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Report for CCDS88083.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
88083.1 |
Public |
Mus musculus |
10 |
Ppp1r12a |
23 |
108 |
98 |
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Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Inferred exon combination |
Sequence IDs included in CCDS 88083.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000219263.1 |
ENSMUSP00000151842.1 |
Accepted |
alive |
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NCBI |
NM_001368736.1 |
NP_001355665.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001355665.1 |
1029 |
Q9DBR7-1 |
1029 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 88083.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3090 nt): ATGAAGATGGCGGACGCGAAGCAGAAGCGGAACGAGCAGCTGAAGCGCTGGATCGGCTCCGAGACGGACC TCGAGCCGCCCGTGGTGAAGCGCCAGAAGACCAAGGTGAAGTTCGACGATGGCGCCGTCTTCCTCGCCGC CTGCTCCAGCGGCGACACGGACGAGGTCCTCAAGCTGCTGCACCGCGGCGCCGACATCAATTACGCCAAT GTGGACGGACTCACCGCCCTGCACCAGGCTTGCATTGATGACAATGTTGATATGGTGAAGTTTCTGGTAG AAAATGGAGCAAATATCAATCAACCTGACAATGAAGGCTGGATACCACTCCATGCAGCTGCTTCCTGTGG ATATCTCGATATTGCAGAGTTTTTGATTGGTCAAGGAGCACATGTAGGAGCTGTCAACAGTGAAGGAGAC ACACCTTTAGATATTGCAGAGGAGGAGGCGATGGAAGAGCTACTTCAAAATGAGGTTAATCGGCAAGGTG TTGATATAGAAGCGGCTCGGAAAGAGGAGGAGCGGGTAATGCTAAGAGACGCGAGGCAGTGGTTAAACAG CGGCCACATCAGTGACGTCCGGCATGCAAAGTCCGGGGGCACAGCACTCCACGTGGCGGCCGCCAAAGGC TATACAGAAGTGTTAAAACTTTTAATACAGGCAGGCTATGATGTTAATATTAAAGATTATGATGGCTGGA CACCTCTTCATGCTGCAGCTCATTGGGGTAAAGAAGAAGCATGTCGGATTTTAGTGGACAATCTGTGTGA TATGGAGACGGTCAACAAAGTGGGCCAAACAGCCTTTGATGTAGCAGATGAAGACATTTTGGGATATCTA GAAGAGTTGCAAAAAAAACAAACTCTGCTCCATAGTGAGAAGCGGGATAAGAAATCTCCACTGATCGAGT CCACAGCAAATATGGAAAACAATCAACCACAGAAGGCTTTTAAAAACAAGGAAACGTTGATTATTGAGCC AGAGAAAAATGCATCTCGCATCGAGTCTCTGGAGCATGAGAAGGCTGATGAGGAGGAAGAAGGCAAGAAG GACGAGTCGAGCTGTTCCAGTGAGGAGGACGAGGAGGACGATTCAGAGTCAGAGGCAGAGACAGATAAGA CAAAGCCCATGGCTTCTGTAAGCAATGCTCATACTTCCAGCACGCAGGCAGCCCCTGCAGCTGTTACAGC ACCTACTCTGTCTTCCAACCAGGGGACCCCTACATCACCTGTTAAAAAGTTTCCAATATCGACTACAAAA ATTTCTCCCAAAGAAGAGGAAAGAAAAGATGAGTCTCCTGCATCCTGGAGGTTAGGGCTTCGAAAGACTG GCAGTTACGGTGCCCTGGCTGAAATCAGTGCGTCTAAAGAAGCCCAGAAGGAGAAAGACACTGCAGGGGT GATGCGGTCGGCTTCCAGTCCGAGACTCTCGTCCTCTTTGGATAATAAAGAAAAGGAGAAAGATAACAAA GGAACGAGACTTGCGTATGTCACCCCTACAATCCCGAGACGACTAGCCAGTACATCTGACATTGAAGAGA AGGAGAACAGAGAGTCTTCAAGTTTGCGAACAAGTAGTTCTTACACAAGAAGAAAATGGGAAGATGATCT TAAAAAGAATAGTTCGATCAATGAAGGATCCACTTACCATAGAAGTTGCTCCTTTGGTAGAAGACAAGAT GATTTGATTAGTTGTAGTGTTCCAAGCACCACATCAACACCAACAGTTACCTCTGCAGCGGGGCTTCAGA GAAGCCTCCCTTCCAGCACAAGCACTGCTGCAAAGACTCCCCCGGGTTCCTCCTCCGCAGGCACACAGAG CAGTACCTCAAATCGTTTGTGGGCTGAGGATAGTACTGAGAAAGAAAAGGACAGTGCTCCTACTGCAGTG ACCATTCCTGTGGCTCCAACTGTTGTAAATGCTGCAGCTCCTTCCACCACCACCCTGACTACAACTACTG CTGGCACTGTTTCCGAGGTCAGGGAGAGACGCAGGTCATACCTCACTCCTGTTAGGGACGAAGAGTCTGA ATCCCAAAGAAAAGCAAGATCTAGACAAGCAAGACAGTCTAGACGGTCAACACAGGGGGTAACACTGACT GATCTTCAGGAAGCTGAAAAAACAATAGGAAGAAGTCGTTCTACGAGAACCAGAGAACAAGAAAATGAAG AGAAAGAAAAAGAAGAAAAGGAAAAGCAGGATAAAGAGAAACAAGAAGAAAAGAAGGAGTCAGAAGCATC TAGAGAAGATGAATATAAACAAAAGTATTCAAGAACATACGATGAGACTTACACACGTTATAGACCTGTG TCAACTTCAAGTTCAAGCGCTCCGTCGTCGTCCTCACTCTCTACTCTAGGCAGCACACTCTATGCCTCAA GTCAGCTCAACAGGCCAAACAGTCTTGTAGGTATAACCTCTGCCTACTCCCGGGGATTAGCCAAAGAAAA CGAGAGAGAGGGAGAGAAAAAAGAAGAGGAGAAAGAAGGGGAAGATAAGTCACAGCCTAAGTCAATCAGA GAACGACGGCGACCCAGAGAAAAGCGACGGTCTACTGGAGTCTCCTTCTGGACACAAGATAGTGATGAAA ATGAGCAAGAGCGGCAATCGGACACTGAGGACGGCTCCAGCAAGAGAGAGACGCAGACGGATTCTGTTTC CAGGTATGACAGCAGTTCCACATCATCAAGTGATCGGTATGATTCCTTGCTGGGTCGCTCTGCTTCATAC AGTTACTTAGAAGACAGAAAACCTTACAGTAGCAGGCTAGAAAAGGATGACTCAACTGACTTCAAAAAGC TTTATGAACAAATTTTAGCTGAAAATGAAAAGCTAAAAGCACAGCTACATGATACAAATATGGAACTAAC GGATCTAAAGTTGCAGTTGGAAAAGGCTACCCAGAGACAAGAACGATTTGCTGACAGGTCACAATTGGAG ATGGAAAAAAGGGAACGAAGAGCTCTAGAAAGAAGAATATCTGAAATGGAAGAAGAGCTCAAAATGTTAC CAGACTTAAAGGCAGACAACCAGAGGCTAAAGGATGAAAATGGAGCCTTGATCAGAGTTATAAGCAAACT TTCCAAGTAG
Translation (1029 aa): MKMADAKQKRNEQLKRWIGSETDLEPPVVKRQKTKVKFDDGAVFLAACSSGDTDEVLKLLHRGADINYAN VDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEFLIGQGAHVGAVNSEGD TPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERVMLRDARQWLNSGHISDVRHAKSGGTALHVAAAKG YTEVLKLLIQAGYDVNIKDYDGWTPLHAAAHWGKEEACRILVDNLCDMETVNKVGQTAFDVADEDILGYL EELQKKQTLLHSEKRDKKSPLIESTANMENNQPQKAFKNKETLIIEPEKNASRIESLEHEKADEEEEGKK DESSCSSEEDEEDDSESEAETDKTKPMASVSNAHTSSTQAAPAAVTAPTLSSNQGTPTSPVKKFPISTTK ISPKEEERKDESPASWRLGLRKTGSYGALAEISASKEAQKEKDTAGVMRSASSPRLSSSLDNKEKEKDNK GTRLAYVTPTIPRRLASTSDIEEKENRESSSLRTSSSYTRRKWEDDLKKNSSINEGSTYHRSCSFGRRQD DLISCSVPSTTSTPTVTSAAGLQRSLPSSTSTAAKTPPGSSSAGTQSSTSNRLWAEDSTEKEKDSAPTAV TIPVAPTVVNAAAPSTTTLTTTTAGTVSEVRERRRSYLTPVRDEESESQRKARSRQARQSRRSTQGVTLT DLQEAEKTIGRSRSTRTREQENEEKEKEEKEKQDKEKQEEKKESEASREDEYKQKYSRTYDETYTRYRPV STSSSSAPSSSSLSTLGSTLYASSQLNRPNSLVGITSAYSRGLAKENEREGEKKEEEKEGEDKSQPKSIR ERRRPREKRRSTGVSFWTQDSDENEQERQSDTEDGSSKRETQTDSVSRYDSSSTSSSDRYDSLLGRSASY SYLEDRKPYSSRLEKDDSTDFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQERFADRSQLE MEKRERRALERRISEMEEELKMLPDLKADNQRLKDENGALIRVISKLSK
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