRYDFEPYVSNNSWSPIMRTRKGSFNPGDASGPEAAGSPPEEGGTSEAAPNKDHRGGRGHQVHKSW
PISISDTEVGLDTSSGDLKKFDRTSSSGTMSSSEELGDQEAGLVASAFDSADLNGMDPELPVAMPSGPFR
HVGLSKAARTHRLRKLRTPAKCRECNSYVYFQGAECEECCLACHKKCLETLAIQCGHKKLQGRLQLFGQD
FSQAALSTPDGVPFIVKKCVCEIERRALHTKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHDISNV
LKLYLRQLPEPLISFRFYHELVGLAKDSLKAEAEAKAASRGRQGGSESEAATLAMVGRLRELMQDLPAEN
RATLLYLLKHLRRIVEMEQDNKMTPGNLGIVFGPTLLRPRPTDATVSLSSLVDYPHQARVIETLIVHYGL
VFEEEPEEAPGSQEGASTQCGQLESAEGIVFPLQEEAEDGSRESHAASNDSDSELEDASDPLSSSDASAL
HRLSFLEQTEAGLEEGPQSHSGSEEQLEGEDGAPGPWLCHFNTNQSNNTSRAPLPTMRLRGGQITGGTSQ
ERQPQFV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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