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Report for CCDS84950.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84950.1 Public Mus musculus 5 Oas1e 23 108 98 CCDS HistoryNCBI Gene:231699Re-query CCDS DB by CCDS ID:84950.1Re-query CCDS DB by GeneID:231699See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84950.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000201172.1 ENSMUSP00000144529.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000201172.1Link to Ensembl Protein Viewer:ENSMUSP00000144529.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000201172Re-query CCDS DB by Protein ID:ENSMUSP00000144529
Original member Current member NCBI NM_001347450.1 NP_001334379.1 Accepted alive Link to Nucleotide Sequence:NM_001347450.1Link to Protein Sequence:NP_001334379.1Re-query CCDS DB by Nucleotide ID:NM_001347450Re-query CCDS DB by Protein ID:NP_001334379Link to BLAST:NP_001334379.1

Chromosomal Locations for CCDS 84950.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 120786611 120786715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 120787946 120788099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 120788739 120788971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 120791783 120791979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 120794105 120794393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 120795316 120795498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1161 nt):
ATGGCGAGGGAACTCTTCAGAACCCCAATCTGGAGGCTGGATAACTTCATAGAGGATCAACTCCTTCCTG
ACACCACCTTCCTTACTGAGCTCAGAGCAGACATCGACTCCATAAGTGCTTTCCTGAAGGAGAGATGCTT
CCAAGGTGCCACCCACCCTATGAGGGTCGCCAGGGTTGTGATGGGAGGCTCCTATGATGAACACAATGCA
CTCAAGGGAAGGTCAGAGGCCAACATGGTGGTGTTCTTTAATGATCTCACCAGCTTTGAGGACCAGTTAA
AGTGGCAGCAAGTGTTCATTGAAGAAATTCGGAAACACCTGCTCCAGTTGCAGCAAGAGAAGCCATGTAA
ACTCAAGTTTGAGGTGCAGAGCTCAGAGGAGCCCAACACCAGGTCTCTGACCTTCAAGCTGTGCTCCCCA
GAGCGCCAGCAGGAGGTGGAATTTGATGTGCAGCCAGCCTATGATGCTCTGTATGAAGGGGGATACTGCA
AGTCCTTTGAATCCATTAACTACAACAAAGTCTACGCCCAACTCATCCATGAGTGCACCACCCTGGAGAA
GGAGGGCGAGTTCTCCATCTGCTTCACCGACCTTCATCAGAGCTTCCTGAGGTATCGTGCGCCCAAGCTC
TGGAACCTCATCCGTCTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAAGCTGAGGGGACCGCTGCCTC
CACAGTATGCCCTGGAGCTGCTCACAGTCTACGTCTGGGAATTTGGGGTCCAAGACAGCTTTGGACTCCA
TGCAGCCCAGTGCTTCCGAACGGTCTTAGAACTGGTCACCAAGTACAAATGCCTTCTAATCTACTGGACA
TGGTTTTATGACTTTCGACCTGAGATCTCTGACTACCTGCACGGACAGATCAAAAAAGCCAGGCCTCTGA
TCCTGGATCCGGCAGACCCAACAAGGAACGTGGCTGGTTCAGACTTACAGGCATGGGACCTGCTGGCAAA
GGAGGCTCAGACCTGGATACATTCAAATTTTTTTAGGAACTGTGATATGTCCCTTGTGAATGGCTGGGAA
GTGTCGCTTCCAACAGTGTTCTCTGGGAGTCAGGCTGTGATGGACAGAGAAGAACGCAAGCTCGACTTCC
ATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGA

Translation (386 aa):
MARELFRTPIWRLDNFIEDQLLPDTTFLTELRADIDSISAFLKERCFQGATHPMRVARVVMGGSYDEHNA
LKGRSEANMVVFFNDLTSFEDQLKWQQVFIEEIRKHLLQLQQEKPCKLKFEVQSSEEPNTRSLTFKLCSP
ERQQEVEFDVQPAYDALYEGGYCKSFESINYNKVYAQLIHECTTLEKEGEFSICFTDLHQSFLRYRAPKL
WNLIRLVKHWYQLCKEKLRGPLPPQYALELLTVYVWEFGVQDSFGLHAAQCFRTVLELVTKYKCLLIYWT
WFYDFRPEISDYLHGQIKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWIHSNFFRNCDMSLVNGWE
VSLPTVFSGSQAVMDREERKLDFHLSTCWEVLSNSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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