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Report for CCDS8843.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8843.1 Public Homo sapiens 12 TNS2 24 110 108 CCDS HistoryNCBI Gene:23371Re-query CCDS DB by CCDS ID:8843.1Re-query CCDS DB by GeneID:23371See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8843.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314250.11 ENSP00000319684.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314250.11Link to Ensembl Protein Viewer:ENSP00000319684.7Re-query CCDS DB by Nucleotide ID:ENST00000314250Re-query CCDS DB by Protein ID:ENSP00000319684
Original member Current member NCBI NM_170754.4 NP_736610.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_170754.4Link to Protein Sequence:NP_736610.2Re-query CCDS DB by Nucleotide ID:NM_170754Re-query CCDS DB by Protein ID:NP_736610Link to BLAST:NP_736610.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_736610.2 1409 Q63HR2-1 1409 100% 0 0

Chromosomal Locations for CCDS 8843.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 53050186 53050260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53051855 53051963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53052455 53052492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53053411 53053449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53053774 53053812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53053965 53054014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53054270 53054441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53055186 53055236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53055568 53055690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53055781 53055845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53057013 53057096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53057567 53057679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53057773 53057833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53058027 53058102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53058316 53058445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53058572 53058637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53058714 53058827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53059047 53060258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53060405 53060555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53060675 53061264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53061380 53061469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53061815 53061940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53062153 53062245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53062376 53062453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53062620 53062697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53063089 53063257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53063349 53063417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53063563 53063592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53063744 53063882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4230 nt):
ATGAAGTCCAGCGGCCCTGTGGAGAGGCTGCTCAGAGCCCTGGGGAGGAGGGACAGCAGCCGGGCCGCAA
GCAGGCCTAGGAAAGCTGAGCCTCATAGCTTCCGGGAGAAGGTTTTCCGGAAGAAACCTCCAGTCTGTGC
AGTATGTAAGGTGACCATCGATGGGACAGGCGTTTCGTGCAGAGTCTGCAAGGTGGCGACGCACAGAAAA
TGTGAAGCAAAGGTGACTTCAGCCTGTCAGGCCTTGCCTCCCGTGGAGTTGCGGCGAAACACGGCCCCAG
TCAGGCGCATAGAGCACCTGGGATCCACCAAATCTCTGAACCACTCAAAGCAGCGCAGCACTCTGCCCAG
GAGCTTCAGCCTGGACCCGCTCATGGAGCGGCGCTGGGACTTAGACCTCACCTACGTGACGGAGCGCATC
TTGGCCGCCGCCTTCCCCGCGCGGCCCGATGAACAGCGGCACCGGGGCCACCTGCGCGAGCTGGCCCATG
TGCTGCAATCCAAGCACCGGGACAAGTACCTGCTCTTCAACCTTTCAGAGAAAAGGCATGACCTGACCCG
CTTAAACCCCAAGGTTCAAGACTTCGGCTGGCCTGAGCTGCATGCTCCACCCCTGGACAAGCTGTGCTCC
ATCTGCAAAGCCATGGAGACATGGCTCAGTGCTGACCCACAGCACGTGGTCGTACTATACTGCAAGGGAA
ACAAGGGCAAGCTTGGGGTCATCGTTTCTGCCTACATGCACTACAGCAAGATCTCTGCAGGGGCGGACCA
GGCACTGGCCACTCTTACCATGCGGAAATTCTGCGAGGACAAGGTGGCCACAGAACTGCAGCCCTCCCAG
CGTCGATATATCAGCTACTTCAGTGGGCTGCTATCTGGCTCCATCAGAATGAACAGCAGCCCTCTCTTCC
TGCACTATGTGCTCATCCCCATGCTGCCAGCCTTTGAACCTGGCACAGGCTTCCAGCCCTTCCTTAAAAT
CTACCAGTCCATGCAGCTTGTCTACACATCTGGAGTCTATCACATTGCAGGCCCTGGTCCCCAGCAGCTT
TGCATCAGCCTGGAGCCAGCCCTCCTCCTCAAAGGCGATGTCATGGTAACATGTTATCACAAGGGTGGCC
GGGGCACAGACCGGACCCTCGTGTTCCGAGTCCAGTTCCACACCTGCACCATCCACGGACCACAGCTCAC
TTTCCCCAAGGACCAGCTTGACGAGGCCTGGACTGATGAGAGGTTCCCCTTCCAAGCCTCCGTGGAGTTT
GTCTTCTCCTCCAGCCCCGAGAAGATCAAAGGCAGCACTCCACGGAACGACCCCTCGGTCTCTGTCGACT
ACAACACCACTGAGCCAGCCGTGCGCTGGGACTCCTATGAGAACTTCAACCAGCACCACGAGGACAGTGT
GGATGGCTCCTTGACCCACACCCGGGGTCCCCTGGATGGCAGTCCTTATGCCCAGGTGCAGCGGCCTCCC
CGGCAGACCCCCCCGGCACCCTCTCCAGAGCCTCCACCACCCCCCATGCTCTCTGTCAGCAGCGACTCAG
GCCATTCCTCCACGCTGACCACAGAGCCGGCTGCTGAGTCCCCTGGCCGGCCGCCCCCTACAGCTGCTGA
ACGGCAGGAGCTGGATCGCCTCCTAGGAGGCTGCGGAGTGGCCAGTGGGGGCCGGGGAGCTGGGCGCGAG
ACGGCCATCCTAGATGACGAAGAGCAGCCCACTGTGGGCGGAGGCCCCCACCTCGGAGTGTATCCAGGCC
ATAGGCCTGGCCTCAGCCGCCACTGCTCCTGCCGCCAGGGCTACCGGGAGCCCTGCGGGGTTCCCAATGG
GGGCTACTACCGGCCAGAGGGAACCCTGGAGAGGAGGCGACTGGCCTACGGGGGCTATGAGGGATCCCCC
CAGGGCTACGCCGAGGCCTCGATGGAGAAGAGGCGCCTCTGCCGATCGCTGTCAGAGGGGCTATACCCCT
ACCCACCTGAGATGGGGAAACCAGCCACTGGGGACTTTGGCTACCGCGCCCCAGGCTACCGGGAGGTGGT
CATCCTGGAGGACCCTGGGCTGCCTGCCCTATACCCATGCCCAGCCTGCGAGGAGAAGCTGGCGCTGCCT
ACAGCAGCCTTGTATGGACTGCGGCTGGAGAGGGAGGCTGGAGAAGGGTGGGCAAGTGAGGCTGGCAAGC
CTCTCCTGCACCCAGTGCGGCCTGGGCACCCGCTGCCTCTGCTCTTGCCTGCCTGTGGGCATCACCATGC
CCCGATGCCTGACTACAGCTGCCTGAAGCCACCCAAGGCAGGCGAGGAAGGGCACGAGGGCTGCTCCTAC
ACCATGTGCCCCGAAGGCAGGTATGGGCATCCAGGGTACCCTGCCCTGGTGACATACAGCTATGGAGGAG
CAGTTCCCAGTTACTGCCCAGCATATGGCCGTGTGCCTCATAGCTGTGGCTCTCCAGGAGAGGGCAGAGG
GTATCCCAGCCCTGGTGCCCACTCCCCACGGGCTGGCTCCATTTCCCCGGGCAGCCCGCCCTATCCACAA
TCTAGGAAGCTGAGCTACGAGATCCCTACGGAGGAGGGAGGGGACAGGTACCCATTGCCTGGGCACCTGG
CCTCAGCAGGACCTTTGGCATCTGCAGAGTCGCTGGAGCCGGTGTCCTGGAGGGAGGGCCCCAGTGGGCA
CAGCACACTGCCTCGGTCTCCCCGAGATGCCCCATGCAGTGCTTCGTCAGAGTTGTCTGGTCCCTCCACG
CCCCTGCACACCAGCAGTCCAGTCCAGGGCAAGGAAAGCACCCGGCGACAGGACACCAGGTCCCCCACCT
CAGCGCCCACTCAGAGACTGAGTCCTGGCGAGGCCTTGCCCCCTGTTTCCCAGGCAGGCACCGGAAAGGC
CCCTGAGCTGCCGTCGGGAAGTGGGCCTGAGCCTCTGGCCCCTAGCCCAGTCTCTCCGACCTTCCCTCCC
AGCTCGCCCAGTGACTGGCCTCAGGAAAGGAGTCCAGGGGGCCACTCAGATGGCGCCAGTCCTCGGAGCC
CTGTGCCCACCACACTTCCTGGCCTCCGCCACGCCCCCTGGCAAGGCCCTCGAGGCCCCCCCGACAGCCC
AGATGGGTCTCCCCTCACTCCTGTGCCTTCCCAGATGCCCTGGCTTGTGGCCAGCCCAGAGCCGCCTCAG
AGCTCACCTACACCTGCTTTCCCCCTGGCTGCCTCCTATGACACCAATGGCCTTAGCCAGCCCCCACTTC
CTGAGAAACGCCACCTGCCCGGGCCGGGGCAACAGCCAGGACCCTGGGGCCCAGAGCAGGCATCATCGCC
AGCCAGAGGCATCAGTCACCATGTCACCTTCGCACCTCTGCTCTCAGATAATGTCCCCCAAACCCCAGAG
CCTCCTACACAAGAGAGCCAAAGCAATGTCAAGTTTGTCCAGGATACATCCAAGTTCTGGTACAAGCCAC
ACCTGTCCCGTGACCAAGCCATTGCCCTGCTGAAGGACAAGGACCCTGGGGCCTTCCTGATCAGGGACAG
TCATTCATTCCAAGGAGCTTATGGGCTGGCCCTCAAGGTGGCCACACCGCCACCCAGTGCCCAGCCCTGG
AAAGGGGACCCCGTGGAACAGCTGGTCCGCCATTTCCTCATCGAGACTGGGCCCAAAGGGGTGAAGATCA
AGGGCTGCCCCAGTGAGCCCTACTTTGGCAGCCTGTCCGCCTTGGTCTCCCAGCACTCCATCTCCCCCAT
CTCCCTGCCCTGCTGCCTGCGCATTCCCAGCAAAGATCCTCTGGAAGAGACCCCAGAGGCTCCAGTGCCC
ACCAACATGAGCACAGCGGCAGACCTCCTGCGTCAGGGTGCTGCCTGCAGCGTGCTCTACTTGACCTCAG
TGGAGACAGAGTCACTGACGGGCCCCCAAGCTGTGGCCCGGGCCAGCTCTGCAGCTCTGAGCTGTAGCCC
CCGCCCGACACCAGCTGTTGTCCACTTCAAGGTGTCAGCCCAGGGCATTACACTGACGGACAACCAAAGG
AAGCTCTTCTTTCGCCGCCATTATCCAGTGAACAGCATCACCTTCTCCAGCACTGACCCTCAAGACCGGA
GATGGACCAACCCAGACGGGACCACCTCCAAGATCTTTGGTTTCGTGGCCAAGAAGCCGGGAAGCCCCTG
GGAGAATGTGTGTCACCTCTTTGCAGAGCTTGACCCAGATCAGCCTGCTGGCGCCATTGTCACCTTCATC
ACCAAAGTTCTACTGGGCCAGAGAAAATGA

Translation (1409 aa):
MKSSGPVERLLRALGRRDSSRAASRPRKAEPHSFREKVFRKKPPVCAVCKVTIDGTGVSCRVCKVATHRK
CEAKVTSACQALPPVELRRNTAPVRRIEHLGSTKSLNHSKQRSTLPRSFSLDPLMERRWDLDLTYVTERI
LAAAFPARPDEQRHRGHLRELAHVLQSKHRDKYLLFNLSEKRHDLTRLNPKVQDFGWPELHAPPLDKLCS
ICKAMETWLSADPQHVVVLYCKGNKGKLGVIVSAYMHYSKISAGADQALATLTMRKFCEDKVATELQPSQ
RRYISYFSGLLSGSIRMNSSPLFLHYVLIPMLPAFEPGTGFQPFLKIYQSMQLVYTSGVYHIAGPGPQQL
CISLEPALLLKGDVMVTCYHKGGRGTDRTLVFRVQFHTCTIHGPQLTFPKDQLDEAWTDERFPFQASVEF
VFSSSPEKIKGSTPRNDPSVSVDYNTTEPAVRWDSYENFNQHHEDSVDGSLTHTRGPLDGSPYAQVQRPP
RQTPPAPSPEPPPPPMLSVSSDSGHSSTLTTEPAAESPGRPPPTAAERQELDRLLGGCGVASGGRGAGRE
TAILDDEEQPTVGGGPHLGVYPGHRPGLSRHCSCRQGYREPCGVPNGGYYRPEGTLERRRLAYGGYEGSP
QGYAEASMEKRRLCRSLSEGLYPYPPEMGKPATGDFGYRAPGYREVVILEDPGLPALYPCPACEEKLALP
TAALYGLRLEREAGEGWASEAGKPLLHPVRPGHPLPLLLPACGHHHAPMPDYSCLKPPKAGEEGHEGCSY
TMCPEGRYGHPGYPALVTYSYGGAVPSYCPAYGRVPHSCGSPGEGRGYPSPGAHSPRAGSISPGSPPYPQ
SRKLSYEIPTEEGGDRYPLPGHLASAGPLASAESLEPVSWREGPSGHSTLPRSPRDAPCSASSELSGPST
PLHTSSPVQGKESTRRQDTRSPTSAPTQRLSPGEALPPVSQAGTGKAPELPSGSGPEPLAPSPVSPTFPP
SSPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPPDSPDGSPLTPVPSQMPWLVASPEPPQ
SSPTPAFPLAASYDTNGLSQPPLPEKRHLPGPGQQPGPWGPEQASSPARGISHHVTFAPLLSDNVPQTPE
PPTQESQSNVKFVQDTSKFWYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPW
KGDPVEQLVRHFLIETGPKGVKIKGCPSEPYFGSLSALVSQHSISPISLPCCLRIPSKDPLEETPEAPVP
TNMSTAADLLRQGAACSVLYLTSVETESLTGPQAVARASSAALSCSPRPTPAVVHFKVSAQGITLTDNQR
KLFFRRHYPVNSITFSSTDPQDRRWTNPDGTTSKIFGFVAKKPGSPWENVCHLFAELDPDQPAGAIVTFI
TKVLLGQRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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