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Report for CCDS86766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86766.1 Public Homo sapiens 19 PLEKHG2 24 110 108 CCDS HistoryNCBI Gene:64857Re-query CCDS DB by CCDS ID:86766.1Re-query CCDS DB by GeneID:64857See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86766.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409797.6 ENSP00000386492.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409797.6Link to Ensembl Protein Viewer:ENSP00000386492.1Re-query CCDS DB by Nucleotide ID:ENST00000409797Re-query CCDS DB by Protein ID:ENSP00000386492
Original member Current member NCBI NM_001351694.2 NP_001338623.1 Accepted alive Link to Nucleotide Sequence:NM_001351694.2Link to Protein Sequence:NP_001338623.1Re-query CCDS DB by Nucleotide ID:NM_001351694Re-query CCDS DB by Protein ID:NP_001338623Link to BLAST:NP_001338623.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001338623.1 577 Q9H7P9-2 577 100% 0 0

Chromosomal Locations for CCDS 86766.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39414087 39414195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39414992 39415260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39415339 39415439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39416348 39416414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39416551 39416597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39416850 39417000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39417555 39417692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39417905 39418105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39418734 39418826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39418917 39419003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39420626 39420659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39420751 39420852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39420949 39420996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39421075 39421113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39421283 39421299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39422115 39422288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39425238 39425294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1734 nt):
ATGCCTGAGGGAGCCCAAGGACTGAGCCTCTCCAAACCTAGCCCAAGCCTCGGGTGTGGCCGAAGAGGTG
AAGTGTGTGACTGTGGCACCGTGTGTGAGACTCGGACAGCTCCTGCAGCCCCCACCATGGCCTCCCCCCG
AGGTTCTGGGAGCTCCACATCCCTGAGCACAGTGGGCTCTGAGGGGGATCCAGCCCCTGGGCCCACTCCA
GCCTGCTCAGCCTCCAGGCCAGAGCCCCTTCCAGGGCCTCCCATCCGCCTACATCTCTCTCCGGTGGGGA
TCCCAGGTTCAGCCAGACCCTCAAGGCTGGAGCGTGTGGCCCGGGAGATCGTGGAGACAGAACGGGCCTA
TGTCAGGGACCTCCGCAGCATCGTGGAGGACTACCTGGGCCCTCTGCTGGACGGCGGGGTCCTGGGGCTG
AGCGTGGAGCAGGTGGGCACGCTGTTTGCCAACATTGAGGACATCTACGAGTTCAGCAGCGAGCTCCTGG
AGGACTTGGAGAACAGCAGCAGCGCCGGGGGTATTGCCGAGTGCTTCGTGCAGAGGAGCGAGGATTTTGA
CATCTACACATTGTACTGCATGAACTACCCGAGCTCCCTGGCCCTGCTCCGGGAGCTGTCGTTGTCTCCG
CCAGCAGCCCTGTGGCTGCAGGAGCGCCAGGCCCAGCTTCGCCACTCGCTGCCCCTGCAGAGCTTCCTGC
TGAAACCTGTCCAGCGCATTCTCAAGTACCATCTGCTGCTGCAGGAACTAGGGAAGCACTGGGCGGAGGG
CCCAGGCACTGGGGGTCGCGAGATGGTGGAGGAAGCTATTGTGTCCATGACAGCGGTTGCCTGGTACATC
AACGACATGAAGCGCAAGCAGGAGCATGCAGCGCGCCTCCAGGAAGTGCAGCGGCGGCTGGGTGGCTGGA
CCGGACCAGAGCTCAGTGCTTTTGGGGAACTGGTGTTGGAGGGCGCGTTCCGAGGAGGCGGAGGGGGTGG
CCCCCGGCTACGAGGGGGTGAGCGGCTGCTCTTCCTGTTCTCTCGGATGCTGCTGGTGGCCAAGCGCAGG
GGGCTGGAGTACACCTACAAAGGCCACATCTTCTGCTGCAACCTGAGCGTGAGCGAGAGTCCCCGAGACC
CTCTAGGGTTCAAGGTGTCTGATCTGACCATTCCCAAGCACAGACACCTGCTCCAGGCCAAGAACCAAGA
AGAGAAGAGGCTGTGGATTCACTGTCTCCAGCGCCTCTTCTTTGAGAACCACCCTGCCTCCATCCCTGCC
AAGGCAAAGCAAGTTCTCCTTGAAAACAGCCTGCATTGTGCCCCCAAAAGTAAGCCTGTCCTAGAGCCCC
TGACACCCCCACTTGGGTCTCCTCGACCTCGAGATGCTAGAAGTTTTACCCCTGGGCGAAGGAACACAGC
TCCATCTCCTGGGCCCTCTGTGATTCGCCGAGGCCGCAGGCAGTCTGAGCCGGTGAAGGACCCTTATGTC
ATGTTCCCACAGAACGCTAAGCCTGGATTCAAGCACGCTGGCAGCGAAGGGGAACTCTACCCTCCAGAAT
CTCAGCCACCAGTTTCAGGCTCTGCACCCCCTGAGGACCTGGAGGATGCTGGACCCCCAACACTGGACCC
CTCTGGGACCTCAATCACTGAAGAAATCCTGGAACTGCTGAATCAGCGAGGCCTTCGAGATCCAGGGGAA
TCTATGGGCCTTCACAGGGCCCAGGGGGCTCCTGATGCCCCCTTCCACATGTGA

Translation (577 aa):
MPEGAQGLSLSKPSPSLGCGRRGEVCDCGTVCETRTAPAAPTMASPRGSGSSTSLSTVGSEGDPAPGPTP
ACSASRPEPLPGPPIRLHLSPVGIPGSARPSRLERVAREIVETERAYVRDLRSIVEDYLGPLLDGGVLGL
SVEQVGTLFANIEDIYEFSSELLEDLENSSSAGGIAECFVQRSEDFDIYTLYCMNYPSSLALLRELSLSP
PAALWLQERQAQLRHSLPLQSFLLKPVQRILKYHLLLQELGKHWAEGPGTGGREMVEEAIVSMTAVAWYI
NDMKRKQEHAARLQEVQRRLGGWTGPELSAFGELVLEGAFRGGGGGGPRLRGGERLLFLFSRMLLVAKRR
GLEYTYKGHIFCCNLSVSESPRDPLGFKVSDLTIPKHRHLLQAKNQEEKRLWIHCLQRLFFENHPASIPA
KAKQVLLENSLHCAPKSKPVLEPLTPPLGSPRPRDARSFTPGRRNTAPSPGPSVIRRGRRQSEPVKDPYV
MFPQNAKPGFKHAGSEGELYPPESQPPVSGSAPPEDLEDAGPPTLDPSGTSITEEILELLNQRGLRDPGE
SMGLHRAQGAPDAPFHM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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