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Report for CCDS8653.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8653.1 Public Homo sapiens 12 CDKN1B 24 110 108 CCDS HistoryNCBI Gene:1027Re-query CCDS DB by CCDS ID:8653.1Re-query CCDS DB by GeneID:1027See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8653.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000228872.9 ENSP00000228872.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000228872.9Link to Ensembl Protein Viewer:ENSP00000228872.4Re-query CCDS DB by Nucleotide ID:ENST00000228872Re-query CCDS DB by Protein ID:ENSP00000228872
Original member Current member EBI ENST00000614874.2 ENSP00000507272.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614874.2Link to Ensembl Protein Viewer:ENSP00000507272.1Re-query CCDS DB by Nucleotide ID:ENST00000614874Re-query CCDS DB by Protein ID:ENSP00000507272
Original member Current member NCBI NM_004064.5 NP_004055.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004064.5Link to Protein Sequence:NP_004055.1Re-query CCDS DB by Nucleotide ID:NM_004064Re-query CCDS DB by Protein ID:NP_004055Link to BLAST:NP_004055.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004055.1 198 P46527 198 100% 0 0

Chromosomal Locations for CCDS 8653.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 12717840 12718314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 12718825 12718946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (597 nt):
ATGTCAAACGTGCGAGTGTCTAACGGGAGCCCTAGCCTGGAGCGGATGGACGCCAGGCAGGCGGAGCACC
CCAAGCCCTCGGCCTGCAGGAACCTCTTCGGCCCGGTGGACCACGAAGAGTTAACCCGGGACTTGGAGAA
GCACTGCAGAGACATGGAAGAGGCGAGCCAGCGCAAGTGGAATTTCGATTTTCAGAATCACAAACCCCTA
GAGGGCAAGTACGAGTGGCAAGAGGTGGAGAAGGGCAGCTTGCCCGAGTTCTACTACAGACCCCCGCGGC
CCCCCAAAGGTGCCTGCAAGGTGCCGGCGCAGGAGAGCCAGGATGTCAGCGGGAGCCGCCCGGCGGCGCC
TTTAATTGGGGCTCCGGCTAACTCTGAGGACACGCATTTGGTGGACCCAAAGACTGATCCGTCGGACAGC
CAGACGGGGTTAGCGGAGCAATGCGCAGGAATAAGGAAGCGACCTGCAACCGACGATTCTTCTACTCAAA
ACAAAAGAGCCAACAGAACAGAAGAAAATGTTTCAGACGGTTCCCCAAATGCCGGTTCTGTGGAGCAGAC
GCCCAAGAAGCCTGGCCTCAGAAGACGTCAAACGTAA

Translation (198 aa):
MSNVRVSNGSPSLERMDARQAEHPKPSACRNLFGPVDHEELTRDLEKHCRDMEEASQRKWNFDFQNHKPL
EGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLIGAPANSEDTHLVDPKTDPSDS
QTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSPNAGSVEQTPKKPGLRRRQT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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