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Report for CCDS88777.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88777.1 Public Mus musculus 15 Mroh5 23 108 98 CCDS HistoryNCBI Gene:268816Re-query CCDS DB by CCDS ID:88777.1Re-query CCDS DB by GeneID:268816See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 88777.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000110021.2 ENSMUSP00000105648.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110021.2Link to Ensembl Protein Viewer:ENSMUSP00000105648.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000110021Re-query CCDS DB by Protein ID:ENSMUSP00000105648
Original member Current member NCBI NM_001368162.1 NP_001355091.1 Accepted alive Link to Nucleotide Sequence:NM_001368162.1Link to Protein Sequence:NP_001355091.1Re-query CCDS DB by Nucleotide ID:NM_001368162Re-query CCDS DB by Protein ID:NP_001355091Link to BLAST:NP_001355091.1

Chromosomal Locations for CCDS 88777.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 73787706 73788033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73789219 73789298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73789970 73790092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73790720 73790878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73791724 73791843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73792669 73792785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73793068 73793175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73798880 73798932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73800092 73800251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73819284 73819319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1284 nt):
ATGCAGCTGGCCCTGGAGCACATGACCAAGTCCACGGAACTGAATGATATATATCAAGATGCAGCCAGCA
ATGTGTTGCTGGCCGTCTGTCGGCACTCATGGCCGGCAGTGGCCAAGCACTTGGAGACGGAGCTCCTGAC
GGGTGTCTTCCCACACCGCAGCCTGTTGTATGTGATGGGAGTCCTAATATCTCAAGAGGAGCTTCTCAAG
GAAGAAGACAGAGCAAGCTGGAAAGATTTGCTTTCCCAGATGGCCAGAAAGTCGGTGCCGTTCCTGAACA
CAGATGTGTGGTCCAAGGAGTTGCTGTGGGCCATCACCAAGTCTGGCAGAACACAGCAAGAGCAAACCCC
GGACAAGGCCTTCCTGTTCACCTACTACGGGCTAATCCTTCAAGCTGAGGAGAACAGCACCACCGTCAGG
ACGCATCTCACAACCCTCTTGGAGACATCTCACCAGTGGGCCAAGCAAAGGGAGGGCATTGCTCTCACAG
TGGGACTGGTTGCAGTAAACCACTTGGATGATGCCTGGGCTATCTTAGAACAGTTTGGACGGAGCACACC
CTTCAAGAGGAGCCTGCAGAACTTTTCCCTGAAGCTCCACGGCCAGAACACTGAGGACCTTCGGTGGAAG
TGGGCCAGCAGCACCATCCTCCTCTCCTACGGCCAGATGGCAGCCTGGGCCAAGAACCACATCCTGCCCT
GGGTGGACAACATCTTATCCAGGATGATCTTCTACTTCCACTTCAGCTCCTGGGATGAGACCCTGAAGCA
AAGCTTCCTTACTGCTATCACGATGCTGGTGGGAGCCATCAGCCGGAACGAAGGTGCCCACAGCTACGAG
TTCTCCCAGACTAGTGAGCTCCTGGAGTGTCTGATGACACTGATGGAGAAAGAGCCGCAAGACACACTGG
TCACCAGCATCCGCCAGCAGGCCATCCATATTGTCTCCAGCCTCTGTGCGCTGAGGCCGCCCATGGATGT
GAACAGGAAACCCCGCCTCCTCTCCACCTGCTTCCGCAGCATCTTTACCCTGCCTCAGCTGGATGACCTG
GAGAAGCAGGCCTGCCTCCTCACGGAACCACCCAACATCAACATCCAGGTGCGGCCTGCACTTAAGCCCG
GGAGACTCTGGCAGGACATCAGGCTCAGTCCACTGTGTGTGGCTGAATGGAGAGCCAACGCTGGCCACTC
CGCAGGCAGAGTGGAGGCCCTGGGTAGTTGCCTAAAGGCTCTGGGTCTCCATTTGCCTCCCTGGGACACG
GTCCATGATCACTTTGGGCCATGA

Translation (427 aa):
MQLALEHMTKSTELNDIYQDAASNVLLAVCRHSWPAVAKHLETELLTGVFPHRSLLYVMGVLISQEELLK
EEDRASWKDLLSQMARKSVPFLNTDVWSKELLWAITKSGRTQQEQTPDKAFLFTYYGLILQAEENSTTVR
THLTTLLETSHQWAKQREGIALTVGLVAVNHLDDAWAILEQFGRSTPFKRSLQNFSLKLHGQNTEDLRWK
WASSTILLSYGQMAAWAKNHILPWVDNILSRMIFYFHFSSWDETLKQSFLTAITMLVGAISRNEGAHSYE
FSQTSELLECLMTLMEKEPQDTLVTSIRQQAIHIVSSLCALRPPMDVNRKPRLLSTCFRSIFTLPQLDDL
EKQACLLTEPPNINIQVRPALKPGRLWQDIRLSPLCVAEWRANAGHSAGRVEALGSCLKALGLHLPPWDT
VHDHFGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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