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Report for CCDS84765.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84765.1 Public Mus musculus 4 Cyb5rl 23 108 98 CCDS HistoryNCBI Gene:230582Re-query CCDS DB by CCDS ID:84765.1Re-query CCDS DB by GeneID:230582See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84765.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106758.7 ENSMUSP00000102369.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106758.7Link to Ensembl Protein Viewer:ENSMUSP00000102369.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106758Re-query CCDS DB by Protein ID:ENSMUSP00000102369
Original member NCBI NM_001346552.1 NP_001333481.1 Updated not alive Link to Nucleotide Sequence:NM_001346552.1Link to Protein Sequence:NP_001333481.1Re-query CCDS DB by Nucleotide ID:NM_001346552Re-query CCDS DB by Protein ID:NP_001333481
Current member NCBI NM_001346552.2 NP_001333481.1 Accepted alive Link to Nucleotide Sequence:NM_001346552.2Link to Protein Sequence:NP_001333481.1Re-query CCDS DB by Nucleotide ID:NM_001346552Re-query CCDS DB by Protein ID:NP_001333481Link to BLAST:NP_001333481.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333481.1 316 B1AS42-1 316 100% 0 0

Chromosomal Locations for CCDS 84765.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 107068623 107068823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107070870 107071018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107073873 107073960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107077676 107077780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107080891 107081094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 107084127 107084330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGCTGAGACGGAGGAGGAGGAGGATTCTGAGGCTTGGCTGCGGTTGAAGCCTGTGGAGCCCTTGCCCT
CCCAGTGCTGCGGCAGTGGCTGCTCGCCCTGTGTTTTTGACCTCTACTACCGAGACCTGGAAAGATGGGA
AACAGCCCGAGCCAGAAATGACAGGAGCCTGCTGAGTGGGAAGCAACCACCTGAGAGCCAGAGCTGTTCT
GCCAAGCTGAGTCCAGAGACTTTCCTGGCCTTCCACATCAGCACCATGGAGAAGGTCACCAAGGACACCT
ATCTTGTCCGGTTTACACTACCCGGGAACAGTCGGCTCGGCCTGCGTCCTGGACAGCACCTCATCCTACG
AGGTGTAGTAGATGGCTTAGAGATTCAGAGAGCCTACACTCCCATCAGCCCTGTCACTGCAGAAGGATAC
TTTGACGTTTTAATCAAGTGCTACCGGACTGGGCTGATGTCCCAGTATGTGGAGTCATGGAGAACAGGAG
ACACAGCCTTCTGGCGAGGGCCTTTCGGAAGCTTCTTATATGAACCAAAGAAGTACGGCGAGCTCCTCAT
GCTAGCGGCTGGCACAGGCCTGGCCCCCATGGTGCCAATCCTGCAGAGCATCACAGACGACGAAGATGAT
GAGACCTTTGTCACCTTGGTCGGCTGCTTCAAGACCTTCGAGGGCATCTACCTGAAGACCTTCTTCCAGG
AACAGGCCAGGTTCTGGAACGTGCAAACCTTCTTTGTCCTCAGTCAGGAGGTCTCCCCAGAACAGCTTCC
CTGGAGCTACCGTGACAAGACCCATTTTGGCCGCCTGGGCCAGGAGCTGGTTGCTGAACTGGTGGCCTGC
TGCCGGAGAAAGCCGTTTACCTTAGTCTGTGGCTCACCTGCATTTAATGAGGACATGGCTAGGTGTTTGC
TGTCTGCTGGCCTGACTGAGGACTCCTACTTCCTCTTCTAG

Translation (316 aa):
MAETEEEEDSEAWLRLKPVEPLPSQCCGSGCSPCVFDLYYRDLERWETARARNDRSLLSGKQPPESQSCS
AKLSPETFLAFHISTMEKVTKDTYLVRFTLPGNSRLGLRPGQHLILRGVVDGLEIQRAYTPISPVTAEGY
FDVLIKCYRTGLMSQYVESWRTGDTAFWRGPFGSFLYEPKKYGELLMLAAGTGLAPMVPILQSITDDEDD
ETFVTLVGCFKTFEGIYLKTFFQEQARFWNVQTFFVLSQEVSPEQLPWSYRDKTHFGRLGQELVAELVAC
CRRKPFTLVCGSPAFNEDMARCLLSAGLTEDSYFLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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