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Report for CCDS87446.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
87446.1 |
Public |
Homo sapiens |
6 |
IFNGR1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:3459](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:87446.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:3459](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 6 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 87446.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000414770.6 |
ENSP00000394230.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000414770.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000394230.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000414770](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000394230](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000646898.1 |
ENSP00000494069.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000646898.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000494069.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000646898](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000494069](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000646036.1 |
ENSP00000496387.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000646036.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000496387.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000646036](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000496387](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001363526.1 |
NP_001350455.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001363526.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001350455.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001363526](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001350455](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001350455.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 87446.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1440 nt): ATGCTTTTGAAGTCACCAGAAAATAGTCTTCTCCAATTCCAATTTAAATATGGAGTGCCTACACCAACTA ATGTTACAATTGAATCCTATAACATGAACCCTATCGTATATTGGGAGTACCAGATCATGCCACAGGTCCC TGTTTTTACCGTAGAGGTAAAGAACTATGGTGTTAAGAATTCAGAATGGATTGATGCCTGCATCAATATT TCTCATCATTATTGTAATATTTCTGATCATGTTGGTGATCCATCAAATTCTCTTTGGGTCAGAGTTAAAG CCAGGGTTGGACAAAAAGAATCTGCCTATGCAAAGTCAGAAGAATTTGCTGTATGCCGAGATGGAAAAAT TGGACCACCTAAACTGGATATCAGAAAGGAGGAGAAGCAAATCATGATTGACATATTTCACCCTTCAGTT TTTGTAAATGGAGACGAGCAGGAAGTCGATTATGATCCCGAAACTACCTGTTACATTAGGGTGTACAATG TGTATGTGAGAATGAACGGAAGTGAGATCCAGTATAAAATACTCACGCAGAAGGAAGATGATTGTGACGA GATTCAGTGCCAGTTAGCGATTCCAGTATCCTCACTGAATTCTCAGTACTGTGTTTCAGCAGAAGGAGTC TTACATGTGTGGGGTGTTACAACTGAAAAGTCAAAAGAAGTTTGTATTACCATTTTCAATAGCAGTATAA AAGGTTCTCTTTGGATTCCAGTTGTTGCTGCTTTACTACTCTTTCTAGTGCTTAGCCTGGTATTCATCTG TTTTTATATTAAGAAAATTAATCCATTGAAGGAAAAAAGCATAATATTACCCAAGTCCTTGATCTCTGTG GTAAGAAGTGCTACTTTAGAGACAAAACCTGAATCAAAATATGTATCACTCATCACGTCATACCAGCCAT TTTCCTTAGAAAAGGAGGTGGTCTGTGAAGAGCCGTTGTCTCCAGCAACAGTTCCAGGCATGCATACCGA AGACAATCCAGGAAAAGTGGAACATACAGAAGAACTTTCTAGTATAACAGAAGTGGTGACTACTGAAGAA AATATTCCTGACGTGGTCCCGGGCAGCCATCTGACTCCAATAGAGAGAGAGAGTTCTTCACCTTTAAGTA GTAACCAGTCTGAACCTGGCAGCATCGCTTTAAACTCGTATCACTCCAGAAATTGTTCTGAGAGTGATCA CTCCAGAAATGGTTTTGATACTGATTCCAGCTGTCTGGAATCACATAGCTCCTTATCTGACTCAGAATTT CCCCCAAATAATAAAGGTGAAATAAAAACAGAAGGACAAGAGCTCATAACCGTAATAAAAGCCCCCACCT CCTTTGGTTATGATAAACCACATGTGCTAGTGGATCTACTTGTGGATGATAGCGGTAAAGAGTCCTTGAT TGGTTATAGACCAACAGAAGATTCCAAAGAATTTTCATGA
Translation (479 aa): MLLKSPENSLLQFQFKYGVPTPTNVTIESYNMNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACINI SHHYCNISDHVGDPSNSLWVRVKARVGQKESAYAKSEEFAVCRDGKIGPPKLDIRKEEKQIMIDIFHPSV FVNGDEQEVDYDPETTCYIRVYNVYVRMNGSEIQYKILTQKEDDCDEIQCQLAIPVSSLNSQYCVSAEGV LHVWGVTTEKSKEVCITIFNSSIKGSLWIPVVAALLLFLVLSLVFICFYIKKINPLKEKSIILPKSLISV VRSATLETKPESKYVSLITSYQPFSLEKEVVCEEPLSPATVPGMHTEDNPGKVEHTEELSSITEVVTTEE NIPDVVPGSHLTPIERESSSPLSSNQSEPGSIALNSYHSRNCSESDHSRNGFDTDSSCLESHSSLSDSEF PPNNKGEIKTEGQELITVIKAPTSFGYDKPHVLVDLLVDDSGKESLIGYRPTEDSKEFS
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