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Report for CCDS84359.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84359.1 Public Mus musculus 18 Tmem241 23 108 98 CCDS HistoryNCBI Gene:338363Re-query CCDS DB by CCDS ID:84359.1Re-query CCDS DB by GeneID:338363See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84359.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055447.13 ENSMUSP00000052001.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055447.13Link to Ensembl Protein Viewer:ENSMUSP00000052001.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000055447Re-query CCDS DB by Protein ID:ENSMUSP00000052001
Original member Current member NCBI NM_178801.5 NP_848916.2 Accepted alive Link to Nucleotide Sequence:NM_178801.5Link to Protein Sequence:NP_848916.2Re-query CCDS DB by Nucleotide ID:NM_178801Re-query CCDS DB by Protein ID:NP_848916Link to BLAST:NP_848916.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848916.2 282 Q3UME2-2 282 100% 0 0

Chromosomal Locations for CCDS 84359.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 11983624 11983642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 11993564 11993628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12043214 12043307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12047565 12047634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12058926 12058960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12064204 12064239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12067060 12067105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12068298 12068346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12070080 12070131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12074618 12074643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12083992 12084069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12104099 12104180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12113395 12113472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12118404 12118450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 12121381 12121452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (849 nt):
ATGAACGTGAGGCGGTCCCTGCTCGGCCTCACCTTCTGCACCTGTTACCTGGCTTCTCACCTCACCAACA
AGTATGTCCTGTCTGTCCTGAAATTTACCTACCCTACATTATTCCAAGGGTGGCAGACATTCATTGGTGG
ACTTTTGCTTCATATGTCATGGAAACTAGGATGGGTGGAGCTCCACAGCAGTCCAAGATCTGATGTTTTG
ATATGGCTTCCTGCTTCAGCGCTGTTTGTGGGCATAATCTATGCGGGGTCCAAAGCTTTGTCTAGACTGG
CTGTTCCTGTGTTTTTCATTTTGCATAATGTAGCTGAAGTTCTCACCTGTGGGTACCAGAAGTGTGTCTG
GAAAGAGAAAACATCGCTCTCAAAGATCTGTAGTGCCCTCTTCCTCTTGGCTGCTGCAGGGTGCCTTCCC
TTCCAAGACTCTCAGTTTGATCCAGATGGATATTTTTGGGCTCTTATCCACATCTTTTGTGTAGGTTCTT
ACAAAATACTTCGGAAGTCCCGGAAGCCCACTGTGCTAAGTGACATTGACCAGCAGTACTTAAACTATAT
ATTCAGCATGGTACTCCTGGCATTTGCATCTCATCCGACAGGTGACCTCTTCGGTGCCCTGGACTTTCCA
TTCTTGTATTTCTACAGGTTCCATGGCAGCTGCTGTGCCAGTGGAGTTTTGGGATTCTTCCTCATGCTCA
GTACAGTCAGGCTGAGAAGCATCCTGGCCCCAGGGCAGTGCGCAGCCTGGATCCTCTGTGCTAAGGTCGT
CACAGCTGGCTTGTCGATGTTGCTGTTTGATATGGCCCTGACCAAAGCAACTGTGGGATGGTGCCAGCCT
GCAGGGTGA

Translation (282 aa):
MNVRRSLLGLTFCTCYLASHLTNKYVLSVLKFTYPTLFQGWQTFIGGLLLHMSWKLGWVELHSSPRSDVL
IWLPASALFVGIIYAGSKALSRLAVPVFFILHNVAEVLTCGYQKCVWKEKTSLSKICSALFLLAAAGCLP
FQDSQFDPDGYFWALIHIFCVGSYKILRKSRKPTVLSDIDQQYLNYIFSMVLLAFASHPTGDLFGALDFP
FLYFYRFHGSCCASGVLGFFLMLSTVRLRSILAPGQCAAWILCAKVVTAGLSMLLFDMALTKATVGWCQP
AG


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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