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Report for CCDS83755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83755.1 Public Mus musculus 10 Glipr1l2 23 108 98 CCDS HistoryNCBI Gene:67537Re-query CCDS DB by CCDS ID:83755.1Re-query CCDS DB by GeneID:67537See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83755.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000148897.7 ENSMUSP00000122771.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000148897.7Link to Ensembl Protein Viewer:ENSMUSP00000122771.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000148897Re-query CCDS DB by Protein ID:ENSMUSP00000122771
Original member Current member NCBI NM_001347157.1 NP_001334086.1 Accepted alive Link to Nucleotide Sequence:NM_001347157.1Link to Protein Sequence:NP_001334086.1Re-query CCDS DB by Nucleotide ID:NM_001347157Re-query CCDS DB by Protein ID:NP_001334086Link to BLAST:NP_001334086.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334086.1 226 Q9CQ35-2 226 100% 0 0

Chromosomal Locations for CCDS 83755.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 112083376 112083600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112092427 112092678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112096542 112096645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112097906 112098005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGAAGGCCTCTCTGCCTTGGTCTGTAGTATGGCGTGCCCAGTCGAATTACGTACGGCTAAGAAGAGTAC
TGAAGCTGTGTGAACTGTGGCTTCTATTGGTGGGCTCAGGTTTGAACGCCAAACTTCCGCTTGAAGAGGA
TGTAGACTTTATCAATGAATATGTGGGTCTCCATAATGAGCTTCGAGGCACGGTCTTCCCCCCAGGGGTG
AACCTGCGCTTCATGACTTGGGATGTAGCTTTATCGCGTACTGCCAGAGCATGGGGGAAAAAATGTATGT
ATAGCCGTAATACTCATCTAGACAAACTCCATGAATCCCATCCAGTATTTACTGAAATTGGCGAAAACAT
GTGGGTTGGTCCTGTAGAGGACTTTACTGTAACCACTGCCATCAGAAGTTGGCATGAGGAGAGGAAGAGC
TACAGTTACTTAAATGACACTTGTGTTGAGGACCAGAACTGTTCTCATTACATTCAGCTTGTGTGGGACA
GTTCCTACAAAGTTGGTTGTGCTGTTACTTCGTGTGCAAGGGCTGGAGGTTTCACACACGCAGCACTTTT
CATATGCAATTATGCACCAGGAGGAACCCTGACAAGGAGGCCTTATCAAGCAGGGCAATTTTGTTCTCGG
TGTGGCCCTGGAGACCAATGCACAGACTACCTATGCAGTAAGACGAAATAA

Translation (226 aa):
MKASLPWSVVWRAQSNYVRLRRVLKLCELWLLLVGSGLNAKLPLEEDVDFINEYVGLHNELRGTVFPPGV
NLRFMTWDVALSRTARAWGKKCMYSRNTHLDKLHESHPVFTEIGENMWVGPVEDFTVTTAIRSWHEERKS
YSYLNDTCVEDQNCSHYIQLVWDSSYKVGCAVTSCARAGGFTHAALFICNYAPGGTLTRRPYQAGQFCSR
CGPGDQCTDYLCSKTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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