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Report for CCDS89386.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
89386.1 |
Public |
Mus musculus |
19 |
Myof |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:226101](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:89386.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:226101](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 89386.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000226068.1 |
ENSMUSP00000153225.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000226068.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000153225.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000226068](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000153225](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001302140.1 |
NP_001289069.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001302140.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001289069.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001302140](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001289069](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001289069.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 89386.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6186 nt): ATGCTTCGAGTGATTGTGGAATCTGCCACTAACATCCCTAAAACAAAATTTGGGAAGCCGGATCCTATCG TTTCTGTCATTTTTAAGGATGAGAAAAAGAAAACAAAGAAAGTTGATAATGAACTCAACCCTGTCTGGAA TGAGATTTTGGAATTTGACTTGAGGGGGATACCACTGGACTCTTCATCCTCCCTGGTGATTGTTGTCAAA GATTTTGAGACAATTGGACAAAATAAATTAATTGGCACAGCAACTGTCTCCCTGAAGGACCTGATTGGGG ACCAGAACAGGTCTTTGCCCTACAAACAGACCTCCCTGCTAAATGAAAAGGGACAAGACACTGGGGCCAC CATTGACCTGGTGATCGGCTATACCCCACCTTCAGCTCCACATCCAAATGATCCGAGCGGGACCAGTGTG CCAGGCATGGGAGAAGAAGAGGAAGAAGATCAAGGAGATGAAGACAGGGTAGATGGCATAGTCAGAGGCC CTGGGCCCAAGGGGCCATCTGGGACAGTGTCAGAAGCTCAGCTGGCTCGGAGGATCACCAAAGGGAAGAG CAGCCGAAGGATGCTGTCCAACAAGCCACAGGATTTCCAGATCCGTGTCAGAGTGATCGAGGGCCGTCAG TTATGCGGCAACAACATAAGGCCCGTGGTGAAAGTTCACATCTGTGGTCAGACGCACCGCACGAGAATCA AGAGAGGGAACAATCCGTTTTTTGACGAGTTATTTTTCTACAATGTGCACATCACACCCTCTGAGCTCAT GGATGAGATCATCAGTATCCGGGTTTATAATTCCCATTCTTTGAGGGCAGATTGTCTGATGGGGGAATTT AAGATTGATGTTGGATTTGTTTATGATGAACCTGGCCACGCTGTCATGAGGAAATGGCTCCTTCTCAATG ACCCAGAAGACACCAGCTCAGGCGCAAAAGGTTACATGAAAGTCAGCATGTTTGTCCTGGGAACCGGAGA CGAACCCCCTCCTGAGAAACGAGACCGTGACAATGACAGTGATGACGTGGAGAGCAACTTGTTACTTCCG GCAGGCATTGCCCTCCGGTGGGTGACCTTCATGCTGAAGATCTACCGAGCCGAGGACATCCCCCAGATGG ATGATGCCTTCTCACAAACAGTGAAGGAAATATTTGGTGGCAACGCAGATAAAAAAAATCTTGTGGATCC TTTTGTAGAAGTCTCCTTTGCTGGGAAAAAGGTGTGCACAAATATAATTGAGCGGAATGCAAACCCTGAA TGGAATCAAGTTGTCAACCTTCAGATCAAGTTTCCCTCCATGTGTGAAAAAATAAAACTAACAGTATATG ACTGGGACCGGCTTACTAAAAATGATGTAGTTGGGACCACGTACCTGTACCTCTCTAAAATTGCTGCCTC TGGGGGAGAAGTGGAAGATTTCTCATCCTCGGGAGCTGGGGCTGCATCATATACAGCAACTACAGGAGAG ACAGAGGTGGGGTTTGTCCCAACATTCGGACCTTGTTATTTGAACCTTTACGGAAGCCCCAGAGAGTACA CAGGATTTCCAGATCCCTATGATGAGCTCAACTCAGGAAAGGGAGAAGGGGTGGCCTACAGAGGCAGGAT CTTCGTGGAACTGAACACGTTCCTTGAAAAGAAACCACCAGAAAAGAAGCTGGAGCCCATTTCCAGTGAT GACCTTCTGGTTGTTGAGAAGTACCAGCGAAGGCGGAAGTATAGCCTGTCCGCCGTGTTCCATTCAGCCA CCATGTTGCAAGATGTTGGTGAGGCCATTCAGTTTGAAGTCAGCATTGGGAACTATGGCAACAAGTTTGA TGCAACCTGTAAACCTTTGGCATCAACCACTCAATACAGCCGTGCAGTATTTGACGGGAACTACTATTAC TACTTACCTTGGGCCCACACGAAGCCCGTGGTCACCCTGACTTCCTACTGGGAGGATATTAGTCACCGCC TGGATGCAGTGAACACTCTCCTAGTCATGGCAGAACGGCTGCAATCAAACATAGAGGCTGTAAAATCAGG GATCCAGGGTAAAATTCCTGCAAACCAGTTGGCGGAGGTGTGGCTGAAGCTGATAGATGAAGTTATAGAA GACACGAGATACACCTTGCCTGTCACAGAAGGAAAAGCCAACGTCACGGTTCTGGATACTCAGATCCGAA AGTTGCGGTCCAGGTTTCTCTCCCAGATACACGAGGCAGCTCTGAGGATGAGATCTGAAGCCACGGATGT GAAATCCACCTTGTTGGAAATCGAGGAGTGGCTTGATAAACTGATGCAGCTTACTGAAGAGCCTCAGAAC AGCATGCCTGACATCATCATCTGGATGATCCGTGGAGAGAAAAGACTGGCTTATGCACGAATCCCTGCCC ACCAAGTCTTGTACTCCACCAGCGGTGGGAACGCCTCTGGAAAATACTGTGGGAAAACCCAAACCATCCT TCTGAAGTATCCACAAGAAAAAACCAATGGGCCCAAAGTGCCTGTGGAGCTGCGCGTGAACATCTGGCTG GGTTTAAGTGCTGTGGAAAAGAAGTTCAATAGCTTCGCGGAAGGCACCTTCACCGTCTTTGCTGAAATGT ATGAAAACCAAGCCCTTGTGTTTGGGAAGTGGGGCACCTCTGGACTGGTGGGACGCCATAAATTCTCTGA TGTCACAGGAAAAATAAAACTCAAGAGAGAATTCTTTTTACCTCCCAAAGGCTGGGAGTGGGAAGGAGAC TGGGTGGTTGACCCTGAACGAAGCCTCCTGACTGAGGCTGACGCAGGTCACACCGAGTTCACTGATGAAG TCTACCAGAATGAGAATCGCTACCCCGGAGGCGAGTGGAAGCAGGCAGAGGACACCTATACGGATGCGAA TGGAGATAAGGCGGCATCACCCAGTGAGATGACCTGCCCTCCAGGTTGGGAGTGGGAGGATGACGCATGG ATATATGACATAAATCGAGCAGTGGATGAGAAAGGCTGGGAGTATGGGATTACCATTCCTCCTGATAATA AGCCCAAATCCTGGGTTGCAGCAGAAAAGATGTATCACACTCACAGGCGGCGGAGACTGGTCCGGAAACG CAAGAAAGATCTGACACAGACGGCTTCTAGTACCGCAAGGGCCATGGAAGAACTTGAAGACCGGGAGGGC TGGGAATATGCTTCGTTAATCGGCTGGAAATTCCACTGGAAACAGCGCAGTTCAGACACCTTTCGCCGCA GGCGCTGGAGGAGGAAAATGGCCCCTTCTGAGACACACGGTGCCGCTGCCATCTTTAAACTCGAAGGTGC CCTTGGGGCAGACACCACAGAGGATGGAGAAGAGAAGGGCCCGGAGAAGCAGAAGCACAGCGCCACCACT GTGTTTGGAGCAAACACGCCCATTGTTTCCTGTAATTTCGACAGAGTCTACATCTACCACCTGCGCTGCT ACATTTATCAAGCCAGGAACCTCATGGCTTTGGACAAAGACAGCTTTTCAGATCCATACGCCCATGTCTC CTTCCTCCATCGAAGCAAAACCACTGAGATCATCCACTCCACCCTGAATCCCACCTGGGACCAAACCATT ATATTCGATGAGGTTGAAATCTTTGGGGAACCCCAAACAGTTCTACAGAACCCACCCAACGTTACCATAG AACTTTTTGACAATGACCAAGTGGGCAAAGATGAATTTTTAGGTCGAAGCATTTGCTCTCCCTTGGTGAA ACTGAACTCAGAAACGGACATCACACCTAAGCTTCTCTGGCATCCTGTTATGAATGGAGACAAGGCCTGT GGGGATGTCCTCGTAACAGCAGAGTTGATTCTGAGGAACAAGGATGGCTCCAACCTTCCCATCCTCCCCT CTCAAAGAGCACCAAACTTATACATGGTCCCTCAGGGGATCAGGCCTGTGGTTCAGCTCACTGCCATTGA GATCCTAGCTTGGGGCTTAAGAAATATGAAAAACTACCAGATGGCTTCTGTCACATCACCCAGCCTGGTG GTGGAATGCGGAGGAGAGAGAGTAGAATCGGTGGTGATCAAAAGCCTTAAGAAGACACCCAACTTCCCAA GTTCTGTTCTCTTCATGAAAGTGTTCTTGCCCAAGGAAGAATTGTACATGCCTCCGCTGGTGATCAAGGT CATTGATCACAGGCAGTTTGGGCGGAAGCCTGTGGTTGGCCAATGCACCATTGACCACCTGGACCGCTTT CGGTGTGATCCATATGCAGGAAAGGAGGATATTGTACCACAACTAAAAGCCTCTCTGATGTCTGCACCTC CATGCCGGGAAGTCGTTATTGAAATAGAAGACACCAAACCATTACTGGCTTCTAAGCTGTCGGAAAAGGA GGAAGAAATCGTTGACTGGTGGAGTAAATTTTATGCTTCCTCTGGAGAGCATGAAAAATGTGGACAGTAT ATTCAGAAAGGCTATTCCAAACTCAAGATCTATGACTGTGAACTGGAGGATGTAGCCGACTTTGAAGGCC TGACAGATTTCTCAGATACCTTCAAGCTGTACAGAGGCAAGTCCGATGAGAATGAAGATCCATCTGTGGT AGGAGAGTTTAAAGGCTCCTTCCGAATCTACCCCTTGCCGGATGACCCCAGTGTGCCAGCCCCTCCCAGG CAGTTTCGGGAACTGCCTGACAGTGTCCCACAGGAATGCACTGTTAGGATTTACATTGTTCAAGGCTTAC AGCTCCAGCCTCAGGACAACAATGGCCTGTGTGATCCTTACATAAAAATAACCTTGGGCAAGAAAGTAAT TGAAGACCGAGACCACTACATTCCCAACACTCTCAACCCAGTGTTTGGCAGAATGTACGAACTGAGCTGC TACTTGCCTCAAGAGAAAGACCTGAAGATCTCTGTCTATGACTACGATACCTTCACCCGAGATGAGAAGG TGGGAGAGACAACCATTGACCTGGAGAACCGCTTCCTTTCCCGGTTCGGGTCTCACTGCGGAATCCCTGA GCAGTACTGTGTTTCCGGAGTAAATACCTGGCGAGATCAGCTGAGACCAACGCAGTTGCTTCAAAACGTT GCAAGATTCAAAGGCTTCCCGCCACCAGTTCTTTCTGAAGACGGAAGCAGAATCCGATACGGAGGTCGAG ACTACCATTTGGATGAGTTTGAGGCCAACAAAATCCTGCACCAGCACCTTGGAGCCCCCGAAGAGCGTCT TGCCCTCCATATTCTCAGGACTCAGGGGCTGGTCCCTGAGCACGTGGAGACAAGGACTTTGCACAGCACC TTCCAGCCCAATATTTCCCAGGGGAAACTTCAGATGTGGGTGGATGTCTTCCCCAAGAGTTTAGGACCAC CAGGCCCCCCTTTCAACATCACACCCAGGAAAGCCAAGAAGTACTACCTGCGTGTGATCATCTGGAATAC CAAGGACGTTATCTTGGATGAGAAGAGCATCACTGGGGAGGACATGAGTGACATCTACGTCAAAGGCTGG ATTTCCGGCAGCGAAGAAAACAAACAGAAAACAGATGTCCACTACAGGTCCTTGGATGGTGAAGGCAATT TTAACTGGAGATTTGTTTTCCCATTTGACTACCTCCCTGCTGAGCAGCTCTGTATAGTCGCTAAAAAAGA GCATTTCTGGAGTATTGATCAAACAGAATTTCGAGTCCCTCCTCGGCTGATCATTCAGATATGGGACAAT GACAAGTTTTCCCTGGACGACTACTTGGGTTTTCTGGAACTTGACTTACATCGTACGATCATCCCAGCCA AGACATCAGAGAAATGCAGTTTGGACATGATTCCAGACCTCAAAGCCATGGACCCTCTTAAAGCTAAGAC TGCCTCACTCTTTGAACAGAGGTCCATGAAAGGATGGTGGCCGTGCTACGCAGACAAAGATGGCACCCGG GTGATGGCTGGGAAAGTGGAGATGACACTGGAGGTGCTCAACGAGAGGGAGGCCGACGAGAGGCCAGCCG GGAAGGGGCGGAGTGAACCCAACATGAACCCCAAGCTTGACCCACCAAACCGACCGGAAACCTCCTTCCT CTGGTTCACGAACCCTTGCAAGACCATGCGCTTCATCGTGTGGCGCCGGTTCAAGTGGGTGATCATCGGC CTGCTTCTGCTGCTCATCCTGTTGCTGTTCGTGGCTGTGCTCCTGTACTCTCTTCCGAACTATTTATCAA TGAAGATTGTGAGGCCGAATGCATAG
Translation (2061 aa): MLRVIVESATNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDSSSSLVIVVK DFETIGQNKLIGTATVSLKDLIGDQNRSLPYKQTSLLNEKGQDTGATIDLVIGYTPPSAPHPNDPSGTSV PGMGEEEEEDQGDEDRVDGIVRGPGPKGPSGTVSEAQLARRITKGKSSRRMLSNKPQDFQIRVRVIEGRQ LCGNNIRPVVKVHICGQTHRTRIKRGNNPFFDELFFYNVHITPSELMDEIISIRVYNSHSLRADCLMGEF KIDVGFVYDEPGHAVMRKWLLLNDPEDTSSGAKGYMKVSMFVLGTGDEPPPEKRDRDNDSDDVESNLLLP AGIALRWVTFMLKIYRAEDIPQMDDAFSQTVKEIFGGNADKKNLVDPFVEVSFAGKKVCTNIIERNANPE WNQVVNLQIKFPSMCEKIKLTVYDWDRLTKNDVVGTTYLYLSKIAASGGEVEDFSSSGAGAASYTATTGE TEVGFVPTFGPCYLNLYGSPREYTGFPDPYDELNSGKGEGVAYRGRIFVELNTFLEKKPPEKKLEPISSD DLLVVEKYQRRRKYSLSAVFHSATMLQDVGEAIQFEVSIGNYGNKFDATCKPLASTTQYSRAVFDGNYYY YLPWAHTKPVVTLTSYWEDISHRLDAVNTLLVMAERLQSNIEAVKSGIQGKIPANQLAEVWLKLIDEVIE DTRYTLPVTEGKANVTVLDTQIRKLRSRFLSQIHEAALRMRSEATDVKSTLLEIEEWLDKLMQLTEEPQN SMPDIIIWMIRGEKRLAYARIPAHQVLYSTSGGNASGKYCGKTQTILLKYPQEKTNGPKVPVELRVNIWL GLSAVEKKFNSFAEGTFTVFAEMYENQALVFGKWGTSGLVGRHKFSDVTGKIKLKREFFLPPKGWEWEGD WVVDPERSLLTEADAGHTEFTDEVYQNENRYPGGEWKQAEDTYTDANGDKAASPSEMTCPPGWEWEDDAW IYDINRAVDEKGWEYGITIPPDNKPKSWVAAEKMYHTHRRRRLVRKRKKDLTQTASSTARAMEELEDREG WEYASLIGWKFHWKQRSSDTFRRRRWRRKMAPSETHGAAAIFKLEGALGADTTEDGEEKGPEKQKHSATT VFGANTPIVSCNFDRVYIYHLRCYIYQARNLMALDKDSFSDPYAHVSFLHRSKTTEIIHSTLNPTWDQTI IFDEVEIFGEPQTVLQNPPNVTIELFDNDQVGKDEFLGRSICSPLVKLNSETDITPKLLWHPVMNGDKAC GDVLVTAELILRNKDGSNLPILPSQRAPNLYMVPQGIRPVVQLTAIEILAWGLRNMKNYQMASVTSPSLV VECGGERVESVVIKSLKKTPNFPSSVLFMKVFLPKEELYMPPLVIKVIDHRQFGRKPVVGQCTIDHLDRF RCDPYAGKEDIVPQLKASLMSAPPCREVVIEIEDTKPLLASKLSEKEEEIVDWWSKFYASSGEHEKCGQY IQKGYSKLKIYDCELEDVADFEGLTDFSDTFKLYRGKSDENEDPSVVGEFKGSFRIYPLPDDPSVPAPPR QFRELPDSVPQECTVRIYIVQGLQLQPQDNNGLCDPYIKITLGKKVIEDRDHYIPNTLNPVFGRMYELSC YLPQEKDLKISVYDYDTFTRDEKVGETTIDLENRFLSRFGSHCGIPEQYCVSGVNTWRDQLRPTQLLQNV ARFKGFPPPVLSEDGSRIRYGGRDYHLDEFEANKILHQHLGAPEERLALHILRTQGLVPEHVETRTLHST FQPNISQGKLQMWVDVFPKSLGPPGPPFNITPRKAKKYYLRVIIWNTKDVILDEKSITGEDMSDIYVKGW ISGSEENKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEQLCIVAKKEHFWSIDQTEFRVPPRLIIQIWDN DKFSLDDYLGFLELDLHRTIIPAKTSEKCSLDMIPDLKAMDPLKAKTASLFEQRSMKGWWPCYADKDGTR VMAGKVEMTLEVLNEREADERPAGKGRSEPNMNPKLDPPNRPETSFLWFTNPCKTMRFIVWRRFKWVIIG LLLLLILLLFVAVLLYSLPNYLSMKIVRPNA
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