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Report for CCDS84719.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
84719.1 |
Public |
Mus musculus |
4 |
Phf24 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:230085](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:84719.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:230085](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 4 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 84719.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000107975.7 |
ENSMUSP00000103609.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000107975.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000103609.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000107975](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000103609](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001346526.1 |
NP_001333455.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001346526.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001333455.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001346526](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001333455](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001333455.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001355693.1 |
NP_001342622.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001355693.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001342622.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001355693](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001342622](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001342622.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001355694.1 |
NP_001342623.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001355694.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001342623.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001355694](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001342623](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001342623.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 84719.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1203 nt): ATGGGGGTGTTGATGTCCAAGCGGCAGACAGTAGAGCAGGTGCAGAAGGTGAGCCTGGCTGTGTCAGCCT TCAAGGATGGGCTACGGGACAGGCCTTCCATTAGACGTGGGGGTGAGCTGCCAGGGTCCCGCCGTGGCAC TGTGGAGGGCTCTGTTCAGGAAGTACAGGAGGAGAAGGAAGCAGAGGCGAGCGCCCCCGTGGTCCAGGAA GAGAGCAGTATCAACCGCGCAGCCTGGGAGCGGCTCCGAGATGGGCGTGGCGTCGAGCCTGAGGAGTTTG ACAGGACCAGCCGATTCACGCCTCCTGCCTTCATCCGGCCCACGCGGAAGCTGGACGATGACAAACCTCC AGATATCTGCTTGGAACCCCGGGAGCCTGTTGTCAACGACGAGATGTGTGACGTCTGTGAAGTCTGGACC GCTGAGAGCCTCTTCCCATGCAGAGTCTGCACCAGGGTTTTCCACGATGGTTGCCTGCGCCGCATGGGCT ACCTCCAAGGGGACAGTGCAGTGGAGGTGACTGAGATGGCCCATACAGAGACAGGCTGGAGCTGTTACTA CTGTGACAACCTTAACCTGCTGCTTACTGAGGAGGAGATGTATAGCCTTACTGAGACCTTTCAGCGGTGT AAAGTCATCCCTGATTGCTCCCTGACACTGGAGGACTTTGTGCGCTACCGCCACCAAGCAGCAAAGCGAG GGGAGAGCAGCAGGGCCCTGACTGACGAGCAAGAGGAGCAGGCAGCCCGCCAGTTTGCAGCCTTGGACCC TGAACAACGGGGTCACGTAGAGTGGTCCGACTTCTTGTCCCACGAATCCCTTCTTCTGCTGCTGCAGCTG CGTCCCCAGAACTCTCTCTTGAGGCTCCTTACTGTCAAGGAGAGGGAACGAGCCCGAGCCACCTTCCTGG CACGGGGCAGAGGGAGCACCATCAGCGAGGCGGAGTGCCACCATGCCCGGCATTCTTGGTTCTGTAAACG CCTTACAGAGGCTCCTTCCTGCAGTGTCAGCATCAGCCATGTTGGGCCTATAGCAGACAGCAGCCCAGCT GCCAGCAGCAGCAAGAGTCAGGAGAAGGCCCTGCTGCCCACAGAGCAGGAGTCCAGATACGTGGATTGGC CCACCTTCCTAAGAGAGAACGTCATCTACATCTTGGCTGCTCGTCCTAACAGCGGAGCGATCCACCTGAA GCCCCCAGGATAG
Translation (400 aa): MGVLMSKRQTVEQVQKVSLAVSAFKDGLRDRPSIRRGGELPGSRRGTVEGSVQEVQEEKEAEASAPVVQE ESSINRAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDDDKPPDICLEPREPVVNDEMCDVCEVWT AESLFPCRVCTRVFHDGCLRRMGYLQGDSAVEVTEMAHTETGWSCYYCDNLNLLLTEEEMYSLTETFQRC KVIPDCSLTLEDFVRYRHQAAKRGESSRALTDEQEEQAARQFAALDPEQRGHVEWSDFLSHESLLLLLQL RPQNSLLRLLTVKERERARATFLARGRGSTISEAECHHARHSWFCKRLTEAPSCSVSISHVGPIADSSPA ASSSKSQEKALLPTEQESRYVDWPTFLRENVIYILAARPNSGAIHLKPPG
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