NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS86613.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86613.1 Public Homo sapiens 17 GOSR2 24 110 108 CCDS HistoryNCBI Gene:9570Re-query CCDS DB by CCDS ID:86613.1Re-query CCDS DB by GeneID:9570See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86613.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393456.7 ENSP00000377101.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393456.7Link to Ensembl Protein Viewer:ENSP00000377101.3Re-query CCDS DB by Nucleotide ID:ENST00000393456Re-query CCDS DB by Protein ID:ENSP00000377101
Original member Current member EBI ENST00000640068.1 ENSP00000491682.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000640068.1Link to Ensembl Protein Viewer:ENSP00000491682.1Re-query CCDS DB by Nucleotide ID:ENST00000640068Re-query CCDS DB by Protein ID:ENSP00000491682
Original member Current member NCBI NM_001321134.2 NP_001308063.1 Accepted alive Link to Nucleotide Sequence:NM_001321134.2Link to Protein Sequence:NP_001308063.1Re-query CCDS DB by Nucleotide ID:NM_001321134Re-query CCDS DB by Protein ID:NP_001308063Link to BLAST:NP_001308063.1

Chromosomal Locations for CCDS 86613.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 46929545 46929584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46931099 46931207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46932067 46932199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46938599 46938760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGGGACGCCTGGAGACGGCAGACAAGCAGTCTGTGCACATAGTAGAAAACGAAATCCAAGCAAGCATAG
ACCAGATATTCAGCCGTCTAGAACGTCTGGAGATTTTGTCCAGCAAGGAGCCCCCTAACAAAAGGCAAAA
TGCCAGACTTCGGGTTGACCAGTTAAAGTATGATGTCCAGCACCTGCAGACTGCGCTCAGAAACTTCCAG
CATCGGCGCCATGCAAGGGAGCAGCAGGAGAGACAGCGAGAAGAGCTTCTGTCTCGAACCTTCACCACTA
ACGGGACTCAGAAGAAGATCCTTGACATTGCCAACATGCTGGGCTTGTCCAACACAGTGATGCGGCTCAT
CGAGAAGCGGGCTTTCCAGGACAAGTACTTTATGATAGGTGGGATGCTGCTGACCTGTGTGGTCATGTTC
CTCGTGGTGCAGTACCTGACATGA

Translation (147 aa):
MGRLETADKQSVHIVENEIQASIDQIFSRLERLEILSSKEPPNKRQNARLRVDQLKYDVQHLQTALRNFQ
HRRHAREQQERQREELLSRTFTTNGTQKKILDIANMLGLSNTVMRLIEKRAFQDKYFMIGGMLLTCVVMF
LVVQYLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH