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Report for CCDS90126.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90126.1 Public Mus musculus 6 Klrb1b 23 108 98 CCDS HistoryNCBI Gene:80782Re-query CCDS DB by CCDS ID:90126.1Re-query CCDS DB by GeneID:80782See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90126.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000172887.7 ENSMUSP00000134637.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000172887.7Link to Ensembl Protein Viewer:ENSMUSP00000134637.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000172887Re-query CCDS DB by Protein ID:ENSMUSP00000134637
Original member Current member NCBI NM_001364615.1 NP_001351544.1 Accepted alive Link to Nucleotide Sequence:NM_001364615.1Link to Protein Sequence:NP_001351544.1Re-query CCDS DB by Nucleotide ID:NM_001364615Re-query CCDS DB by Protein ID:NP_001351544Link to BLAST:NP_001351544.1

Chromosomal Locations for CCDS 90126.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 128815295 128815318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128818913 128819067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128820265 128820336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128820942 128821040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128826159 128826246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGGATTCAACAACACTGGTCTATGCAGATTTAAACCTAGCCAGGATCCAAGAACCTAAGCATGATTCAC
CTCCATCTCTTTCCCCAGACACCTGTCGGTGCCCTCGCTGGCATCGGTTGGCTCTGAAATTTGGCTGTGC
TGGCCTCATCCTTCTTGTGCTGGTCGTGATTGGACTCTGTGTCTTGGTGCTATCAGTACAAAAATCATCA
GTACAAAAAATCTGCGCGGATGTTCAAGAGAACAGAACACATACAACAGGTTGTTCAGCTAAGCTAGAGT
GCCCACAAGACTGGCTTTCACACCGAGATAAGTGCTTTCACGTTTCTCAAGTTTCCAACACTTGGAAGGA
ATGTCGAATTGATTGTGATAAAAAAGGAGCCACTTTGCTGCTCATTCAAGACCAAGAAGAACTGACTAAA
AATCACTGGTGTCACTGA

Translation (145 aa):
MDSTTLVYADLNLARIQEPKHDSPPSLSPDTCRCPRWHRLALKFGCAGLILLVLVVIGLCVLVLSVQKSS
VQKICADVQENRTHTTGCSAKLECPQDWLSHRDKCFHVSQVSNTWKECRIDCDKKGATLLLIQDQEELTK
NHWCH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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