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Report for CCDS90150.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
90150.1 |
Public |
Mus musculus |
7 |
Leng8 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:232798](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:90150.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:232798](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 90150.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000121270.7 |
ENSMUSP00000112428.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000121270.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000112428.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000121270](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000112428](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
|
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001374609.1 |
NP_001361538.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001374609.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001361538.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001374609](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001361538](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001361538.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 90150.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2406 nt): ATGGCGGCCAACGTGGGTGATCAGCGTGCTGCAGACTGGTCTTCTCAGTACAGCATGGTGACTGGGAACA GCAGAGAAAATGGCATGGAGACTCCTATGCACGAGAACCCAGAGTGGGAGAAGGCCCGCCAGGCCCTGGC CAGCATCAGCAAAGCAGGGGCTACCAGCAGTTCCAAAGCCAGCAGCAGTGGTCCTGTGGCCAGTGCACAA TACGTCTCTCAGGCAGAAGCCTCTGCTTTGCAGCAGCAGCAGCAACAATACTACCAGTGGTACCAGCAGT ACAACTATGCCTATCCGTATAGCTACTACTACCCCATGAGCATGTACCAGAGCTATGGCTCCCCCTCCCA GTATGGGATGGCCAGCTCCTACGGCTCAGCTACAGCCCAGCAGCCATCGGCTCCCCAGCACCAAGGGACT CTGAACCAGCCTCCAGTCCCTGGCATGGATGAGAGTATGGCCTACCAGGCTTCCCCTCAGCAGCTACCTG CAGCTCAGCCCCCTCAGCCCTCAAACTCACAACATGGGACACATAGTCTAAGCAACGGCCCTCAGCCTGG GACAGCCCCAAGCACTCAGCACAGTCAGGCCGGGGCTCCTACAGGGCAGGCATATGGGCCACACAGCTAC AGCGAGCCTGCCAAACCTAAGAAGGGTCAGCAGTTATGGACCCGCATGAAACCAGCCCCTGGGACTGGGG GTCTAAAATTTAACATCCAGAAGCGGCCCTTTGCTGTCACCAGCCAGAGCTTCAGCTCCAATTCAGAGGG CCAACACAGCAGCTTTGGGCCCCAGCCCAACTCGGAGAACACTCAGAACCGCAGTGGACCTTCTGGCCGG GGAAACCTGTCTGGGAAGCCAGATGATTGGCCTCAGGATATGAAGGAATATGTGGAACGGTGTTTCACCG CCTGCGAGTCAGAAGAGGACAAGGACCGGACAGAGAAACTGCTCAAGGAGGTGCTACAGGCCCGGCTCCA GGATGGCTCTGCCTACACCATCGACTGGAGCCGAGAGCCTCTGCCTGGGCTGACCAGGGAGCCTGTGGCT GAGAGCCCCAAGAAGAAGCGGTGGGAGGCCCCTAGCAGCCTTCACCCTTCCAGGGGGGCAGGCTCGGTGA CCAGGGGCGGGGGTGCCCAATCCCAGCGAGGGACACCTGGGGCTGGGGGTGCTGGCCGAGCTCGGGGTAG CAGCTTCACCAAGTTCGGCAACCGCAACGTCTTCATGAAGGATAACAGCTCTTCCTCCAGCACGGATTCA CGCTCCCGCTCCTCATCCAGGTCTCCCACGAGACACTTTCGGAGAAGTGACTCCCATTCAGACTCTGACA GCTCCTACTCAGGGAATGAGTGCCACCCTGTAGGCCGCAGGAACCCACCCCCCAAGGGTCGGGGTGGTCG AGGGGCCCACATGGATCGAGGTCGGGGCAGGGCGCAGCGTGGAAAGAGACATGACCTAGCTCCCACCAAA CGTAGCCGCAAGAAGATGGCAGCACTGGAGTGCGAGGACCCAGAGCGTGAGCTTAAGAAGCAAAAGAGGG CAGCCCGCTTCCAACATGGGCACTCACGTCGCCTGCGCCTTGAACCTTTGGTGCTACAGATGAGTAACCT GGAGAGCAGTGGAGCTGACCCTGACTGGCAGGAGCTGCAGATTGTGGGCACCTGTCCTGACATTACAAAG CACTATCTGCGGCTCACCTGCGCCCCAGACCCGTCAACTGTGCGACCTGTGGCTGTTTTGAAGAAGTCTC TGTGCATGGTCAAGTCCCACTGGAAGGAGAAGCAGGACTATGCCTTTGCCTGTGAGCAGATGAAGTCCAT TCGGCAGGACCTGACAGTGCAAGGCATCCGGACGGAGTTCACTGTGGAGGTGTATGAGACCCATGCCCGC ATTGCCTTGGAGAAGGGTGACCATGAAGAATTCAACCAGTGCCAAACACAGCTTAAGTCACTGTACGCGG AAAACTTAGCAGGCAATGTGGGTGAATTTACTGCATACCGAATCCTCTACTACATCTTCACCAAGAACTC TGGAGACATCACTACGGAACTGGCATACCTCACAAGGGAGATGAAGGCAGACCCCTGCGTGGCCCACGCG TTGGCACTGAGGGCAGCCTGGGCCCTGGGCAACTACCACCGCTTCTTCAGGCTCTATTGCCATGCACCTT GCATGTCTGGCTACCTTGTGGACAAGTTTGCAGACCGGGAGCGCAAGGCCGCCCTCAAGGCCATGATCAA AACCTTCCGCCCTGCGCTGCCCGTCTCCTACCTGCAGGCCGAGTTGGCCTTCGAGGGCGAGGCCGCCTGC CGGGCCTTCCTAGAGCCCTTGGGCCTGTCCTACACGGGCCCGGACAACTCCAGCGTGGACTGCCGCCTCA GCCTGGCGCAGCTGCCAGCCTTCTAA
Translation (801 aa): MAANVGDQRAADWSSQYSMVTGNSRENGMETPMHENPEWEKARQALASISKAGATSSSKASSSGPVASAQ YVSQAEASALQQQQQQYYQWYQQYNYAYPYSYYYPMSMYQSYGSPSQYGMASSYGSATAQQPSAPQHQGT LNQPPVPGMDESMAYQASPQQLPAAQPPQPSNSQHGTHSLSNGPQPGTAPSTQHSQAGAPTGQAYGPHSY SEPAKPKKGQQLWTRMKPAPGTGGLKFNIQKRPFAVTSQSFSSNSEGQHSSFGPQPNSENTQNRSGPSGR GNLSGKPDDWPQDMKEYVERCFTACESEEDKDRTEKLLKEVLQARLQDGSAYTIDWSREPLPGLTREPVA ESPKKKRWEAPSSLHPSRGAGSVTRGGGAQSQRGTPGAGGAGRARGSSFTKFGNRNVFMKDNSSSSSTDS RSRSSSRSPTRHFRRSDSHSDSDSSYSGNECHPVGRRNPPPKGRGGRGAHMDRGRGRAQRGKRHDLAPTK RSRKKMAALECEDPERELKKQKRAARFQHGHSRRLRLEPLVLQMSNLESSGADPDWQELQIVGTCPDITK HYLRLTCAPDPSTVRPVAVLKKSLCMVKSHWKEKQDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHAR IALEKGDHEEFNQCQTQLKSLYAENLAGNVGEFTAYRILYYIFTKNSGDITTELAYLTREMKADPCVAHA LALRAAWALGNYHRFFRLYCHAPCMSGYLVDKFADRERKAALKAMIKTFRPALPVSYLQAELAFEGEAAC RAFLEPLGLSYTGPDNSSVDCRLSLAQLPAF
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