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Report for CCDS9002.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9002.1 Public Homo sapiens 12 TMEM19 24 110 108 CCDS HistoryNCBI Gene:55266Re-query CCDS DB by CCDS ID:9002.1Re-query CCDS DB by GeneID:55266See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9002.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266673.10 ENSP00000266673.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000266673.10Link to Ensembl Protein Viewer:ENSP00000266673.5Re-query CCDS DB by Nucleotide ID:ENST00000266673Re-query CCDS DB by Protein ID:ENSP00000266673
Original member Current member NCBI NM_018279.4 NP_060749.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018279.4Link to Protein Sequence:NP_060749.2Re-query CCDS DB by Nucleotide ID:NM_018279Re-query CCDS DB by Protein ID:NP_060749Link to BLAST:NP_060749.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060749.2 336 Q96HH6-1 336 100% 0 0

Chromosomal Locations for CCDS 9002.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 71686681 71686810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 71689591 71689704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 71696436 71696573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 71697280 71697534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 71698900 71699109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 71700832 71700995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1011 nt):
ATGACAGATCTTAACGACAATATATGCAAAAGATATATAAAGATGATAACTAATATAGTTATACTGAGCC
TGATCATTTGCATTTCGTTAGCTTTCTGGATTATATCAATGACTGCAAGCACCTATTATGGTAACTTACG
ACCTATTTCTCCGTGGCGTTGGCTGTTTTCTGTTGTTGTTCCTGTTCTGATCGTCTCTAATGGCCTTAAA
AAGAAAAGTCTAGATCACAGTGGGGCTCTAGGAGGGCTAGTCGTTGGATTTATCCTAACCATTGCAAATT
TCAGCTTTTTTACCTCTTTGCTGATGTTTTTCTTGTCTTCTTCGAAACTCACTAAATGGAAGGGAGAAGT
GAAGAAGCGTCTAGATTCAGAATATAAGGAAGGTGGGCAAAGGAATTGGGTTCAGGTGTTCTGTAATGGA
GCTGTACCCACAGAACTGGCCCTGCTGTACATGATAGAAAATGGCCCCGGGGAAATCCCAGTCGATTTTT
CCAAGCAGTACTCCGCTTCCTGGATGTGTTTGTCTCTCTTGGCTGCACTGGCCTGCTCTGCTGGAGACAC
ATGGGCTTCAGAAGTTGGCCCAGTTCTGAGTAAAAGTTCTCCAAGACTGATAACAACCTGGGAGAAAGTT
CCAGTTGGTACCAATGGAGGAGTTACAGTGGTGGGCCTTGTCTCCAGTCTCCTTGGTGGTACCTTTGTGG
GCATTGCATACTTCCTCACACAGCTGATTTTTGTGAATGATTTAGACATTTCTGCCCCGCAGTGGCCAAT
TATTGCATTTGGTGGTTTAGCTGGATTACTAGGATCAATTGTGGACTCATACTTAGGGGCTACAATGCAG
TATACTGGGTTGGATGAAAGCACTGGCATGGTGGTCAACAGCCCAACAAATAAGGCAAGGCACATAGCAG
GGAAACCCATTCTTGATAACAACGCAGTGAATCTGTTTTCTTCTGTTCTTATTGCCCTCTTGCTCCCAAC
TGCTGCTTGGGGTTTTTGGCCCAGGGGGTGA

Translation (336 aa):
MTDLNDNICKRYIKMITNIVILSLIICISLAFWIISMTASTYYGNLRPISPWRWLFSVVVPVLIVSNGLK
KKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWKGEVKKRLDSEYKEGGQRNWVQVFCNG
AVPTELALLYMIENGPGEIPVDFSKQYSASWMCLSLLAALACSAGDTWASEVGPVLSKSSPRLITTWEKV
PVGTNGGVTVVGLVSSLLGGTFVGIAYFLTQLIFVNDLDISAPQWPIIAFGGLAGLLGSIVDSYLGATMQ
YTGLDESTGMVVNSPTNKARHIAGKPILDNNAVNLFSSVLIALLLPTAAWGFWPRG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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