CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS84948.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
84948.1 |
Public |
Mus musculus |
5 |
Med13l |
23 |
108 |
98 |
|
Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 84948.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000201010.1 |
ENSMUSP00000144092.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001347445.1 |
NP_001334374.1 |
Updated |
not alive |
|
|
|
NCBI |
NM_001347445.2 |
NP_001334374.1 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 84948.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6651 nt): ATGACCGCCGCGGCGAACTGGGTAGCGAACGGGGCGAGCCTGGAGGATTGTCACTCCAACCTCTTCTCGC TGGCTGAACTCACAGGAATCAAATGGCGTAGGTACAATTTTGGAGGGCACGGGGACTGTGGACCCATAAT TTCAGCCCCAGCCCAAGATGATCCAATCCTGTTAAGTTTCATCCGCTGTCTGCAAGCCAACCTGCTGTGT GTATGGCGTCGTGATGTCAAGCCAGATTGCAAAGAGCTCTGGATATTCTGGTGGGGAGATGAACCCAACC TAGTGGGAGTAATACATCATGAACTGCAGGTTGTGGAAGAAGGACTCTGGGAAAATGGCCTTTCCTATGA ATGTAGGACGCTGCTCTTCAAAGCAATCCACAATCTGTTAGAAAGGTGCCTAATGGATAAGAACTTCGTG CGGATCGGGAAGTGGTTTGTGCGGCCCTATGACAAGGATGAAAAGCCAGTCAACAAAAGTGAGCATCTTT CCTGTGCTTTCACATTCTTCCTTCATGGAGAGAGTAACGTGTGCACAAGTGTGGAGATAGCTCAGCACCA GCCGATCTATTTGATCAACGAGGAACACTTACACATGGCCCAATCTTCACCTGCACCATTTCAAGTACTG GTGAGTCCTTACGGCTTAAATGGCACACTAACAGGGCATGCATACAAGATGTCTGACCCGGCCGCCCGCA AGCTGATTGAGGAATGGCACTGTTTCTACCCGATGGTGCTGAGGAAGAGGGAGGAGCCTCGAGAAGAGGC TGAGCTGGGGTATGACGACGACTTCCCGGTGGCAGTTGAAGTCATTGTTGGTGGCGTCCGGATGGTCTAC CCTTCGGCTTTCGTGTTGGTCTCTCAGAATGACATCCCAGTTCCTCAGAGTGGGCACGGCACAGTTGCAC AGCAGGGGCTTGGTAGTGTGAAAGACCCCAGTAACTGTGGGATGCCTCTGACGCCTCCCACCTCCCCAGA GCAGGTGGTTATAGGAGAGAGCGGAGGTGTGCAGAGTGCTGCCAGTCACCTCGGTTCCCAGGATGGAGGG ATGTCAACTATGCACAGTCCGAAGAGATCAAGGAAGACCCCTCCTAAACTGCACAGTCACATGGTCCGTC GAGTCTGGCGGGAGTGCATCCTCAGCCGAGCCCAGTCTAAGAGGAGCCAGATGTCGACGCCCACTCGGGA AGAAGAGGCTGCTCACAGTCCTGCTGCCTGGGATTTTGTGGACCCAACCCAAAGAGTCAGCTGCTCCTGC TCCAGGCATAAACTGTTAAAACGGTGTGCAGTAGGACCCAGCCGACCTCCCGCCATCTCTCAGCCAGGCT TCAGTGCAGGACTGCCATCATCTTCATCCTTACCACCCCCTGCTTCTTCCAAGCACAAAACCACAGAAAG ACAAGAAAAAGGAGACAAGTTGCAAAAGAGACCCTTGGTGCCCTTTCACCATAGGCCCTCTGTGGCCGAA GAATTATGCGTGGAGCAGGATGCGCCTGGGCAGAAGCTAGGGCTGGCAGGGATAGACGCCTCCTTAGAGG TGTCGAACACTCGAAAGTATGATAAGCAAATGGCCGTGCCTTCCAGAAATACAAGCAAGCAAATGAATCT GAATCCTATGGATTCTCCTCATTCCCCCATCTCCCCTCTGCCCCCCACACTCAGCCCTCAGCCACGAGGT CAGGAGGCAGAGAGTTTGGACCCACCTTCTGTCCCTGTGAACCCTGCCCTCTATGGAAATGGGCTAGACC TTCAGCAGCTGTCTACTATAGAGGACAGAACTGTCCTCGTAGGCCAAAGACTGCCTCTGATGGCAGAGGC CAGTGAGACAGCCTTGTACAGTGGGCTCAGGCCTTCATACACCGAGTCGTCAGACAGGTGGTGGCAGAGT TTTCGTCTCCCATCCAGTGAGGATGCTGAGTTCCGGCCTCCAGAGCTGCAGGGGGAGAGGTTTGACACTG CCCTGGACCTGAATCCCGAGAGCACGGCCCTGCAAAGACTCTTAGCACAACCTAACAAGCGGTTCAAAAT CTGGCAGGATGAGCAGCCTCAGGTGCAGCCTCTCCCCTTCCTCGACCCATCACCTCTGTCCCAGCAGCCT GGAGACACTCTGGGAGAAGTCAACGACCCATACACCTTTGAGGATGGCGACATAAAGTACATCTTCACAG CAAATAAGAAATGCAAGCAGGGGACGGAGAAGGACTCCCTGAAAAAGAACAAGTCAGAGGATGGATTTGG TACCAAGGATGTCACTACACCAGGTCATTCCACGCCGGTGCCTGATGGGAAAAATGCCATGTCTATTTTC AGTTCTGCTACTAAAACAGATGTCCGGCAGGACAGCGCTGCTGGCAGAGCCGGCTCTGGGAGCCTTACCC AGGTGACAGATTTGGCACCTTCCCTGCACGACTTAGACAACATCTTTGATAACTCTGATGAAGACGAGCT TGGGGCCGTGTCCCCTGCTCTACGTTCATCCAAGATGCCTACTGTTGGGACTGAGGAGCGGCCCCCTGGG AAGGACGGAAGAGCTGCTGGCCCTTACCCTCCAACAGTTGCAGACTTGCAAAGGATGTTCCCCACCCCTC CGTCATTGGAACAGCACCCTGCATTTTCTCCTGTGATGAACTATAAAGATGGAGTAAGTTCAGAGACAGT GACTGCACTGGGCATGATGGAGAGTCCCGTGGTCAGCATGGTCCCCACACACCTCACGGAGTTTAGGATG GAAGTGGAAGATGGCTTAGGAAGCCCCAAGCCAGAGGAGATAAAGGACTTTTCCTATGTGCACAAAGTGC CGCAGTTCCAGCCTTTCGTGGGATCCTCCATGTTTGCTCCACTGAAGACGCTGCCGAGCCATTGCCTGCT GCCTCTGAAGACACCTGACGCCTGTCTGTTCCGGCCCTCATGGGCGGTCCCTCCTAAGATGGAACAGCTG CCCATGCCCCCTGCAGCCTCTTCTATTAGAGACGGCTACAATAACGTGCCTAGTGTCGGGAGCCTTGCAG ACCCAGACTATCTGAACACACCACAGATGAACACACCTGTGACACTCAACAGCGCCGCCCCTGCCAGCAA CAGTGGAGCTGGAGTTCTCCCATCTCCAGCTACCCCTCGGTTCTCTGTCCCCACACCACGAACCCCCAGG ACTCCAAGAACTCCCAGAGGTGGGGGCACTGCTAGTGGCCAAGGGTCTGTGAAATATGACAGCACAGATC AGGGGTCACCAGCTTCCACCCCCTCTACCACAAGGCCCCTTAACTCTGTGGAGCCTGCCACCATGCAGCC AATTCCTGAGGCCCACAGTCTCTATGTCACCCTCATTCTGTCAGATTCTGTGATGAATGTCTTCAAGGAC AGGAACTTTGACAGCTGTTGCATTTGTGCCTGCAACATGAACATCAAAGGGGCAGATGTCGGGCTGTACA TCCCCGATTCCTCCAAGGAGGACCAGTACCGCTGCACCTGTGGGTTTAGTGCGATCGTGAACCGTAAACT TGGCTACAACTCGGGGCTCTTCCTCGAAGATGAGCTGGATATTTTTGGCAAGAATTCTGACATCGGCCAA GCTGCAGAAAGACGCCTGATGATGTGCCAGTCCTCCGGCCAGTCCACCTTGCTTCCTCAGGTGGAGGGTG CCCGGAAAGCCCCAGAGCCCCCCGTAAGCCTCCTCCTCCTCCTTCAGAATCAGCACACGCAGCCCTTCGC TTCTCTCAGCTTCCTGGATTACATCTCCTCCGCCAATCGCCATGCACTCCCCTGTGTGAGCTGGACTTAT GACCGTGTGCAGGCAGATAACAATGATTACTGGACAGAGTGCTTCAACGCATTGGAACAGGGGAGGCAAT ATGTGGATAATCCCACAGGCGGGAAAGTGGACGAGGCTCTGGTGAGAAGTGCCACCGTACATTGTTGGCC GCACAGCAACGTGCTGGACACAAGCATGCTCTCATCCCAAGATGTGGTGCGCATGCTGCTGTCCCTGCAG CCCTTCCTGCAGGATGCCATCCAGAAGAAGCGCACGGGCAGGACCTGGGAGAACATCCAGCATGTGCAGG GGCCGCTCACCTGGCAGCAGTTCCATAAGATGGCGGGGCGCGGGACCTACGGTTCCGAAGAGTCTCCTGA GCCGCTGCCCATCCCCACTCTGCTGGTGGGCTACGACAAGGAGTTCTTGACCATCTCGCCCTTCTCCTTG CCCTTCTGGGAGAGGCTGCTCTTGGAGCCCTATGGGGGCCACCGTGATGTTGCTTATATTGTGGTGTGTC CAGAAAATGAGGCCTTGCTCGAAGGAGCCAAAACTTTCTTCAGGGACTTGAGTGCTGTATATGAGATGTG TCGGCTGGGACAGCACAAGCCCATCTGCAAAGTGCTCCGTGATGGGATCATGCGTGTGGGCAAGACCGTG GCGCAGAAGCTGACAGAGGAGCTTGTGAGCGAGTGGTTTAACCAGCCATGGAGCAGTGAGGAGAGTGACA ATCATTCCAGACTCAAACTTTATGCTCAAGTTTGCCGCCATCACCTAGCACCTTATTTAGCCACTCTGCA GCTCGACAGTGGCCTGCTGATGCCACCTAAGCACCAGAGCCCACCAGCAGAAGCACAGGGACAAGCCACG CCTGGGAATGCTGGGTCTTTACCTTCGAATTCAGGCTCAGGAGCACCTCCAGCTGGCAGTGCATTCAATC CCACCTCCAGCAGCTCTGCAAACCCCACAACAAGTAGTTCATCTGCCTCCTCTGGGCCGCCAGGCTCCTC AGCTGCCTCTGCTCCAGGCATCACTCAGATGAACACTACCTCTTCTTCAGGATTCGGTGGTGGTGTTGGA GGGCAGAACCCCAGTGCGGGGGGCAGCTCTACAGATCGAACCCCAGGGAATGTGGCTTGTGGAGACACTG AGCCTGGGCAGAGCTGCACCCAGTCCTCACAGGATGGACAAGACAGTGTTACAGAGAGGGAGAGAATAGG AATCCCCACGGAGCCTGACTCTGCAGACAGCCATGCCTACCCTCCAGCCGTCGTCATTTACATGGTGGAC CCCTTCACCTACACTGCGGAGGAGGACTCCAGCTCTGGAAACTTCTGGCTGCTGAGCTTGATGCGCTGCT ACACGGAGATGCTGGATCACTTACCCGAGCACATGAGAAGCTCGTTCATTCTCCAGATTGTGCCTTGCCA GTACATGCTGCAGACCATGAAGGATGAGCATGTCTTCTACATTCAATACTTGAAGTCCATGGCGTTCTCA GTGTACTGCCAGTGCAGGCGGCCTCTGCCTACACAGATCCACATTAAATCCCTCACAGGCTTCGGGCCTG CAGCCAGCATTGAGATGACCCTCAAGAACCCGGAGCGGCCCAGTCCAATCCAGCTTTATTCCCCTCCCTT TATATTGGCTCCAATCAAAGACAAGCAGACAGAACCGGGAGAGACCTTTGGTGAGGCGAGCCAGAAATAC AATGTGCTCTTTGTGGGCTATTGTCTGTCTCATGACCAGCGCTGGCTCTTGGCATCCTGCACTGACCTGC ATGGGGAGTTACTGGAGACCTGTGTTGTAAACATTGCTTTACCGAGCAGGACCCTTCATGTTCCTCTGTC TGTCAGGTCACGGAAGAGTAAAGTGTCTGCACGGAAGGTCGGGCTGCAGAAGCTGTGGGAGTGGTGCCTG GGCATTGTCCAGATGACTTCTCTGCCCTGGAGAGTTGTCATTGGCCGCTTGGGGCGTCTTGGCCACGGGG AGCTGAAAGATTGGAGTATCCTCCTTGGAGAATGTTCACTGCAGACAATCAGCAAACAGCTCAAGGATGT GTGCCGAATGTGTGGGATCTCTGCTGCAGACTCTCCTTCCATCCTCAGTGCCTGCTTGGTTGCCATGGAG CCCCAGGGGTCCTTTGTAGTGATGCCAGATGCTGTCACAATGGGCTCTGTGTTTGGCCGAAGCACTGCAT TGAATATGCAGTCGTCCCAGCTGAACACACCTCAGGACGCCTCCTGCACCCACATCTTGGTGTTCCCGAC ATCATCAACCATCCAGGTGGCTCCAGCCAACTACCCCAATGAGGATGGGTTTAGCCCCAACAATGATGAC ATGTTTGTAGACCTTCCATTCCCAGACGACATGGACAATGACATTGGCATCCTCATGACCGGGAACCTCC ACTCCTCTCCCAACTCCTCTCCGGTTCCCTCCCCGGGCTCTCCCTCTGGAATCGGTGTGGGCTCTCACTT CCAGCACAGTCGGAGCCAGGGAGAGCGGCTTCTGTCTCGGGAGGCTCCAGAGGAACTCAAGCAGCAGCCC CTGGCCCTTGGGTATTTTGTGTCCACTGCCAAAGCGGAGAACCTCCCGCAGTGGTTTTGGTCATCGTGCC CCCAGGCCCGGAACCAGTGCCCACTCTTCCTGAAGGCTTCCCTGCATCACCACATCTCTGTAGCGCAGAC CGATGAGCTCCTTCCTGCCAGGACCTCTCAGCGGGCTCCACACCCTCTGGACTCCAAGACCACATCTGAC GTTCTAAGGTTTGTGCTGGAGCAGTACAACGCCCTATCCTGGCTCACGTGCAATCCAGCCACCCAGGACC GCACTTCCTGCCTTCCCGTCCACTTCGTGGTGCTCACGCAGCTGTACAATGCCATCATGAACATGCTCTA A
Translation (2216 aa): MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSFIRCLQANLLC VWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRTLLFKAIHNLLERCLMDKNFV RIGKWFVRPYDKDEKPVNKSEHLSCAFTFFLHGESNVCTSVEIAQHQPIYLINEEHLHMAQSSPAPFQVL VSPYGLNGTLTGHAYKMSDPAARKLIEEWHCFYPMVLRKREEPREEAELGYDDDFPVAVEVIVGGVRMVY PSAFVLVSQNDIPVPQSGHGTVAQQGLGSVKDPSNCGMPLTPPTSPEQVVIGESGGVQSAASHLGSQDGG MSTMHSPKRSRKTPPKLHSHMVRRVWRECILSRAQSKRSQMSTPTREEEAAHSPAAWDFVDPTQRVSCSC SRHKLLKRCAVGPSRPPAISQPGFSAGLPSSSSLPPPASSKHKTTERQEKGDKLQKRPLVPFHHRPSVAE ELCVEQDAPGQKLGLAGIDASLEVSNTRKYDKQMAVPSRNTSKQMNLNPMDSPHSPISPLPPTLSPQPRG QEAESLDPPSVPVNPALYGNGLDLQQLSTIEDRTVLVGQRLPLMAEASETALYSGLRPSYTESSDRWWQS FRLPSSEDAEFRPPELQGERFDTALDLNPESTALQRLLAQPNKRFKIWQDEQPQVQPLPFLDPSPLSQQP GDTLGEVNDPYTFEDGDIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIF SSATKTDVRQDSAAGRAGSGSLTQVTDLAPSLHDLDNIFDNSDEDELGAVSPALRSSKMPTVGTEERPPG KDGRAAGPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGVSSETVTALGMMESPVVSMVPTHLTEFRM EVEDGLGSPKPEEIKDFSYVHKVPQFQPFVGSSMFAPLKTLPSHCLLPLKTPDACLFRPSWAVPPKMEQL PMPPAASSIRDGYNNVPSVGSLADPDYLNTPQMNTPVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPR TPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNVFKD RNFDSCCICACNMNIKGADVGLYIPDSSKEDQYRCTCGFSAIVNRKLGYNSGLFLEDELDIFGKNSDIGQ AAERRLMMCQSSGQSTLLPQVEGARKAPEPPVSLLLLLQNQHTQPFASLSFLDYISSANRHALPCVSWTY DRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHCWPHSNVLDTSMLSSQDVVRMLLSLQ PFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPLPIPTLLVGYDKEFLTISPFSL PFWERLLLEPYGGHRDVAYIVVCPENEALLEGAKTFFRDLSAVYEMCRLGQHKPICKVLRDGIMRVGKTV AQKLTEELVSEWFNQPWSSEESDNHSRLKLYAQVCRHHLAPYLATLQLDSGLLMPPKHQSPPAEAQGQAT PGNAGSLPSNSGSGAPPAGSAFNPTSSSSANPTTSSSSASSGPPGSSAASAPGITQMNTTSSSGFGGGVG GQNPSAGGSSTDRTPGNVACGDTEPGQSCTQSSQDGQDSVTERERIGIPTEPDSADSHAYPPAVVIYMVD PFTYTAEEDSSSGNFWLLSLMRCYTEMLDHLPEHMRSSFILQIVPCQYMLQTMKDEHVFYIQYLKSMAFS VYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPPFILAPIKDKQTEPGETFGEASQKY NVLFVGYCLSHDQRWLLASCTDLHGELLETCVVNIALPSRTLHVPLSVRSRKSKVSARKVGLQKLWEWCL GIVQMTSLPWRVVIGRLGRLGHGELKDWSILLGECSLQTISKQLKDVCRMCGISAADSPSILSACLVAME PQGSFVVMPDAVTMGSVFGRSTALNMQSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDD MFVDLPFPDDMDNDIGILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQP LALGYFVSTAKAENLPQWFWSSCPQARNQCPLFLKASLHHHISVAQTDELLPARTSQRAPHPLDSKTTSD VLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNML
|