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Report for CCDS8582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8582.1 Public Homo sapiens 12 DPPA3 24 110 108 CCDS HistoryNCBI Gene:359787Re-query CCDS DB by CCDS ID:8582.1Re-query CCDS DB by GeneID:359787See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8582.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000345088.3 ENSP00000339250.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000345088.3Link to Ensembl Protein Viewer:ENSP00000339250.2Re-query CCDS DB by Nucleotide ID:ENST00000345088Re-query CCDS DB by Protein ID:ENSP00000339250
Original member Current member NCBI NM_199286.4 NP_954980.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_199286.4Link to Protein Sequence:NP_954980.1Re-query CCDS DB by Nucleotide ID:NM_199286Re-query CCDS DB by Protein ID:NP_954980Link to BLAST:NP_954980.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_954980.1 159 Q6W0C5 159 100% 0 0

Chromosomal Locations for CCDS 8582.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 7711571 7711652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7715183 7715427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7716198 7716239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7716967 7717077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (480 nt):
ATGGACCCATCACAGTTTAATCCAACCTACATCCCAGGGTCTCCACAAATGCTCACCGAAGAAAATTCCC
GGGACGATTCAGGGGCCTCTCAAATCTCCTCCGAGACGTTGATAAAGAACCTTAGTAACTTGACTATCAA
CGCTAGTAGCGAATCTGTTTCCCCTCTATCGGAAGCTTTACTCCGTCGAGAGTCTGTAGGAGCAGCAGTC
CTCAGGGAAATCGAAGATGAGTGGCTTTACAGCAGGAGAGGAGTAAGAACATTGCTGTCTGTGCAGAGAG
AAAAGATGGCAAGATTGAGATACATGTTACTCGGCGGAGTTCGTACGCATGAAAGAAGACCAACAAACAA
GGAGCCTAAGGGAGTTAAGAAGGAATCAAGACCATTCAAATGTCCCTGCAGTTTCTGCGTGTCTAATGGA
TGGGATCCTTCTGAGAATGCTAGAATAGGGAATCAAGACACCAAGCCACTTCAGCCATAA

Translation (159 aa):
MDPSQFNPTYIPGSPQMLTEENSRDDSGASQISSETLIKNLSNLTINASSESVSPLSEALLRRESVGAAV
LREIEDEWLYSRRGVRTLLSVQREKMARLRYMLLGGVRTHERRPTNKEPKGVKKESRPFKCPCSFCVSNG
WDPSENARIGNQDTKPLQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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