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Report for CCDS88506.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88506.1 Public Mus musculus 13 Ankra2 23 108 98 CCDS HistoryNCBI Gene:68558Re-query CCDS DB by CCDS ID:88506.1Re-query CCDS DB by GeneID:68558See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88506.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000226100.1 ENSMUSP00000153417.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000226100.1Link to Ensembl Protein Viewer:ENSMUSP00000153417.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000226100Re-query CCDS DB by Protein ID:ENSMUSP00000153417
Original member Current member NCBI NM_001271391.1 NP_001258320.1 Accepted alive Link to Nucleotide Sequence:NM_001271391.1Link to Protein Sequence:NP_001258320.1Re-query CCDS DB by Nucleotide ID:NM_001271391Re-query CCDS DB by Protein ID:NP_001258320Link to BLAST:NP_001258320.1

Chromosomal Locations for CCDS 88506.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 98268465 98268495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98271055 98271152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98271654 98271779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98272226 98272292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98272772 98272852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98273378 98273433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGCTCTACCTGGCTACTCGTATTGAACAAGAAAATGTTATCAATCACACGGATGAAGAAGGATTTACCC
CCCTGATGTGGGCTGCGGCACATGGGCAAATAGCTGTGGTAGAGTTCCTTCTTCAGAATGGTGCAGATCC
CCAGCTTCTAGGAAAAGGTCGAGAAAGTGCTCTGTCTCTTGCCTGTAGCAAGGGCTACACAGACATTGTC
AAAATGCTGCTTGACTGTGGAGTTGACGTCAATGAATATGACTGGAACGGAGGGACACCTTTGCTTTACG
CTGTCCATGGGAACCACGTGAAGTGCGTGAAGATGCTGTTGGAAAATGGAGCTGACCCAACAATTGAAAC
AGACTCTGGCTATAATTCTATGGACCTAGCTGTAGCTTTGGGCTACAGAGGTGTCCAACAGGCCATCGAG
TCCCATCTGCTGAAACTCCTTCAGAACATCAGGGAGTGA

Translation (152 aa):
MLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIV
KMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLENGADPTIETDSGYNSMDLAVALGYRGVQQAIE
SHLLKLLQNIRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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