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Report for CCDS85582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85582.1 Public Mus musculus 8 Aktip 23 108 98 CCDS HistoryNCBI Gene:14339Re-query CCDS DB by CCDS ID:85582.1Re-query CCDS DB by GeneID:14339See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85582.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120426.8 ENSMUSP00000113379.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120426.8Link to Ensembl Protein Viewer:ENSMUSP00000113379.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000120426Re-query CCDS DB by Protein ID:ENSMUSP00000113379
Original member Current member NCBI NM_001302337.1 NP_001289266.1 Accepted alive Link to Nucleotide Sequence:NM_001302337.1Link to Protein Sequence:NP_001289266.1Re-query CCDS DB by Nucleotide ID:NM_001302337Re-query CCDS DB by Protein ID:NP_001289266Link to BLAST:NP_001289266.1

Chromosomal Locations for CCDS 85582.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 91112625 91112630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 91124823 91124883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 91125817 91125924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 91126025 91126123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 91126198 91126286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 91126674 91126774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 91126865 91126929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 91129600 91129805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 91131041 91131082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (777 nt):
ATGAACCCTTTGTGGAGCATGTCTGCAGGCTCTGTGCGCAAACGAGCTGAAGGTGAAGAGAAGACATTAG
CAGGAGATGTGAAAACCAGTCCTCCACGAAGTGCACCCAAAAAACAGCTACCTTCTATTCCCAAAAATGC
TCTACCCATAGCGAAGCCTACGTCTCCTGCCCCAGCAGCGCAGTCAACAAACGGCACCCATGCCTCTTAT
GGACCCTTCTACCTGGAATATTCGCTTCTTGCAGAATTTACTCTGGTAGTGAAGCAGAAGCTGCCAGGAG
TCTACGTACAGCCATCTTACCGCTCTGCATTAGTGTGGTTTGGAGTAATATTCATACGGCACGGGCTGTA
TCAGGATGGCGTATTCAAATTTACGGTGTATATTCCTGATAACTATCCTGATGGCGACTGTCCGCGCTTG
CTGTTTGATATTCCCGTCTTTCACCCACTAGTTGATCCCACCTCGGGTGAGCTGGATGTGAAAAGAGCGT
TCGCAAAGTGGAGGCGGAACCATAACCATATATGGCAGGTGTTAATGTATGCGAGGAGAGTCTTCTACAA
GATCGACACGACGAGCCCCCTGAACCCAGAGGCCGCAGTGCTGTATGAAAAAGACATTCAACTTTTTAAA
AGTAAAGTGGTCGACAGTGTTAAAGTGTGTACTGCCCGTCTTTTTGACCAGCCCAAGATAGAAGACCCCT
ACGCCATTAGCTTTTCTCCGTGGAACCCTTCTGTACATGATGAGGCCAGAGAAAAGATGCTGACTCAGAA
GACATAA

Translation (258 aa):
MNPLWSMSAGSVRKRAEGEEKTLAGDVKTSPPRSAPKKQLPSIPKNALPIAKPTSPAPAAQSTNGTHASY
GPFYLEYSLLAEFTLVVKQKLPGVYVQPSYRSALVWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPRL
LFDIPVFHPLVDPTSGELDVKRAFAKWRRNHNHIWQVLMYARRVFYKIDTTSPLNPEAAVLYEKDIQLFK
SKVVDSVKVCTARLFDQPKIEDPYAISFSPWNPSVHDEAREKMLTQKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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