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Report for CCDS87023.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87023.1 Public Homo sapiens 22 ANKRD54 24 110 108 CCDS HistoryNCBI Gene:129138Re-query CCDS DB by CCDS ID:87023.1Re-query CCDS DB by GeneID:129138See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87023.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000406423.5 ENSP00000384392.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406423.5Link to Ensembl Protein Viewer:ENSP00000384392.1Re-query CCDS DB by Nucleotide ID:ENST00000406423Re-query CCDS DB by Protein ID:ENSP00000384392
Original member Current member NCBI NM_001363839.1 NP_001350768.1 Accepted alive Link to Nucleotide Sequence:NM_001363839.1Link to Protein Sequence:NP_001350768.1Re-query CCDS DB by Nucleotide ID:NM_001363839Re-query CCDS DB by Protein ID:NP_001350768Link to BLAST:NP_001350768.1

Chromosomal Locations for CCDS 87023.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 37831943 37832017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37832637 37832744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37832958 37833082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37833159 37833206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37833684 37833755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37838500 37838593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37840187 37840207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (543 nt):
ATGCCAATGATGTGGAAACAGCAGCTGCTGGAAGATGGCGCGGATCCCTGTGCAGCTGATGACAAGGGCC
GCACAGCTCTACACTTTGCCTCATGCAATGGCAATGACCAGATTGTGCAGCTGCTCCTGGACCATGGTGC
TGATCCTAACCAGCGAGATGGGCTGGGGAACACGCCACTGCACCTGGCGGCCTGCACCAACCACGTTCCT
GTCATCACCACACTGCTACGAGGAGGGGCCCGTGTAGATGCCCTGGACCGAGCTGGTCGCACACCCCTGC
ACCTGGCCAAGTCAAAGCTGAATATCCTGCAGGAGGGCCATGCCCAGTGCCTAGAGGCTGTGCGTCTGGA
GGTGAAGCAGATCATCCATATGCTGAGGGAGTATCTGGAGCGCCTAGGGCAACATGAGCAGCGAGAACGC
CTGGATGACCTCTGCACCCGCCTGCAGATGACCAGTACCAAAGAGCAGGTGGATGAAGTGACTGACCTCC
TGGCCAGCTTCACCTCCCTCAGTCTGCAGATGCAGAGCATGGAGAAGAGGTAG

Translation (180 aa):
MPMMWKQQLLEDGADPCAADDKGRTALHFASCNGNDQIVQLLLDHGADPNQRDGLGNTPLHLAACTNHVP
VITTLLRGGARVDALDRAGRTPLHLAKSKLNILQEGHAQCLEAVRLEVKQIIHMLREYLERLGQHEQRER
LDDLCTRLQMTSTKEQVDEVTDLLASFTSLSLQMQSMEKR


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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