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Report for CCDS89117.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
89117.1 |
Public |
Mus musculus |
17 |
Tbc1d5 |
23 |
108 |
98 |
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Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 89117.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000224528.1 |
ENSMUSP00000153172.1 |
Accepted |
alive |
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NCBI |
NM_001285991.1 |
NP_001272920.1 |
Accepted |
alive |
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Chromosomal Locations for CCDS 89117.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2514 nt): ATGTATAAGTCTGTGTCTGAAACGAGACATCCTCTGCAGTCAGAAGAACAAGAAGTAGGCATTGACCCCT TGTTCAGTTATTCAAATAAAACAAGAGGAGATCTAAGTCAAAATGGAAGAGGATCAAATTCTACCTTAGA CACTGAAGGGACGTTCAATTCATATATGAAAGAATGGGAAGAACTATTTGTAAACAACAATTACTTGGCA ACAGTAAGACAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTCT TTCTTTGTGTTCTTCCTCAAGATAAAAGTCAGTGGATAAGTAAAATCAAAGAACTAAGAGCCTGGTATAG CAGTATTAAAGAAATACACATCACTAACCCAAGGAAGGCTGCCGGCCAGCAGGATCTGATGATCAACAAC CCCCTATCACAGGATGAAGGAAGTCTTTGGAACAAGTTCTTTCAAGATAAAGAACTACGGTCCATGATTG AGCAAGATGTCAAAAGAACGTTTCCTGAAATGCAGTTTTTCCAACAAGAAAATGTGAGAAAAATTCTTAC AGATGTTCTGTTCTGCTATGCAAGAGAGAACGAGCAGTTGCTTTACAAACAGGGTATGCATGAGCTACTA GCGCCTATCATCTTTACCCTCCACTGTGACCACCAAGCTTTTCTACATGCCAGCGAGTCTGCACAGCCCA GTGAGGAAATGAAAACTCTCCTGAACCCTGAGTATCTGGAGCATGATGCCTATGCAATGTTCTCACAGCT TATGGAAACTGCTGAACCTTGGTTTTCTACGTTTGAGCATGATGGTCAAAAGGGAAAAGAAACTCTGATG GCCCCCATTCCCTTTGCTCGACCACAGGATTTAGGGCCAACAGTTGCCATTGTTACAAAAGTCAACCAGA TCCAGGACCATCTACTGAAGAAACATGATATTGAGCTCTACATGCACCTGAACAGACTAGAAATTGCACC ACAAATATATGGGTTACGATGGGTGCGGCTGCTGTTTGGCAGAGAGTTCCCTCTGCAGGACCTGCTGGTG GTCTGGGATGCCCTGTTTGCGGATAGCCTCAACCTGAGCTTAGTCGACTATGTCTTCACAGCCATGCTAC TCTATATCCGAGATGCTTTGATTTCTAGTAACTATCAGACCTGTCTTGGCCTTCTGATGCATTATCCAAT CATCGGGGACATACACTCACTGATACTGAAGGCTCTGTTCCTTAGAGACCCAAAGAGAAATCCAAGGCCG GCGACTTACCAGTTCCACCCCAACTTAGACTACTACAAAGCACGGGGAGCCGACCTTATGAACAAAAGCC GGACCAATGCCAGAGGTGCTCCCCTGAATATACACAAGGTCTCCAACAGCTTGATTAACTTTGGAAGAAA GCTGATTTCCCCAGCCTCAGCTCCGGGCAGTATGGGTGGCCCTGTACCCGGAAACAACAGCAGCAGTTCC TTCTCTGCTGCCATCCCCACCAGGACCTCCACAGAAGCCCCAAGGCATCATTTGCTGCAGCAGCAACAGC AGCAGCAGCACCAGCAGCAGCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAACACCAGCAGCAACAGCA GCAGCAGAGACTGATGAAATCTGAAAGCATGCCGGTACAGTTGAACAAAGGCGACGTAGTTACAGGAAGC GATGCTCAGGTTTCTGTTCCTGTCCAGGCTCTAACTGACCTCCAAGGGCAAAGTTCGAAAACCATCAGTT CATCTCCAAGTATCGAGAGTTTGCCTGGGGGAAGAGAATTCACTGGCTCTCCACCTCCATCCGCTACTAA AAAGGATTCCTTTTTCAGCAACATCGCACGTTCCCGTTCACACAGCAAAACCATGGGCAGGAAAGAGTCT GAAGAAGAACTAGAGGCTCAGATCTCCTTCCTACAAGGCCAGCTGAATGACCTGGATGCCATGTGCAAGT ACTGTGCAAAGGTCATGGACATGCATCTTGTAAACATTCAAGATGTGGTATTACAAGAGAATTTGGAAAA AGAAGATCAAATTCTGGTGTCCTTGGCAGGATTAAAACAGATCAAAGACATTCTGAAAGGTTCCCTGCGC TTCAACCAGAGCCAGCTGGAGGCTGGCGAGAATGAGCAGATTACCATCGCTGATGACCACTACTGCTCCA GTGGCCAGGACCAGGGCAGCCAAGTTCCTAGGGCCGCCAAGCAGGCCTCTTCAGAGATGCCAGGGTGCAC CGGTGGAACGACCCCAGATGACTTCATTCTGGTTTCCAAAGAAGATGAGGGGCACCGTGCCAGGGGGGCC TTCTCAGGCCAGGCCCAGCCTCTTCTCACCCTCAGAAGCACATCTGGGAAAAGCCGAGCCCCAGCCTGCT CCCCACTGCTGTTCTCAGACCCACTGATGGGCCCAGCCTCAGCCTCAGCCTCCTCCAGCAACCCCAGCTC CAGCCCCGATGATGACAGCAGCAAGGAGTCTGGCTTCACCATTGTGAGCCCCTTGGACATCTGA
Translation (837 aa): MYKSVSETRHPLQSEEQEVGIDPLFSYSNKTRGDLSQNGRGSNSTLDTEGTFNSYMKEWEELFVNNNYLA TVRQKGINGQLRSSRFRSICWKLFLCVLPQDKSQWISKIKELRAWYSSIKEIHITNPRKAAGQQDLMINN PLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEMQFFQQENVRKILTDVLFCYARENEQLLYKQGMHELL APIIFTLHCDHQAFLHASESAQPSEEMKTLLNPEYLEHDAYAMFSQLMETAEPWFSTFEHDGQKGKETLM APIPFARPQDLGPTVAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLV VWDALFADSLNLSLVDYVFTAMLLYIRDALISSNYQTCLGLLMHYPIIGDIHSLILKALFLRDPKRNPRP ATYQFHPNLDYYKARGADLMNKSRTNARGAPLNIHKVSNSLINFGRKLISPASAPGSMGGPVPGNNSSSS FSAAIPTRTSTEAPRHHLLQQQQQQQHQQQQQQQPQQQQQQHQQQQQQQRLMKSESMPVQLNKGDVVTGS DAQVSVPVQALTDLQGQSSKTISSSPSIESLPGGREFTGSPPPSATKKDSFFSNIARSRSHSKTMGRKES EEELEAQISFLQGQLNDLDAMCKYCAKVMDMHLVNIQDVVLQENLEKEDQILVSLAGLKQIKDILKGSLR FNQSQLEAGENEQITIADDHYCSSGQDQGSQVPRAAKQASSEMPGCTGGTTPDDFILVSKEDEGHRARGA FSGQAQPLLTLRSTSGKSRAPACSPLLFSDPLMGPASASASSSNPSSSPDDDSSKESGFTIVSPLDI
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